Protein–RNA interactions for Protein: P28660

Nckap1, Nck-associated protein 1, mousemouse

Known RBP Predictions only

Length 1,128 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nckap1P28660 Cnn1-203ENSMUST00000214601 1225 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Nckap1P28660 Txndc5-201ENSMUST00000035988 2843 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.37
Nckap1P28660 Anks1b-217ENSMUST00000182550 1868 ntTSL 5 BASIC17.39■□□□□ 0.37
Nckap1P28660 Ctsh-201ENSMUST00000034915 1617 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Nckap1P28660 Col9a3-203ENSMUST00000132527 3046 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.37
Nckap1P28660 Erlin1-202ENSMUST00000112028 3136 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Nckap1P28660 Gm43231-201ENSMUST00000202960 2258 ntBASIC17.38■□□□□ 0.37
Nckap1P28660 Necab3-202ENSMUST00000109716 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
Nckap1P28660 Mrpl10-201ENSMUST00000001485 1708 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Nckap1P28660 Wac-207ENSMUST00000167020 5208 ntAPPRIS P3 TSL 1 (best) BASIC17.38■□□□□ 0.37
Nckap1P28660 Itm2c-203ENSMUST00000185569 1465 ntTSL 5 BASIC17.38■□□□□ 0.37
Nckap1P28660 Ssu72-201ENSMUST00000030905 1472 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Nckap1P28660 Krt82-201ENSMUST00000023713 2087 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Nckap1P28660 Fxr2-201ENSMUST00000018909 2951 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Nckap1P28660 Dnaja4-202ENSMUST00000120452 1827 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Nckap1P28660 Snx3-202ENSMUST00000105499 1057 ntTSL 5 BASIC17.38■□□□□ 0.37
Nckap1P28660 Mycl-202ENSMUST00000106252 3293 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Nckap1P28660 Dolk-201ENSMUST00000100219 2104 ntAPPRIS P1 BASIC17.38■□□□□ 0.37
Nckap1P28660 Krt80-201ENSMUST00000077196 1774 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Nckap1P28660 Mprip-203ENSMUST00000108751 4021 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Nckap1P28660 Ccdc102a-201ENSMUST00000077955 2304 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Nckap1P28660 Gm6627-201ENSMUST00000218299 2386 ntBASIC17.37■□□□□ 0.37
Nckap1P28660 Dio3-202ENSMUST00000173014 2030 ntAPPRIS P1 BASIC17.37■□□□□ 0.37
Nckap1P28660 Gm7638-201ENSMUST00000121348 967 ntBASIC17.37■□□□□ 0.37
Nckap1P28660 Ccdc125-202ENSMUST00000170347 1216 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Nckap1P28660 Prok1-201ENSMUST00000049852 813 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Nckap1P28660 Ripply2-201ENSMUST00000058846 503 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Nckap1P28660 Wisp2-201ENSMUST00000029188 1719 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Nckap1P28660 Rab11fip5-202ENSMUST00000204087 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Nckap1P28660 Dus1l-202ENSMUST00000106133 1762 ntAPPRIS ALT2 TSL 5 BASIC17.37■□□□□ 0.37
Nckap1P28660 Ppp1r21-201ENSMUST00000038551 3141 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Nckap1P28660 Zfpm1-201ENSMUST00000054052 3390 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Nckap1P28660 Cebpa-201ENSMUST00000042985 2626 ntAPPRIS P1 BASIC17.36■□□□□ 0.37
Nckap1P28660 Smtnl2-201ENSMUST00000050226 2624 ntAPPRIS P2 TSL 1 (best) BASIC17.36■□□□□ 0.37
Nckap1P28660 Cacna1a-201ENSMUST00000121390 7926 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
Nckap1P28660 Cacnb1-204ENSMUST00000107561 1778 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Nckap1P28660 Hs3st5-202ENSMUST00000167191 2408 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Nckap1P28660 Gm1673-202ENSMUST00000114382 451 ntAPPRIS ALT2 TSL 2 BASIC17.36■□□□□ 0.37
Nckap1P28660 Bola2-203ENSMUST00000130498 1266 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Nckap1P28660 Gm42477-201ENSMUST00000202427 469 ntTSL 3 BASIC17.36■□□□□ 0.37
Nckap1P28660 Gm18101-201ENSMUST00000215769 548 ntBASIC17.36■□□□□ 0.37
Nckap1P28660 Bdkrb1-202ENSMUST00000182899 1313 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
Nckap1P28660 Bdkrb1-201ENSMUST00000041229 1338 ntAPPRIS P1 BASIC17.36■□□□□ 0.37
Nckap1P28660 Coq5-201ENSMUST00000040421 2037 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Nckap1P28660 Rbm43-201ENSMUST00000102767 2057 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Nckap1P28660 Mtcl1-201ENSMUST00000086693 7221 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
Nckap1P28660 Rnf157-201ENSMUST00000100202 4619 ntAPPRIS P2 TSL 1 (best) BASIC17.36■□□□□ 0.37
Nckap1P28660 Krt19-201ENSMUST00000007317 1576 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Nckap1P28660 Pigu-201ENSMUST00000077626 1636 ntAPPRIS P2 TSL 1 (best) BASIC17.36■□□□□ 0.37
