Protein–RNA interactions for Protein: P27784

Ccl6, C-C motif chemokine 6, mousemouse

Predictions only

Length 116 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccl6P27784 Fam57a-201ENSMUST00000094014 2130 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Ccl6P27784 Lhfpl4-201ENSMUST00000162280 4762 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Ccl6P27784 Lrrfip2-202ENSMUST00000098340 3191 ntAPPRIS P2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Ccl6P27784 Uso1-201ENSMUST00000031355 3898 ntAPPRIS P2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Ccl6P27784 Cdh2-201ENSMUST00000025166 4843 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Ccl6P27784 Fam213a-202ENSMUST00000118466 1567 ntAPPRIS ALT1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Ccl6P27784 Ppp2r5d-201ENSMUST00000002839 2926 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Ccl6P27784 Espn-209ENSMUST00000105655 1350 ntTSL 5 BASIC13.62□□□□□ -0.23
Ccl6P27784 Paqr3-201ENSMUST00000069453 1375 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Ccl6P27784 Nup85-201ENSMUST00000021085 2230 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Ccl6P27784 Hmg20b-201ENSMUST00000020454 1621 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Ccl6P27784 Ngb-201ENSMUST00000021420 1616 ntAPPRIS P3 TSL 1 (best) BASIC13.62□□□□□ -0.23
Ccl6P27784 Bcr-201ENSMUST00000164107 6839 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Ccl6P27784 Sdr39u1-201ENSMUST00000111325 1255 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Ccl6P27784 Grk6-201ENSMUST00000001115 2994 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Ccl6P27784 Mrps10-203ENSMUST00000119945 1018 ntAPPRIS P4 TSL 1 (best) BASIC13.62□□□□□ -0.23
Ccl6P27784 6230400D17Rik-202ENSMUST00000224976 1019 ntBASIC13.62□□□□□ -0.23
Ccl6P27784 B3galnt2-204ENSMUST00000221300 2397 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Ccl6P27784 Tor3a-207ENSMUST00000188964 1750 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Ccl6P27784 Zdhhc6-201ENSMUST00000076891 2263 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Ccl6P27784 Nfe2l1-202ENSMUST00000107657 3869 ntAPPRIS P3 TSL 5 BASIC13.62□□□□□ -0.23
Ccl6P27784 Dio3-201ENSMUST00000097228 1449 ntBASIC13.62□□□□□ -0.23
Ccl6P27784 Yipf2-201ENSMUST00000034700 2174 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Ccl6P27784 Pik3r2-201ENSMUST00000034296 3165 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Ccl6P27784 Cep104-201ENSMUST00000047497 5151 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Ccl6P27784 Camsap3-212ENSMUST00000208240 2572 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Ccl6P27784 Stard3-201ENSMUST00000018311 2070 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Ccl6P27784 Gm26657-201ENSMUST00000181745 1308 ntAPPRIS P1 BASIC13.62□□□□□ -0.23
Ccl6P27784 Lrch4-204ENSMUST00000176667 2209 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Ccl6P27784 Acbd4-203ENSMUST00000107040 1959 ntTSL 2 BASIC13.62□□□□□ -0.23
Ccl6P27784 Ubfd1-201ENSMUST00000033158 4849 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Ccl6P27784 Tmem131l-201ENSMUST00000052342 4815 ntAPPRIS ALT2 TSL 5 BASIC13.61□□□□□ -0.23
Ccl6P27784 Slc25a26-201ENSMUST00000061118 1922 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Ccl6P27784 Tmem198-201ENSMUST00000050899 2456 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Ccl6P27784 Gm11769-201ENSMUST00000140273 1657 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Ccl6P27784 Ruvbl1-201ENSMUST00000032165 1675 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Ccl6P27784 Gm16475-201ENSMUST00000207306 512 ntTSL 2 BASIC13.61□□□□□ -0.23
Ccl6P27784 Grp-201ENSMUST00000025395 862 ntAPPRIS P2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Ccl6P27784 Tmem126a-201ENSMUST00000032844 799 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Ccl6P27784 1700028I16Rik-201ENSMUST00000076984 1048 ntTSL 5 BASIC13.61□□□□□ -0.23
Ccl6P27784 Ttpal-202ENSMUST00000109408 1999 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Ccl6P27784 Cspg5-205ENSMUST00000199736 2107 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Ccl6P27784 Sox4-201ENSMUST00000067230 4795 ntAPPRIS P1 BASIC13.61□□□□□ -0.23
Ccl6P27784 AC108858.1-201ENSMUST00000228461 1498 ntBASIC13.61□□□□□ -0.23
Ccl6P27784 Ankrd63-201ENSMUST00000104937 4861 ntAPPRIS P1 BASIC13.61□□□□□ -0.23
Ccl6P27784 Aire-204ENSMUST00000128241 1938 ntAPPRIS P3 TSL 1 (best) BASIC13.6□□□□□ -0.23
Ccl6P27784 Aire-205ENSMUST00000130972 1923 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Ccl6P27784 Aire-212ENSMUST00000145975 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Ccl6P27784 Aire-201ENSMUST00000019257 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Ccl6P27784 Cadps2-212ENSMUST00000163871 4969 ntAPPRIS ALT2 TSL 5 BASIC13.6□□□□□ -0.23
