Protein–RNA interactions for Protein: P15379

Cd44, CD44 antigen, mousemouse

Predictions only

Length 778 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cd44P15379 Scrib-203ENSMUST00000109946 5545 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
Cd44P15379 Evx1-201ENSMUST00000031787 2877 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Cd44P15379 Mipep-201ENSMUST00000063562 3015 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Cd44P15379 Guca1b-202ENSMUST00000145462 1556 ntTSL 2 BASIC18.37■□□□□ 0.53
Cd44P15379 Car2-201ENSMUST00000029078 1788 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Cd44P15379 Vangl2-203ENSMUST00000111264 2349 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Cd44P15379 Kctd9-205ENSMUST00000152243 2528 ntTSL 2 BASIC18.37■□□□□ 0.53
Cd44P15379 Dtwd2-203ENSMUST00000163590 2857 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Cd44P15379 Foxp4-203ENSMUST00000113263 3156 ntAPPRIS ALT2 TSL 5 BASIC18.36■□□□□ 0.53
Cd44P15379 Abhd5-204ENSMUST00000156520 3157 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Cd44P15379 BC034090-204ENSMUST00000186156 4873 ntAPPRIS P5 TSL 5 BASIC18.36■□□□□ 0.53
Cd44P15379 Rpl27-202ENSMUST00000107249 732 ntAPPRIS P1 TSL 2 BASIC18.36■□□□□ 0.53
Cd44P15379 Clta-201ENSMUST00000107845 1031 ntAPPRIS ALT2 TSL 2 BASIC18.36■□□□□ 0.53
Cd44P15379 Slc6a8-204ENSMUST00000114467 2509 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Cd44P15379 Gm11927-201ENSMUST00000118472 759 ntBASIC18.36■□□□□ 0.53
Cd44P15379 Nsun5-201ENSMUST00000000940 2243 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Cd44P15379 Plppr2-203ENSMUST00000190387 2608 ntAPPRIS P2 TSL 1 (best) BASIC18.36■□□□□ 0.53
Cd44P15379 Pigt-201ENSMUST00000103101 2562 ntAPPRIS P2 TSL 1 (best) BASIC18.36■□□□□ 0.53
Cd44P15379 Mrpl15-205ENSMUST00000146665 1569 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Cd44P15379 9430097D07Rik-201ENSMUST00000100190 1501 ntAPPRIS P1 BASIC18.35■□□□□ 0.53
Cd44P15379 Flg-201ENSMUST00000050758 1488 ntBASIC18.35■□□□□ 0.53
Cd44P15379 Henmt1-202ENSMUST00000098680 1466 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Cd44P15379 Gm16835-201ENSMUST00000140488 2809 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Cd44P15379 Ube2i-207ENSMUST00000172868 2755 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Cd44P15379 Ppt2-204ENSMUST00000168391 1342 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
Cd44P15379 Hbs1l-203ENSMUST00000092674 2625 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Cd44P15379 Zfp446-202ENSMUST00000108535 2594 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Cd44P15379 AC061963.1-203ENSMUST00000213473 453 ntTSL 3 BASIC18.35■□□□□ 0.53
Cd44P15379 4933406B15Rik-201ENSMUST00000220065 1182 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Cd44P15379 Nfe2l3-201ENSMUST00000005103 2544 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Cd44P15379 Fezf1-201ENSMUST00000031709 2409 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Cd44P15379 Stxbp5-209ENSMUST00000141722 4702 ntAPPRIS P2 TSL 5 BASIC18.35■□□□□ 0.53
Cd44P15379 Rsph3a-201ENSMUST00000097423 2189 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Cd44P15379 Shisa2-201ENSMUST00000053949 3119 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Cd44P15379 Mycn-201ENSMUST00000043396 2674 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Cd44P15379 Eif1a-202ENSMUST00000168382 1750 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Cd44P15379 Fcgrt-201ENSMUST00000003512 1770 ntAPPRIS P2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Cd44P15379 Rbpms-203ENSMUST00000053251 2466 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Cd44P15379 Wdr86-201ENSMUST00000068693 2364 ntAPPRIS P1 TSL 2 BASIC18.34■□□□□ 0.53
Cd44P15379 Ccdc184-201ENSMUST00000031914 2329 ntAPPRIS P1 BASIC18.34■□□□□ 0.53
Cd44P15379 Gm26596-201ENSMUST00000180464 2655 ntBASIC18.34■□□□□ 0.53
Cd44P15379 Rbm15b-201ENSMUST00000055843 6511 ntAPPRIS P1 BASIC18.34■□□□□ 0.53
Cd44P15379 Stx6-209ENSMUST00000195302 955 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Cd44P15379 Nrn1l-201ENSMUST00000060167 617 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
Cd44P15379 Slc39a10-201ENSMUST00000027131 5498 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Cd44P15379 Irx4-202ENSMUST00000176684 2384 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
Cd44P15379 Relt-201ENSMUST00000008462 2851 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Cd44P15379 Gm10654-201ENSMUST00000098653 1633 ntBASIC18.34■□□□□ 0.53
Cd44P15379 Il17re-208ENSMUST00000204774 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
Cd44P15379 Adgra2-202ENSMUST00000178514 5129 ntTSL 5 BASIC18.34■□□□□ 0.53
