Protein–RNA interactions for Protein: P23440

Pde6b, Rod cGMP-specific 3',5'-cyclic phosphodiesterase subunit beta, mousemouse

Predictions only

Length 856 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pde6bP23440 Trmo-202ENSMUST00000086563 1554 ntAPPRIS P3 TSL 1 (best) BASIC19.02■□□□□ 0.64
Pde6bP23440 Lyl1-201ENSMUST00000037165 1800 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Pde6bP23440 Rbm43-201ENSMUST00000102767 2057 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Pde6bP23440 Agbl4-205ENSMUST00000106591 1406 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.64
Pde6bP23440 Tppp3-201ENSMUST00000014990 1127 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Pde6bP23440 Gm13816-201ENSMUST00000152230 715 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
Pde6bP23440 Mir5130-201ENSMUST00000175160 84 ntBASIC19.02■□□□□ 0.64
Pde6bP23440 Pfdn6-201ENSMUST00000025163 807 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Pde6bP23440 Gm7367-201ENSMUST00000057611 492 ntBASIC19.02■□□□□ 0.64
Pde6bP23440 Eif1b-201ENSMUST00000007139 1035 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Pde6bP23440 Vpreb1-201ENSMUST00000075017 766 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Pde6bP23440 Gm35558-201ENSMUST00000222675 2219 ntBASIC19.02■□□□□ 0.64
Pde6bP23440 Lhx6-205ENSMUST00000112967 3378 ntTSL 1 (best) BASIC19.02■□□□□ 0.63
Pde6bP23440 Gm45623-201ENSMUST00000210744 1457 ntAPPRIS P1 BASIC19.02■□□□□ 0.63
Pde6bP23440 Gm16054-201ENSMUST00000139469 1819 ntTSL 1 (best) BASIC19.02■□□□□ 0.63
Pde6bP23440 Tsks-201ENSMUST00000080233 1806 ntAPPRIS P3 TSL 1 (best) BASIC19.02■□□□□ 0.63
Pde6bP23440 Trim58-201ENSMUST00000075084 2192 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
Pde6bP23440 Ppp1r3g-203ENSMUST00000225537 2389 ntAPPRIS P1 BASIC19.01■□□□□ 0.63
Pde6bP23440 Ncmap-205ENSMUST00000105860 2000 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
Pde6bP23440 Krcc1-203ENSMUST00000204436 1687 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Pde6bP23440 Fjx1-201ENSMUST00000099678 3134 ntAPPRIS P1 BASIC19.01■□□□□ 0.63
Pde6bP23440 Olig2-201ENSMUST00000035608 2437 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Pde6bP23440 Slc25a41-202ENSMUST00000169012 1172 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
Pde6bP23440 Gm28914-201ENSMUST00000188115 667 ntTSL 2 BASIC19.01■□□□□ 0.63
Pde6bP23440 Arpc4-204ENSMUST00000204802 794 ntTSL 3 BASIC19.01■□□□□ 0.63
Pde6bP23440 Grtp1-204ENSMUST00000209691 1030 ntTSL 5 BASIC19.01■□□□□ 0.63
Pde6bP23440 Setdb2-202ENSMUST00000111253 1774 ntTSL 2 BASIC19.01■□□□□ 0.63
Pde6bP23440 Uhmk1-202ENSMUST00000123399 7775 ntTSL 5 BASIC19.01■□□□□ 0.63
Pde6bP23440 Pgf-204ENSMUST00000223220 2080 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
Pde6bP23440 Irx5-201ENSMUST00000034184 2450 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Pde6bP23440 Gm38308-201ENSMUST00000194934 1809 ntBASIC19■□□□□ 0.63
Pde6bP23440 Arid1a-205ENSMUST00000145664 8187 ntAPPRIS ALT2 TSL 2 BASIC19■□□□□ 0.63
Pde6bP23440 Itsn1-205ENSMUST00000113996 5147 ntTSL 5 BASIC19■□□□□ 0.63
Pde6bP23440 Arnt-204ENSMUST00000107160 783 ntTSL 1 (best) BASIC19■□□□□ 0.63
Pde6bP23440 Gm15138-201ENSMUST00000151778 379 ntTSL 1 (best) BASIC19■□□□□ 0.63
Pde6bP23440 Gm23634-201ENSMUST00000175071 91 ntBASIC19■□□□□ 0.63
Pde6bP23440 Gm10575-201ENSMUST00000097947 1671 ntTSL 1 (best) BASIC19■□□□□ 0.63
Pde6bP23440 Dtwd2-201ENSMUST00000025383 2476 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Pde6bP23440 Sqstm1-201ENSMUST00000015981 2673 ntTSL 1 (best) BASIC19■□□□□ 0.63
Pde6bP23440 Synm-205ENSMUST00000208815 2697 ntAPPRIS ALT2 TSL 5 BASIC19■□□□□ 0.63
Pde6bP23440 Ccser1-203ENSMUST00000126214 5657 ntAPPRIS P1 TSL 5 BASIC19■□□□□ 0.63
Pde6bP23440 Wasf3-201ENSMUST00000016143 5196 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Pde6bP23440 Lmo4-203ENSMUST00000121796 1417 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Pde6bP23440 Ppp1r1b-204ENSMUST00000137634 1343 ntTSL 1 (best) BASIC19■□□□□ 0.63
Pde6bP23440 Map6-206ENSMUST00000208605 2275 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
Pde6bP23440 A930024E05Rik-201ENSMUST00000148466 1896 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
Pde6bP23440 Gata5os-201ENSMUST00000069943 1678 ntTSL 2 BASIC18.99■□□□□ 0.63
Pde6bP23440 Eva1c-202ENSMUST00000099543 1554 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
Pde6bP23440 Paqr4-201ENSMUST00000024702 2507 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Pde6bP23440 Sema3c-201ENSMUST00000030568 5491 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Pde6bP23440 Sec61a2-202ENSMUST00000102981 2448 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Pde6bP23440 Gm10418-201ENSMUST00000100943 576 ntBASIC18.99■□□□□ 0.63