Ccl6P27784 Srrm2-209ENSMUST00000190686 8864 ntAPPRIS P1 TSL 5 BASIC13.6□□□□□ -0.23
Ccl6P27784 Plekhf1-201ENSMUST00000098513 5263 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Ccl6P27784 A230050P20Rik-201ENSMUST00000043911 1683 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Ccl6P27784 Tmem196-201ENSMUST00000058644 1678 ntAPPRIS P1 TSL 5 BASIC13.6□□□□□ -0.23
Ccl6P27784 Sncaip-205ENSMUST00000178011 3433 ntAPPRIS P3 TSL 1 (best) BASIC13.6□□□□□ -0.23
Ccl6P27784 H13-204ENSMUST00000125366 5204 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Ccl6P27784 Gm11249-201ENSMUST00000117071 859 ntBASIC13.6□□□□□ -0.23
Ccl6P27784 Gm6270-201ENSMUST00000132731 559 ntTSL 5 BASIC13.6□□□□□ -0.23
Ccl6P27784 AA465934-203ENSMUST00000177150 383 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Ccl6P27784 Gm20049-201ENSMUST00000219950 730 ntBASIC13.6□□□□□ -0.23
Ccl6P27784 CT025689.6-201ENSMUST00000224991 1104 ntBASIC13.6□□□□□ -0.23
Ccl6P27784 Prss12-201ENSMUST00000029603 2602 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Ccl6P27784 Crybb1-201ENSMUST00000031286 882 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Ccl6P27784 Trpc4ap-201ENSMUST00000041059 3204 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Ccl6P27784 Hist1h2ap-201ENSMUST00000081342 482 ntAPPRIS P1 BASIC13.6□□□□□ -0.23
Ccl6P27784 Ptprj-204ENSMUST00000168621 7634 ntAPPRIS P4 TSL 1 (best) BASIC13.6□□□□□ -0.23
Ccl6P27784 Cbarp-201ENSMUST00000105369 3121 ntAPPRIS P2 TSL 5 BASIC13.6□□□□□ -0.23
Ccl6P27784 Fam172a-202ENSMUST00000099358 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Ccl6P27784 Rab6b-201ENSMUST00000035155 5007 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Ccl6P27784 Cox18-201ENSMUST00000048363 1333 ntAPPRIS P3 TSL 1 (best) BASIC13.6□□□□□ -0.23
Ccl6P27784 Fbxo33-201ENSMUST00000043204 3688 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Ccl6P27784 Coro2a-202ENSMUST00000107756 4154 ntAPPRIS P3 TSL 1 (best) BASIC13.6□□□□□ -0.23
Ccl6P27784 Dut-201ENSMUST00000051605 1950 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Ccl6P27784 Gnao1-201ENSMUST00000034198 2948 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Ccl6P27784 Zbtb8a-201ENSMUST00000030610 2321 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Ccl6P27784 Mbip-201ENSMUST00000021416 1512 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Ccl6P27784 Cacna1c-216ENSMUST00000188522 7338 ntAPPRIS ALT2 TSL 5 BASIC13.59□□□□□ -0.23
Ccl6P27784 Sik3-204ENSMUST00000126865 6287 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Ccl6P27784 Wisp2-201ENSMUST00000029188 1719 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Ccl6P27784 Matk-201ENSMUST00000105328 2228 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Ccl6P27784 Zfp691-202ENSMUST00000106355 1588 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Ccl6P27784 Krt82-201ENSMUST00000023713 2087 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Ccl6P27784 Naa60-212ENSMUST00000186375 2424 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Ccl6P27784 Rbm39-202ENSMUST00000109584 667 ntTSL 5 BASIC13.59□□□□□ -0.23
Ccl6P27784 Mrps18a-202ENSMUST00000123646 621 ntTSL 2 BASIC13.59□□□□□ -0.23
Ccl6P27784 Zfp324-204ENSMUST00000210619 447 ntTSL 3 BASIC13.59□□□□□ -0.23
Ccl6P27784 Gm45894-201ENSMUST00000211940 651 ntTSL 2 BASIC13.59□□□□□ -0.23
Ccl6P27784 A930018P22Rik-201ENSMUST00000040374 822 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Ccl6P27784 Kat2b-ps-201ENSMUST00000128468 2490 ntBASIC13.59□□□□□ -0.23
Ccl6P27784 Gm16712-201ENSMUST00000181962 1960 ntTSL 2 BASIC13.59□□□□□ -0.23
Ccl6P27784 Sart3-201ENSMUST00000019118 4447 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Ccl6P27784 Cdc123-201ENSMUST00000043864 1827 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Ccl6P27784 Foxo3-204ENSMUST00000175881 2535 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Ccl6P27784 Nrl-201ENSMUST00000062232 2504 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Ccl6P27784 Pacsin1-204ENSMUST00000114873 1857 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Ccl6P27784 Camsap2-203ENSMUST00000192314 4916 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Ccl6P27784 Pdgfa-201ENSMUST00000046901 1543 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Ccl6P27784 Ccnd3-215ENSMUST00000183044 2064 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Ccl6P27784 Anks1-202ENSMUST00000088027 6781 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Ccl6P27784 Etnk1-201ENSMUST00000032413 6433 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Retrieved 100 of 76,532 protein–RNA pairs in 30.6 ms