Nckap1P28660 Stk11-201ENSMUST00000003152 2566 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
Nckap1P28660 Scamp4-201ENSMUST00000079883 1804 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Nckap1P28660 Magi3-203ENSMUST00000122303 3827 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
Nckap1P28660 Ppfia1-201ENSMUST00000168134 5181 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
Nckap1P28660 Paox-202ENSMUST00000097967 1024 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Nckap1P28660 Zfp800-203ENSMUST00000115321 2699 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Nckap1P28660 Srcin1-203ENSMUST00000107596 7054 ntAPPRIS P2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Nckap1P28660 Aire-204ENSMUST00000128241 1938 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
Nckap1P28660 Aire-205ENSMUST00000130972 1923 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Nckap1P28660 Aire-212ENSMUST00000145975 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Nckap1P28660 Aire-201ENSMUST00000019257 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Nckap1P28660 Adamtsl5-201ENSMUST00000095446 1957 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
Nckap1P28660 Fez2-202ENSMUST00000112487 2020 ntAPPRIS ALT1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Nckap1P28660 Phldb3-201ENSMUST00000073325 2273 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
Nckap1P28660 Mpig6b-201ENSMUST00000097337 2252 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Nckap1P28660 S1pr4-201ENSMUST00000053646 2386 ntAPPRIS P1 BASIC17.35■□□□□ 0.37
Nckap1P28660 Ankrd63-201ENSMUST00000104937 4861 ntAPPRIS P1 BASIC17.35■□□□□ 0.37
Nckap1P28660 Nbn-201ENSMUST00000029879 2533 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Nckap1P28660 Col27a1-201ENSMUST00000036300 7612 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Nckap1P28660 Glra1-203ENSMUST00000108853 1797 ntTSL 5 BASIC17.34■□□□□ 0.37
Nckap1P28660 Gm16061-201ENSMUST00000122167 857 ntBASIC17.34■□□□□ 0.37
Nckap1P28660 Gm13474-201ENSMUST00000122466 815 ntBASIC17.34■□□□□ 0.37
Nckap1P28660 Tppp3-201ENSMUST00000014990 1127 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Nckap1P28660 A730015C16Rik-201ENSMUST00000164855 1221 ntAPPRIS P1 BASIC17.34■□□□□ 0.37
Nckap1P28660 Gm17484-201ENSMUST00000167899 2322 ntTSL 2 BASIC17.34■□□□□ 0.37
Nckap1P28660 Gm23634-201ENSMUST00000175071 91 ntBASIC17.34■□□□□ 0.37
Nckap1P28660 Gm38342-201ENSMUST00000195710 2980 ntBASIC17.34■□□□□ 0.37
Nckap1P28660 A430033K04Rik-204ENSMUST00000200521 1110 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Nckap1P28660 AC134329.2-201ENSMUST00000217897 428 ntBASIC17.34■□□□□ 0.37
Nckap1P28660 Gm18032-201ENSMUST00000222541 538 ntBASIC17.34■□□□□ 0.37
Nckap1P28660 A430033K04Rik-201ENSMUST00000032590 1109 ntTSL 5 BASIC17.34■□□□□ 0.37
Nckap1P28660 Kctd13-201ENSMUST00000032924 1676 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Nckap1P28660 Lsm10-201ENSMUST00000055575 943 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Nckap1P28660 Plk3-201ENSMUST00000076859 2378 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Nckap1P28660 Zc3h15-201ENSMUST00000081591 2111 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Nckap1P28660 Ulk1-201ENSMUST00000031490 5213 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.37
Nckap1P28660 Gm6093-201ENSMUST00000221792 1623 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
Nckap1P28660 Mrpl9-201ENSMUST00000029786 1612 ntAPPRIS P2 TSL 1 (best) BASIC17.33■□□□□ 0.37
Nckap1P28660 Mycbp-202ENSMUST00000106202 1536 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
Nckap1P28660 Larp1b-206ENSMUST00000191872 1505 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.37
Nckap1P28660 Lmo4-203ENSMUST00000121796 1417 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Nckap1P28660 Rogdi-207ENSMUST00000202281 1355 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Nckap1P28660 Tlcd2-202ENSMUST00000108435 1112 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
Nckap1P28660 Gm22697-201ENSMUST00000175194 63 ntBASIC17.33■□□□□ 0.36
Nckap1P28660 Cebpg-201ENSMUST00000070191 914 ntAPPRIS P1 TSL 2 BASIC17.33■□□□□ 0.36
Nckap1P28660 Hist1h2aj-201ENSMUST00000091710 352 ntBASIC17.33■□□□□ 0.36
Nckap1P28660 Fbxo30-201ENSMUST00000070300 2492 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Nckap1P28660 Ppp1r3g-203ENSMUST00000225537 2389 ntAPPRIS P1 BASIC17.33■□□□□ 0.36
Nckap1P28660 Prkaca-201ENSMUST00000005606 2276 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Nckap1P28660 Senp2-201ENSMUST00000023561 4499 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Nckap1P28660 Ppp1r13b-201ENSMUST00000054815 4389 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Retrieved 100 of 76,532 protein–RNA pairs in 43.7 ms