Protein–RNA interactions for Protein: P0DPB4

Schip1, Schwannomin-interacting protein 1, mousemouse

Predictions only

Length 484 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Schip1P0DPB4 Polr3d-201ENSMUST00000000793 2016 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Schip1P0DPB4 Cdv3-202ENSMUST00000072249 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
Schip1P0DPB4 Col27a1-201ENSMUST00000036300 7612 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Schip1P0DPB4 Mtss1l-201ENSMUST00000052457 4717 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Schip1P0DPB4 Trmo-202ENSMUST00000086563 1554 ntAPPRIS P3 TSL 1 (best) BASIC18.21■□□□□ 0.51
Schip1P0DPB4 Ptp4a2-201ENSMUST00000030578 3646 ntAPPRIS P1 TSL 5 BASIC18.21■□□□□ 0.5
Schip1P0DPB4 Slc7a10-201ENSMUST00000001854 1953 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.5
Schip1P0DPB4 Cyth2-201ENSMUST00000056820 2527 ntAPPRIS ALT1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Schip1P0DPB4 Retreg1-201ENSMUST00000022881 3248 ntTSL 5 BASIC18.2■□□□□ 0.5
Schip1P0DPB4 Htr6-202ENSMUST00000105802 2341 ntAPPRIS P1 TSL 5 BASIC18.2■□□□□ 0.5
Schip1P0DPB4 Fev-202ENSMUST00000159232 928 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Schip1P0DPB4 Gm44878-201ENSMUST00000205812 1295 ntBASIC18.2■□□□□ 0.5
Schip1P0DPB4 Akt2-205ENSMUST00000108344 4544 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Schip1P0DPB4 A430057M04Rik-202ENSMUST00000170150 2176 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Schip1P0DPB4 Ecel1-204ENSMUST00000161002 3033 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Schip1P0DPB4 Stard3-201ENSMUST00000018311 2070 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Schip1P0DPB4 U2af2-209ENSMUST00000209099 2088 ntAPPRIS P3 TSL 1 (best) BASIC18.19■□□□□ 0.5
Schip1P0DPB4 Auh-202ENSMUST00000110031 3235 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Schip1P0DPB4 Sncb-201ENSMUST00000036825 1351 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Schip1P0DPB4 Lcorl-202ENSMUST00000045586 5708 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Schip1P0DPB4 Pced1a-202ENSMUST00000110277 1689 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Schip1P0DPB4 Meg3-201ENSMUST00000124106 1988 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Schip1P0DPB4 Arl6ip4-202ENSMUST00000122394 982 ntAPPRIS ALT2 TSL 5 BASIC18.19■□□□□ 0.5
Schip1P0DPB4 H2-K2-201ENSMUST00000174250 1049 ntBASIC18.19■□□□□ 0.5
Schip1P0DPB4 Aqp2-201ENSMUST00000023752 1416 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Schip1P0DPB4 Dpf1-202ENSMUST00000065181 1574 ntAPPRIS ALT1 TSL 5 BASIC18.19■□□□□ 0.5
Schip1P0DPB4 H2-Eb1-201ENSMUST00000074557 1184 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Schip1P0DPB4 Aatk-203ENSMUST00000103020 5687 ntAPPRIS P3 TSL 1 (best) BASIC18.19■□□□□ 0.5
Schip1P0DPB4 Pkp4-202ENSMUST00000102754 4614 ntAPPRIS P3 TSL 1 (best) BASIC18.19■□□□□ 0.5
Schip1P0DPB4 Wnt4-201ENSMUST00000045747 4194 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Schip1P0DPB4 Gm37820-201ENSMUST00000194021 2147 ntBASIC18.19■□□□□ 0.5
