Protein–RNA interactions for Protein: P10146

Ccl1, C-C motif chemokine 1, mousemouse

Predictions only

Length 92 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccl1P10146 Asph-204ENSMUST00000084915 2884 ntTSL 5 BASIC13.62□□□□□ -0.23
Ccl1P10146 Flt1-202ENSMUST00000031653 6895 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Ccl1P10146 Dlgap1-209ENSMUST00000140728 2173 ntAPPRIS ALT2 TSL 5 BASIC13.62□□□□□ -0.23
Ccl1P10146 Tm7sf2-201ENSMUST00000025713 1471 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Ccl1P10146 Rhot1-201ENSMUST00000017831 3029 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Ccl1P10146 1190002N15Rik-201ENSMUST00000113028 3950 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Ccl1P10146 March8-201ENSMUST00000079012 4450 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Ccl1P10146 Pcdha3-201ENSMUST00000192503 5332 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Ccl1P10146 Mybl2-201ENSMUST00000018005 3651 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Ccl1P10146 Rara-204ENSMUST00000107475 2469 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Ccl1P10146 Zmynd19-201ENSMUST00000028350 3903 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Ccl1P10146 Lpgat1-201ENSMUST00000110855 7233 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Ccl1P10146 Rps2-208ENSMUST00000170715 998 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Ccl1P10146 Igfbp6-201ENSMUST00000023807 1112 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Ccl1P10146 Rps2-201ENSMUST00000054289 1094 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Ccl1P10146 Adnp-201ENSMUST00000057793 4917 ntAPPRIS P1 TSL 5 BASIC13.62□□□□□ -0.23
Ccl1P10146 Elac2-202ENSMUST00000101049 2884 ntAPPRIS ALT2 TSL 5 BASIC13.62□□□□□ -0.23
Ccl1P10146 Golga7-201ENSMUST00000051094 1792 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Ccl1P10146 Nfe2l3-201ENSMUST00000005103 2544 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Ccl1P10146 Crtap-201ENSMUST00000084881 1674 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Ccl1P10146 Mycn-201ENSMUST00000043396 2674 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Ccl1P10146 Rnpc3-203ENSMUST00000106536 1839 ntAPPRIS P3 TSL 1 (best) BASIC13.62□□□□□ -0.23
Ccl1P10146 Tpd52l1-201ENSMUST00000000305 1308 ntAPPRIS P2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Ccl1P10146 Grid2-201ENSMUST00000095852 5860 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Ccl1P10146 Ror1-201ENSMUST00000039630 5762 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Ccl1P10146 Fus-203ENSMUST00000106251 5536 ntAPPRIS P3 TSL 1 (best) BASIC13.62□□□□□ -0.23
Ccl1P10146 Kdr-201ENSMUST00000113516 5924 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Ccl1P10146 Rassf1-201ENSMUST00000010211 1727 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Ccl1P10146 Mycl-201ENSMUST00000030407 3501 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Ccl1P10146 Ogfod2-202ENSMUST00000119269 1474 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Ccl1P10146 Sfmbt1-201ENSMUST00000054230 7837 ntAPPRIS P1 TSL 5 BASIC13.61□□□□□ -0.23
Ccl1P10146 Tmed4-201ENSMUST00000004508 2003 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Ccl1P10146 Wdr1-201ENSMUST00000005234 3089 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Ccl1P10146 Clcn2-202ENSMUST00000120099 2812 ntAPPRIS ALT2 TSL 5 BASIC13.61□□□□□ -0.23
Ccl1P10146 Tmem233-201ENSMUST00000111997 2477 ntAPPRIS P1 TSL 2 BASIC13.61□□□□□ -0.23
Ccl1P10146 Cdh4-203ENSMUST00000108911 1208 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Ccl1P10146 Cdk19os-202ENSMUST00000143103 1124 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Ccl1P10146 Gm15202-201ENSMUST00000154188 393 ntTSL 3 BASIC13.61□□□□□ -0.23
Ccl1P10146 Prr3-204ENSMUST00000172900 439 ntTSL 2 BASIC13.61□□□□□ -0.23
Ccl1P10146 Fam168b-208ENSMUST00000191307 844 ntTSL 2 BASIC13.61□□□□□ -0.23
Ccl1P10146 Ctf1-204ENSMUST00000206506 784 ntTSL 2 BASIC13.61□□□□□ -0.23
Ccl1P10146 Josd2-218ENSMUST00000206887 693 ntTSL 5 BASIC13.61□□□□□ -0.23
Ccl1P10146 AC161180.2-201ENSMUST00000222567 1015 ntAPPRIS P1 BASIC13.61□□□□□ -0.23
Ccl1P10146 Lats1-202ENSMUST00000165952 7209 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Ccl1P10146 Vgll3-201ENSMUST00000168064 7009 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Ccl1P10146 Zmym3-201ENSMUST00000063577 6057 ntAPPRIS P2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Ccl1P10146 Ephb4-201ENSMUST00000061244 4340 ntAPPRIS P3 TSL 1 (best) BASIC13.61□□□□□ -0.23
Ccl1P10146 Pdcl3-201ENSMUST00000027247 3914 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Ccl1P10146 Tfdp2-209ENSMUST00000188750 1713 ntAPPRIS ALT2 TSL 5 BASIC13.61□□□□□ -0.23
