Protein–RNA interactions for Protein: P21237

Bdnf, Brain-derived neurotrophic factor, mousemouse

Predictions only

Length 249 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BdnfP21237 Ostf1-201ENSMUST00000025631 2726 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
BdnfP21237 Macrod2-202ENSMUST00000078027 1669 ntAPPRIS P2 TSL 5 BASIC16.73■□□□□ 0.27
BdnfP21237 Adamtsl5-202ENSMUST00000105352 989 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
BdnfP21237 Speg-206ENSMUST00000122266 917 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
BdnfP21237 4930413G21Rik-201ENSMUST00000205998 993 ntBASIC16.73■□□□□ 0.27
BdnfP21237 Zfp324-204ENSMUST00000210619 447 ntTSL 3 BASIC16.73■□□□□ 0.27
BdnfP21237 Cox14-201ENSMUST00000023761 723 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
BdnfP21237 Dnajb2-201ENSMUST00000055223 1199 ntTSL 5 BASIC16.73■□□□□ 0.27
BdnfP21237 Tmem127-201ENSMUST00000035871 4811 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
BdnfP21237 Gm45412-201ENSMUST00000210217 2275 ntBASIC16.73■□□□□ 0.27
BdnfP21237 Zhx1-202ENSMUST00000110168 5212 ntAPPRIS P1 TSL 5 BASIC16.73■□□□□ 0.27
BdnfP21237 Dusp8-201ENSMUST00000039926 4804 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
BdnfP21237 Zdhhc16-201ENSMUST00000026154 1821 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
BdnfP21237 Aspscr1-205ENSMUST00000106160 1550 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
BdnfP21237 Zfp691-202ENSMUST00000106355 1588 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
BdnfP21237 Ykt6-201ENSMUST00000002818 2541 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
BdnfP21237 Slc47a1-201ENSMUST00000010267 2639 ntAPPRIS P1 TSL 2 BASIC16.72■□□□□ 0.27
BdnfP21237 2210016L21Rik-201ENSMUST00000031538 2607 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
BdnfP21237 Fam57b-207ENSMUST00000207020 1777 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
BdnfP21237 Cdv3-202ENSMUST00000072249 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
BdnfP21237 Ptpre-201ENSMUST00000073961 5410 ntAPPRIS P3 TSL 1 (best) BASIC16.72■□□□□ 0.27
BdnfP21237 Fam110a-204ENSMUST00000109865 1853 ntAPPRIS P1 TSL 2 BASIC16.72■□□□□ 0.27
BdnfP21237 Stk32c-202ENSMUST00000165870 1883 ntTSL 5 BASIC16.72■□□□□ 0.27
BdnfP21237 Itgb1bp1-201ENSMUST00000076260 1874 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
BdnfP21237 Cnot9-201ENSMUST00000087215 3268 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
BdnfP21237 Rpusd3-202ENSMUST00000113092 1269 ntAPPRIS P2 TSL 1 (best) BASIC16.72■□□□□ 0.27
BdnfP21237 Bricd5-201ENSMUST00000054946 997 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
BdnfP21237 Jkamp-201ENSMUST00000057257 1292 ntAPPRIS P3 TSL 1 (best) BASIC16.72■□□□□ 0.27
BdnfP21237 Lyl1-201ENSMUST00000037165 1800 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
BdnfP21237 Sgsm1-204ENSMUST00000112325 2274 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
BdnfP21237 Gm10461-201ENSMUST00000202073 4786 ntBASIC16.72■□□□□ 0.27
BdnfP21237 Rhot2-201ENSMUST00000043897 3189 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
BdnfP21237 Gm26885-201ENSMUST00000181920 1688 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
BdnfP21237 A430078I02Rik-202ENSMUST00000154066 2233 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
BdnfP21237 Rab6a-201ENSMUST00000032946 3214 ntAPPRIS P3 TSL 1 (best) BASIC16.72■□□□□ 0.27
BdnfP21237 Zxdc-203ENSMUST00000113539 4864 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
BdnfP21237 Tmem81-201ENSMUST00000058167 1742 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
BdnfP21237 Tbx20-202ENSMUST00000166018 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
BdnfP21237 Gm26548-201ENSMUST00000181165 2029 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
BdnfP21237 Cfl1-201ENSMUST00000116560 1148 ntTSL 5 BASIC16.71■□□□□ 0.27
BdnfP21237 Gm6211-202ENSMUST00000167849 925 ntBASIC16.71■□□□□ 0.27
BdnfP21237 Tmem234-215ENSMUST00000173758 453 ntTSL 2 BASIC16.71■□□□□ 0.27
BdnfP21237 Dvl2-201ENSMUST00000019362 2968 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
BdnfP21237 Stx6-209ENSMUST00000195302 955 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
BdnfP21237 Stambp-206ENSMUST00000206400 2144 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
BdnfP21237 Rara-202ENSMUST00000107473 3238 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
BdnfP21237 Zufsp-202ENSMUST00000218055 2180 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
BdnfP21237 Gm28756-202ENSMUST00000209405 2461 ntTSL 5 BASIC16.71■□□□□ 0.26