Schip1P0DPB4 Shank3-203ENSMUST00000109309 7365 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
Schip1P0DPB4 Gm26885-201ENSMUST00000181920 1688 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Schip1P0DPB4 Fam171a2-201ENSMUST00000049057 3118 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Schip1P0DPB4 Diras1-201ENSMUST00000055125 2953 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Schip1P0DPB4 Spire1-203ENSMUST00000115050 5405 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
Schip1P0DPB4 S1pr5-201ENSMUST00000122088 2500 ntAPPRIS P1 TSL 2 BASIC18.18■□□□□ 0.5
Schip1P0DPB4 Artn-202ENSMUST00000097913 1568 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Schip1P0DPB4 Nsg1-201ENSMUST00000031009 2581 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Schip1P0DPB4 Zfp629-207ENSMUST00000134446 670 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Schip1P0DPB4 Nudt17-204ENSMUST00000200387 2108 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Schip1P0DPB4 Rpl18-202ENSMUST00000209287 1027 ntTSL 3 BASIC18.18■□□□□ 0.5
Schip1P0DPB4 Cck-204ENSMUST00000216138 799 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Schip1P0DPB4 Gm10638-201ENSMUST00000098532 905 ntAPPRIS P1 BASIC18.18■□□□□ 0.5
Schip1P0DPB4 Gm43702-201ENSMUST00000198772 2546 ntBASIC18.18■□□□□ 0.5
Schip1P0DPB4 Lbp-202ENSMUST00000109491 1322 ntTSL 2 BASIC18.18■□□□□ 0.5
Schip1P0DPB4 K230015D01Rik-201ENSMUST00000211969 1516 ntBASIC18.18■□□□□ 0.5
Schip1P0DPB4 Zdhhc6-201ENSMUST00000076891 2263 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Schip1P0DPB4 Dhrs7-201ENSMUST00000021512 1385 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Schip1P0DPB4 Apbb1-219ENSMUST00000191601 2690 ntAPPRIS P4 TSL 5 BASIC18.17■□□□□ 0.5
Schip1P0DPB4 Bcat2-201ENSMUST00000033098 1772 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Schip1P0DPB4 Ttpal-202ENSMUST00000109408 1999 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Schip1P0DPB4 Rps6ka1-202ENSMUST00000105894 3135 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Schip1P0DPB4 Fam131b-201ENSMUST00000031891 4065 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Schip1P0DPB4 Camsap3-212ENSMUST00000208240 2572 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Schip1P0DPB4 Snx15-201ENSMUST00000025702 1635 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Schip1P0DPB4 Sart1-201ENSMUST00000044207 5091 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Schip1P0DPB4 Gpaa1-210ENSMUST00000172281 1809 ntTSL 5 BASIC18.17■□□□□ 0.5
Schip1P0DPB4 Fam104a-201ENSMUST00000120194 2619 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Schip1P0DPB4 Gm5643-201ENSMUST00000117081 966 ntBASIC18.17■□□□□ 0.5
Schip1P0DPB4 Zfp428-203ENSMUST00000177205 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
Schip1P0DPB4 Gm3331-201ENSMUST00000183423 1017 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Schip1P0DPB4 Mir8112-201ENSMUST00000184382 131 ntBASIC18.17■□□□□ 0.5
Schip1P0DPB4 1700101I19Rik-202ENSMUST00000186712 510 ntBASIC18.17■□□□□ 0.5
Schip1P0DPB4 Smim10l1-204ENSMUST00000191462 574 ntTSL 3 BASIC18.17■□□□□ 0.5