Ccl1P10146 Nsmf-203ENSMUST00000100334 2957 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Ccl1P10146 Idnk-204ENSMUST00000226010 1898 ntBASIC13.61□□□□□ -0.23
Ccl1P10146 Kat14-208ENSMUST00000147747 3299 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Ccl1P10146 Antxr2-202ENSMUST00000199088 2739 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Ccl1P10146 Clasrp-201ENSMUST00000086041 2180 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Ccl1P10146 Tmem170-201ENSMUST00000034431 3878 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Ccl1P10146 Tmem5-205ENSMUST00000140299 4793 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Ccl1P10146 Zxdc-202ENSMUST00000075117 4126 ntAPPRIS P3 TSL 1 (best) BASIC13.6□□□□□ -0.23
Ccl1P10146 Ret-202ENSMUST00000088790 4497 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Ccl1P10146 Nkx6-2-202ENSMUST00000106095 1299 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Ccl1P10146 Emc6-202ENSMUST00000108480 563 ntAPPRIS P1 TSL 2 BASIC13.6□□□□□ -0.23
Ccl1P10146 Paip2-204ENSMUST00000115736 857 ntAPPRIS P1 TSL 3 BASIC13.6□□□□□ -0.23
Ccl1P10146 Flvcr1-202ENSMUST00000191946 1216 ntBASIC13.6□□□□□ -0.23
Ccl1P10146 Gm11175-202ENSMUST00000211380 408 ntTSL 3 BASIC13.6□□□□□ -0.23
Ccl1P10146 Gm20163-202ENSMUST00000212288 989 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Ccl1P10146 E230001N04Rik-202ENSMUST00000181029 2091 ntBASIC13.6□□□□□ -0.23
Ccl1P10146 Tnxb-202ENSMUST00000168533 9381 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Ccl1P10146 Ttll5-201ENSMUST00000040179 5081 ntAPPRIS P3 TSL 1 (best) BASIC13.6□□□□□ -0.23
Ccl1P10146 Apba3-201ENSMUST00000057798 2106 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Ccl1P10146 Gpr137b-201ENSMUST00000021738 2971 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Ccl1P10146 Gpd2-202ENSMUST00000112618 5759 ntTSL 5 BASIC13.59□□□□□ -0.23
Ccl1P10146 Dnajb2-206ENSMUST00000187058 1732 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Ccl1P10146 Gm38345-201ENSMUST00000192635 1748 ntBASIC13.59□□□□□ -0.23
Ccl1P10146 Capn15-205ENSMUST00000212520 5216 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Ccl1P10146 Sox14-201ENSMUST00000054819 2065 ntAPPRIS P1 BASIC13.59□□□□□ -0.23
Ccl1P10146 St8sia6-201ENSMUST00000003509 7618 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Ccl1P10146 Dleu2-208ENSMUST00000182768 1442 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Ccl1P10146 Kctd1-202ENSMUST00000168989 3456 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Ccl1P10146 Srsf1-202ENSMUST00000107920 1209 ntTSL 5 BASIC13.59□□□□□ -0.23
Ccl1P10146 D630002J18Rik-201ENSMUST00000181854 1115 ntBASIC13.59□□□□□ -0.23
Ccl1P10146 Gm43137-201ENSMUST00000198052 594 ntBASIC13.59□□□□□ -0.23
Ccl1P10146 Gsc-201ENSMUST00000021513 1268 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Ccl1P10146 Acbd4-203ENSMUST00000107040 1959 ntTSL 2 BASIC13.59□□□□□ -0.23
Ccl1P10146 Gna12-201ENSMUST00000000153 3416 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Ccl1P10146 Gm26803-201ENSMUST00000181705 2011 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Ccl1P10146 Ankrd50-202ENSMUST00000120875 4945 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Ccl1P10146 Megf11-210ENSMUST00000164113 6018 ntTSL 5 BASIC13.59□□□□□ -0.23
Ccl1P10146 Gm20628-201ENSMUST00000177363 3215 ntBASIC13.58□□□□□ -0.23
Ccl1P10146 AC165249.1-201ENSMUST00000220031 1599 ntTSL 1 (best) BASIC13.58□□□□□ -0.23
Ccl1P10146 9330151L19Rik-201ENSMUST00000181850 2545 ntTSL 1 (best) BASIC13.58□□□□□ -0.23
Ccl1P10146 Scube3-201ENSMUST00000043503 6699 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Ccl1P10146 A930003O13Rik-203ENSMUST00000199056 1955 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Ccl1P10146 Mcm9-201ENSMUST00000075540 4882 ntAPPRIS P1 TSL 2 BASIC13.58□□□□□ -0.24
Ccl1P10146 Pcbp1-201ENSMUST00000053015 1830 ntAPPRIS P1 BASIC13.58□□□□□ -0.24
Ccl1P10146 Meox1-201ENSMUST00000057054 2228 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Ccl1P10146 Slc47a1-201ENSMUST00000010267 2639 ntAPPRIS P1 TSL 2 BASIC13.58□□□□□ -0.24
Ccl1P10146 Robo3-202ENSMUST00000115038 4797 ntAPPRIS P2 TSL 5 BASIC13.58□□□□□ -0.24
Ccl1P10146 Nyx-201ENSMUST00000050434 5183 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Ccl1P10146 Bex1-202ENSMUST00000113118 754 ntAPPRIS P1 TSL 2 BASIC13.58□□□□□ -0.24
Ccl1P10146 5031425F14Rik-201ENSMUST00000127920 2098 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Ccl1P10146 Tmem163-203ENSMUST00000160616 2657 ntAPPRIS P1 TSL 2 BASIC13.58□□□□□ -0.24
Retrieved 100 of 76,532 protein–RNA pairs in 62 ms