Cd44P15379 Ldb1-205ENSMUST00000137771 2014 ntTSL 5 BASIC18.33■□□□□ 0.53
Cd44P15379 Zfyve19-201ENSMUST00000090174 2008 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Cd44P15379 Rragd-203ENSMUST00000098190 5008 ntAPPRIS P1 TSL 2 BASIC18.33■□□□□ 0.53
Cd44P15379 Hivep3-201ENSMUST00000084306 2973 ntBASIC18.33■□□□□ 0.53
Cd44P15379 Katnbl1-201ENSMUST00000028552 2886 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Cd44P15379 Stk39-201ENSMUST00000102715 3536 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Cd44P15379 Josd2-203ENSMUST00000118493 922 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.52
Cd44P15379 H2-D1-202ENSMUST00000172785 2102 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Cd44P15379 Moap1-202ENSMUST00000178384 1284 ntAPPRIS P1 TSL 2 BASIC18.33■□□□□ 0.52
Cd44P15379 Timp4-202ENSMUST00000205131 945 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
Cd44P15379 Prmt1-205ENSMUST00000207659 945 ntTSL 5 BASIC18.33■□□□□ 0.52
Cd44P15379 Cetn3-201ENSMUST00000022009 1226 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Cd44P15379 Rab3c-203ENSMUST00000224180 967 ntBASIC18.33■□□□□ 0.52
Cd44P15379 Ubxn1-201ENSMUST00000096255 1041 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Cd44P15379 Gm16401-202ENSMUST00000197463 2074 ntBASIC18.33■□□□□ 0.52
Cd44P15379 F830208F22Rik-202ENSMUST00000143732 2891 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
Cd44P15379 Sema6c-214ENSMUST00000202315 2843 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.52
Cd44P15379 Fancg-201ENSMUST00000030165 2771 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Cd44P15379 Cdc42ep3-201ENSMUST00000068958 1967 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Cd44P15379 4430402I18Rik-205ENSMUST00000162110 1559 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.52
Cd44P15379 Csnk1a1-206ENSMUST00000165721 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Cd44P15379 Hand1-201ENSMUST00000036917 1904 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Cd44P15379 Evx2-201ENSMUST00000001867 4191 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.52
Cd44P15379 Asap2-202ENSMUST00000064595 5678 ntAPPRIS P4 TSL 5 BASIC18.33■□□□□ 0.52
Cd44P15379 Hnrnpll-205ENSMUST00000184635 3009 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Cd44P15379 Rhof-201ENSMUST00000031401 2208 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Cd44P15379 Chmp2b-201ENSMUST00000004965 1838 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Cd44P15379 Polr3e-203ENSMUST00000207481 2545 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
Cd44P15379 Ddx39b-201ENSMUST00000068056 1739 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Cd44P15379 Nsfl1c-203ENSMUST00000103160 1369 ntTSL 5 BASIC18.32■□□□□ 0.52
Cd44P15379 Gm20628-201ENSMUST00000177363 3215 ntBASIC18.32■□□□□ 0.52
Cd44P15379 4921536K21Rik-201ENSMUST00000020712 2590 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Cd44P15379 Gm8773-201ENSMUST00000101627 1268 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Cd44P15379 Fam213a-202ENSMUST00000118466 1567 ntAPPRIS ALT1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Cd44P15379 Nmnat3-201ENSMUST00000112935 2166 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Cd44P15379 March8-202ENSMUST00000101032 4611 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Cd44P15379 Prodh-201ENSMUST00000003620 2385 ntAPPRIS P2 TSL 1 (best) BASIC18.32■□□□□ 0.52
Cd44P15379 Haglr-201ENSMUST00000100000 2085 ntBASIC18.32■□□□□ 0.52
Cd44P15379 Gm26580-201ENSMUST00000181002 2095 ntTSL 5 BASIC18.32■□□□□ 0.52
Cd44P15379 Trak1-209ENSMUST00000210798 5363 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
Cd44P15379 Bcs1l-202ENSMUST00000113732 1679 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
Cd44P15379 Pick1-206ENSMUST00000166155 1699 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Cd44P15379 Dusp4-201ENSMUST00000033930 2740 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Cd44P15379 Eps8-201ENSMUST00000058210 4567 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Cd44P15379 Guf1-202ENSMUST00000087228 3433 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Cd44P15379 Arhgef7-205ENSMUST00000110909 4926 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Cd44P15379 Rbm12b1-202ENSMUST00000069128 3069 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Cd44P15379 Tmem234-215ENSMUST00000173758 453 ntTSL 2 BASIC18.31■□□□□ 0.52
Cd44P15379 Jkamp-201ENSMUST00000057257 1292 ntAPPRIS P3 TSL 1 (best) BASIC18.31■□□□□ 0.52
Cd44P15379 Lrriq4-203ENSMUST00000172350 1797 ntAPPRIS P3 TSL 5 BASIC18.31■□□□□ 0.52
Retrieved 100 of 76,532 protein–RNA pairs in 85 ms