Schip1P0DPB4 1600023N17Rik-201ENSMUST00000196242 1007 ntBASIC18.17■□□□□ 0.5
Schip1P0DPB4 Gm18025-201ENSMUST00000221733 862 ntBASIC18.17■□□□□ 0.5
Schip1P0DPB4 4930505A04Rik-201ENSMUST00000041763 904 ntAPPRIS P1 TSL 2 BASIC18.17■□□□□ 0.5
Schip1P0DPB4 4930426D05Rik-202ENSMUST00000139804 1650 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Schip1P0DPB4 Gm27029-202ENSMUST00000107259 1855 ntAPPRIS P5 TSL 5 BASIC18.17■□□□□ 0.5
Schip1P0DPB4 Larp1b-206ENSMUST00000191872 1505 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
Schip1P0DPB4 Gm16712-201ENSMUST00000181962 1960 ntTSL 2 BASIC18.17■□□□□ 0.5
Schip1P0DPB4 Whrn-206ENSMUST00000102867 4013 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
Schip1P0DPB4 Nrn1-203ENSMUST00000223611 1443 ntBASIC18.16■□□□□ 0.5
Schip1P0DPB4 Fam109a-201ENSMUST00000056654 2368 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Schip1P0DPB4 Tspan4-201ENSMUST00000026585 1466 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Schip1P0DPB4 Elac2-203ENSMUST00000108697 2612 ntAPPRIS ALT2 TSL 5 BASIC18.16■□□□□ 0.5
Schip1P0DPB4 Tmem198-202ENSMUST00000113575 2185 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Schip1P0DPB4 Hist1h4c-201ENSMUST00000102967 820 ntAPPRIS P1 BASIC18.16■□□□□ 0.5
Schip1P0DPB4 Tpm1-204ENSMUST00000113684 887 ntTSL 5 BASIC18.16■□□□□ 0.5
Schip1P0DPB4 Gm13401-201ENSMUST00000117074 291 ntBASIC18.16■□□□□ 0.5
Schip1P0DPB4 Gtf2a2-204ENSMUST00000119905 622 ntTSL 2 BASIC18.16■□□□□ 0.5
Schip1P0DPB4 Gssos2-201ENSMUST00000130859 727 ntTSL 3 BASIC18.16■□□□□ 0.5
Schip1P0DPB4 Snx12-204ENSMUST00000156473 1114 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Schip1P0DPB4 Gm20760-201ENSMUST00000179197 648 ntBASIC18.16■□□□□ 0.5
Schip1P0DPB4 Kcnn4-203ENSMUST00000205626 461 ntTSL 5 BASIC18.16■□□□□ 0.5
Schip1P0DPB4 AC166341.7-201ENSMUST00000221698 126 ntBASIC18.16■□□□□ 0.5
Schip1P0DPB4 Synm-205ENSMUST00000208815 2697 ntAPPRIS ALT2 TSL 5 BASIC18.16■□□□□ 0.5
Schip1P0DPB4 Odf2-211ENSMUST00000113767 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
Schip1P0DPB4 Agpat3-203ENSMUST00000105388 3681 ntAPPRIS P1 TSL 5 BASIC18.16■□□□□ 0.5
Schip1P0DPB4 Fcho2-208ENSMUST00000224992 2964 ntBASIC18.16■□□□□ 0.5
Schip1P0DPB4 Guca1b-202ENSMUST00000145462 1556 ntTSL 2 BASIC18.16■□□□□ 0.5
Schip1P0DPB4 Nrxn2-202ENSMUST00000113458 3503 ntTSL 5 BASIC18.16■□□□□ 0.5
Schip1P0DPB4 Klf14-201ENSMUST00000101589 3056 ntAPPRIS P1 BASIC18.16■□□□□ 0.5
Schip1P0DPB4 Eif2b5-201ENSMUST00000003320 3186 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Schip1P0DPB4 Pitx2-207ENSMUST00000174661 1942 ntAPPRIS P3 TSL 1 (best) BASIC18.15■□□□□ 0.5
Schip1P0DPB4 Slc35e3-201ENSMUST00000079041 3489 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Schip1P0DPB4 Ythdc1-203ENSMUST00000120498 3269 ntAPPRIS ALT2 TSL 5 BASIC18.15■□□□□ 0.5
Schip1P0DPB4 Itsn1-201ENSMUST00000056482 5364 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Schip1P0DPB4 Zbtb24-201ENSMUST00000080771 2844 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Retrieved 100 of 76,532 protein–RNA pairs in 25.2 ms