BdnfP21237 Sprtn-201ENSMUST00000034467 4464 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
BdnfP21237 Col15a1-202ENSMUST00000102917 5172 ntAPPRIS P2 TSL 1 (best) BASIC16.7■□□□□ 0.26
BdnfP21237 Sco1-201ENSMUST00000092996 2412 ntAPPRIS P2 TSL 1 (best) BASIC16.7■□□□□ 0.26
BdnfP21237 Antxr2-202ENSMUST00000199088 2739 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
BdnfP21237 Chd5-202ENSMUST00000030775 9486 ntAPPRIS P3 TSL 5 BASIC16.7■□□□□ 0.26
BdnfP21237 Phtf1-201ENSMUST00000055425 3060 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
BdnfP21237 Mlxip-202ENSMUST00000111596 2653 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
BdnfP21237 Pced1a-202ENSMUST00000110277 1689 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
BdnfP21237 Man2a2-201ENSMUST00000098346 6554 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
BdnfP21237 Fdx1l-201ENSMUST00000010348 812 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
BdnfP21237 Tmem203-201ENSMUST00000104998 854 ntAPPRIS P1 BASIC16.7■□□□□ 0.26
BdnfP21237 Cacng6-201ENSMUST00000108647 868 ntTSL 5 BASIC16.7■□□□□ 0.26
BdnfP21237 Mcl1-202ENSMUST00000178686 858 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
BdnfP21237 AC140264.2-202ENSMUST00000218746 817 ntBASIC16.7■□□□□ 0.26
BdnfP21237 Slc7a6os-201ENSMUST00000035925 1246 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
BdnfP21237 Chpt1-202ENSMUST00000073783 852 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
BdnfP21237 Samd4-211ENSMUST00000228404 3039 ntAPPRIS ALT2 BASIC16.7■□□□□ 0.26
BdnfP21237 Sar1a-201ENSMUST00000020285 2613 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
BdnfP21237 P2ry1-203ENSMUST00000193943 2203 ntAPPRIS P1 BASIC16.7■□□□□ 0.26
BdnfP21237 Slc23a4-205ENSMUST00000201355 2003 ntAPPRIS P1 TSL 5 BASIC16.7■□□□□ 0.26
BdnfP21237 AC125311.2-201ENSMUST00000227477 1940 ntBASIC16.7■□□□□ 0.26
BdnfP21237 Wisp2-201ENSMUST00000029188 1719 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
BdnfP21237 Lrch3-203ENSMUST00000135193 2794 ntAPPRIS ALT2 TSL 5 BASIC16.7■□□□□ 0.26
BdnfP21237 Pmpcb-201ENSMUST00000030882 1615 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
BdnfP21237 Tmem163-203ENSMUST00000160616 2657 ntAPPRIS P1 TSL 2 BASIC16.7■□□□□ 0.26
BdnfP21237 Dock9-202ENSMUST00000100299 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
BdnfP21237 B3galnt2-204ENSMUST00000221300 2397 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
BdnfP21237 Hoxb6-201ENSMUST00000000704 1321 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
BdnfP21237 E230001N04Rik-202ENSMUST00000181029 2091 ntBASIC16.69■□□□□ 0.26
BdnfP21237 Ccnd3-215ENSMUST00000183044 2064 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
BdnfP21237 Crem-234ENSMUST00000154470 1996 ntTSL 5 BASIC16.69■□□□□ 0.26
BdnfP21237 Fxyd6-201ENSMUST00000085939 1788 ntAPPRIS P2 TSL 1 (best) BASIC16.69■□□□□ 0.26
BdnfP21237 Foxp4-203ENSMUST00000113263 3156 ntAPPRIS ALT2 TSL 5 BASIC16.69■□□□□ 0.26
BdnfP21237 Fezf1-201ENSMUST00000031709 2409 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
BdnfP21237 Arntl-204ENSMUST00000210238 2976 ntAPPRIS P1 TSL 5 BASIC16.69■□□□□ 0.26
BdnfP21237 Dhx32-203ENSMUST00000106139 2233 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
BdnfP21237 Ptprf-201ENSMUST00000049074 7656 ntAPPRIS P1 TSL 5 BASIC16.69■□□□□ 0.26
BdnfP21237 Klk9-201ENSMUST00000005891 1476 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
BdnfP21237 Iscu-202ENSMUST00000112311 1395 ntTSL 2 BASIC16.69■□□□□ 0.26
BdnfP21237 Ppp2ca-201ENSMUST00000020608 7102 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
BdnfP21237 Sept8-203ENSMUST00000120878 1806 ntAPPRIS ALT2 TSL 5 BASIC16.69■□□□□ 0.26
BdnfP21237 Irgc1-204ENSMUST00000205776 1835 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
BdnfP21237 Cdc123-201ENSMUST00000043864 1827 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
BdnfP21237 Csnk1g3-201ENSMUST00000069597 4394 ntAPPRIS P1 TSL 5 BASIC16.69■□□□□ 0.26
BdnfP21237 Gm7290-201ENSMUST00000104990 617 ntBASIC16.69■□□□□ 0.26
BdnfP21237 Gm12918-201ENSMUST00000120234 636 ntBASIC16.69■□□□□ 0.26
BdnfP21237 Gm15710-201ENSMUST00000121821 636 ntBASIC16.69■□□□□ 0.26
BdnfP21237 Gm5075-201ENSMUST00000196916 622 ntBASIC16.69■□□□□ 0.26
BdnfP21237 Gm44899-202ENSMUST00000209433 511 ntTSL 5 BASIC16.69■□□□□ 0.26
BdnfP21237 Pts-208ENSMUST00000215416 439 ntTSL 2 BASIC16.69■□□□□ 0.26
BdnfP21237 AC133650.2-201ENSMUST00000217036 607 ntTSL 3 BASIC16.69■□□□□ 0.26
BdnfP21237 Rpl13-ps6-201ENSMUST00000079761 636 ntBASIC16.69■□□□□ 0.26
Retrieved 100 of 76,532 protein–RNA pairs in 31.9 ms