Pde6bP23440 Znhit1-203ENSMUST00000111090 698 ntTSL 2 BASIC18.99■□□□□ 0.63
Pde6bP23440 Ccdc125-202ENSMUST00000170347 1216 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
Pde6bP23440 Zfas1-205ENSMUST00000189909 738 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
Pde6bP23440 Gm18032-201ENSMUST00000222541 538 ntBASIC18.99■□□□□ 0.63
Pde6bP23440 Stxbp5-209ENSMUST00000141722 4702 ntAPPRIS P2 TSL 5 BASIC18.99■□□□□ 0.63
Pde6bP23440 Ccdc6-203ENSMUST00000147545 5511 ntAPPRIS P1 TSL 5 BASIC18.99■□□□□ 0.63
Pde6bP23440 Tob1-201ENSMUST00000041589 2288 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Pde6bP23440 Rimklb-201ENSMUST00000068242 4725 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Pde6bP23440 Mzt1-201ENSMUST00000042662 2240 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Pde6bP23440 Hsdl1-201ENSMUST00000036049 3141 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Pde6bP23440 1700096K18Rik-201ENSMUST00000188465 1454 ntBASIC18.98■□□□□ 0.63
Pde6bP23440 Hspa5-202ENSMUST00000100171 2613 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Pde6bP23440 Por-201ENSMUST00000005651 2636 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Pde6bP23440 Cpsf4-207ENSMUST00000162244 1387 ntAPPRIS P4 TSL 1 (best) BASIC18.98■□□□□ 0.63
Pde6bP23440 Gapdh-202ENSMUST00000117757 1273 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
Pde6bP23440 D3Ertd751e-205ENSMUST00000120167 773 ntAPPRIS ALT2 TSL 5 BASIC18.98■□□□□ 0.63
Pde6bP23440 Gm11273-201ENSMUST00000044043 390 ntAPPRIS P1 BASIC18.98■□□□□ 0.63
Pde6bP23440 Prok1-201ENSMUST00000049852 813 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Pde6bP23440 Olfr279-201ENSMUST00000050451 933 ntAPPRIS P1 BASIC18.98■□□□□ 0.63
Pde6bP23440 Sort1-201ENSMUST00000102632 6796 ntAPPRIS P3 TSL 1 (best) BASIC18.98■□□□□ 0.63
Pde6bP23440 Gm11532-201ENSMUST00000128111 5272 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
Pde6bP23440 Tle3-211ENSMUST00000161689 2836 ntTSL 2 BASIC18.98■□□□□ 0.63
Pde6bP23440 Slc25a31-201ENSMUST00000091184 2128 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Pde6bP23440 Rnaseh2a-202ENSMUST00000109736 2981 ntAPPRIS P1 TSL 5 BASIC18.98■□□□□ 0.63
Pde6bP23440 Adgrv1-207ENSMUST00000128585 2580 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
Pde6bP23440 Trmt11-201ENSMUST00000019927 2359 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Pde6bP23440 Tlcd2-202ENSMUST00000108435 1112 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
Pde6bP23440 Tmem57-201ENSMUST00000030628 3826 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Pde6bP23440 Cdca4-201ENSMUST00000062092 2425 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Pde6bP23440 Lrrc14-204ENSMUST00000137649 2832 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Pde6bP23440 Zfp943-202ENSMUST00000153985 1598 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
Pde6bP23440 Myh7b-201ENSMUST00000092995 6163 ntAPPRIS P1 TSL 5 BASIC18.97■□□□□ 0.63
Pde6bP23440 Hmgxb3-201ENSMUST00000091884 5101 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Pde6bP23440 Arf1-202ENSMUST00000163300 1991 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Pde6bP23440 S1pr4-201ENSMUST00000053646 2386 ntAPPRIS P1 BASIC18.97■□□□□ 0.63
Pde6bP23440 Mettl4-ps1-202ENSMUST00000130218 1323 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
Pde6bP23440 Fbxl15-201ENSMUST00000026256 1348 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Pde6bP23440 Psme3-201ENSMUST00000019470 2664 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Pde6bP23440 Notch4-201ENSMUST00000015612 6591 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Pde6bP23440 Trib3-201ENSMUST00000040312 2026 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Pde6bP23440 Atf6b-201ENSMUST00000015605 2566 ntAPPRIS P2 TSL 1 (best) BASIC18.96■□□□□ 0.63
Pde6bP23440 Ssc4d-204ENSMUST00000111153 2745 ntAPPRIS P1 TSL 5 BASIC18.96■□□□□ 0.63
Pde6bP23440 Tor3a-207ENSMUST00000188964 1750 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Pde6bP23440 4933428P19Rik-201ENSMUST00000199616 1376 ntBASIC18.96■□□□□ 0.63
Pde6bP23440 Mycbp-202ENSMUST00000106202 1536 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
Pde6bP23440 Wt1-205ENSMUST00000143043 3090 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
Pde6bP23440 Bean1-204ENSMUST00000171018 3386 ntAPPRIS P4 TSL 1 (best) BASIC18.96■□□□□ 0.63
Pde6bP23440 Smarcc1-207ENSMUST00000199896 5773 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
Retrieved 100 of 76,532 protein–RNA pairs in 34.9 ms