Protein–RNA interactions for Protein: P09632

Hoxb8, Homeobox protein Hox-B8, mousemouse

Predictions only

Length 243 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxb8P09632 Zscan12-201ENSMUST00000053293 2270 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Hoxb8P09632 BC034090-204ENSMUST00000186156 4873 ntAPPRIS P5 TSL 5 BASIC18.65■□□□□ 0.58
Hoxb8P09632 Sobp-201ENSMUST00000040275 4980 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
Hoxb8P09632 Fxyd6-203ENSMUST00000217381 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Hoxb8P09632 Tmem60-201ENSMUST00000115259 1147 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Hoxb8P09632 Snx15-207ENSMUST00000154601 767 ntTSL 5 BASIC18.64■□□□□ 0.57
Hoxb8P09632 Gm6345-202ENSMUST00000180900 204 ntBASIC18.64■□□□□ 0.57
Hoxb8P09632 Gm33142-201ENSMUST00000193913 867 ntBASIC18.64■□□□□ 0.57
Hoxb8P09632 Gm4316-202ENSMUST00000212490 1115 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Hoxb8P09632 Nme4-201ENSMUST00000025007 912 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Hoxb8P09632 Ntpcr-201ENSMUST00000034313 1155 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Hoxb8P09632 Fam167b-201ENSMUST00000052835 913 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Hoxb8P09632 Ppp1r13b-201ENSMUST00000054815 4389 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Hoxb8P09632 Dexi-203ENSMUST00000184863 2537 ntAPPRIS P1 TSL 2 BASIC18.64■□□□□ 0.57
Hoxb8P09632 Acp5-204ENSMUST00000213815 1419 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.57
Hoxb8P09632 Acp5-206ENSMUST00000217643 1447 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.57
Hoxb8P09632 Gm45623-201ENSMUST00000210744 1457 ntAPPRIS P1 BASIC18.64■□□□□ 0.57
Hoxb8P09632 Slc30a9-201ENSMUST00000113676 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
Hoxb8P09632 Sdcbp-201ENSMUST00000029912 2745 ntAPPRIS ALT1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Hoxb8P09632 Klhl2-201ENSMUST00000034017 3412 ntAPPRIS P2 TSL 1 (best) BASIC18.64■□□□□ 0.57
Hoxb8P09632 Krt19-201ENSMUST00000007317 1576 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Hoxb8P09632 Ddx41-201ENSMUST00000021956 2205 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Hoxb8P09632 2810474O19Rik-201ENSMUST00000046689 6066 ntAPPRIS P2 TSL 1 (best) BASIC18.63■□□□□ 0.57
Hoxb8P09632 Obsl1-202ENSMUST00000113567 5679 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Hoxb8P09632 Elmo2-204ENSMUST00000103088 3052 ntAPPRIS ALT2 TSL 5 BASIC18.63■□□□□ 0.57
Hoxb8P09632 Zfp800-203ENSMUST00000115321 2699 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Hoxb8P09632 Nectin2-202ENSMUST00000108450 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
Hoxb8P09632 Smim15-205ENSMUST00000225972 2097 ntAPPRIS P1 BASIC18.63■□□□□ 0.57
Hoxb8P09632 AC153845.2-202ENSMUST00000213372 807 ntTSL 3 BASIC18.63■□□□□ 0.57
Hoxb8P09632 Mgst3-201ENSMUST00000028005 1097 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Hoxb8P09632 Lysmd2-201ENSMUST00000034702 1189 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Hoxb8P09632 Lce1i-201ENSMUST00000090866 731 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Hoxb8P09632 Wnk2-205ENSMUST00000110097 6882 ntAPPRIS ALT2 TSL 5 BASIC18.63■□□□□ 0.57
Hoxb8P09632 Wnk2-203ENSMUST00000091623 6897 ntAPPRIS P4 TSL 5 BASIC18.63■□□□□ 0.57
Hoxb8P09632 Mxi1-201ENSMUST00000003870 5156 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Hoxb8P09632 Lyl1-201ENSMUST00000037165 1800 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Hoxb8P09632 Chd5-202ENSMUST00000030775 9486 ntAPPRIS P3 TSL 5 BASIC18.63■□□□□ 0.57
Hoxb8P09632 Dgke-202ENSMUST00000107894 8347 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
Hoxb8P09632 Cdh4-201ENSMUST00000000314 6388 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Hoxb8P09632 Med14-201ENSMUST00000076016 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
Hoxb8P09632 Hdgfl3-201ENSMUST00000026094 2865 ntAPPRIS ALT1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Hoxb8P09632 Trpc4ap-202ENSMUST00000103140 3091 ntAPPRIS P3 TSL 1 (best) BASIC18.62■□□□□ 0.57
Hoxb8P09632 Lats2-201ENSMUST00000022531 5191 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Hoxb8P09632 Gm10418-201ENSMUST00000100943 576 ntBASIC18.62■□□□□ 0.57
Hoxb8P09632 Tsfm-202ENSMUST00000120547 1271 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Hoxb8P09632 4833413E03Rik-201ENSMUST00000013706 1091 ntTSL 5 BASIC18.62■□□□□ 0.57
Hoxb8P09632 Arpc4-204ENSMUST00000204802 794 ntTSL 3 BASIC18.62■□□□□ 0.57
Hoxb8P09632 Dscc1-201ENSMUST00000023059 1324 ntAPPRIS P2 TSL 1 (best) BASIC18.62■□□□□ 0.57
Hoxb8P09632 C030014I23Rik-201ENSMUST00000080911 1810 ntBASIC18.62■□□□□ 0.57
Hoxb8P09632 Lgmn-201ENSMUST00000021607 1990 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Hoxb8P09632 Gm21949-201ENSMUST00000182006 2369 ntAPPRIS P1 TSL 2 BASIC18.62■□□□□ 0.57
Hoxb8P09632 Lca5l-201ENSMUST00000054855 2508 ntAPPRIS P2 TSL 1 (best) BASIC18.62■□□□□ 0.57
Hoxb8P09632 Icam5-201ENSMUST00000019616 2947 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Hoxb8P09632 Smap2-201ENSMUST00000043200 2905 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Hoxb8P09632 Sdc3-201ENSMUST00000070478 4973 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Hoxb8P09632 Tmem127-201ENSMUST00000035871 4811 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Hoxb8P09632 Gm44832-201ENSMUST00000208849 2303 ntBASIC18.61■□□□□ 0.57
Hoxb8P09632 Fgf22-202ENSMUST00000219228 2167 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Hoxb8P09632 Pick1-201ENSMUST00000018295 1977 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Hoxb8P09632 Dip2c-203ENSMUST00000174552 8023 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Hoxb8P09632 Polr2m-202ENSMUST00000163972 2138 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Hoxb8P09632 Lysmd4-209ENSMUST00000208998 2110 ntAPPRIS P2 TSL 1 (best) BASIC18.61■□□□□ 0.57
Hoxb8P09632 Sart1-201ENSMUST00000044207 5091 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Hoxb8P09632 Pacsin1-203ENSMUST00000114872 1647 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Hoxb8P09632 Hmg20b-201ENSMUST00000020454 1621 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Hoxb8P09632 Rfx7-201ENSMUST00000093820 7988 ntAPPRIS P1 TSL 5 BASIC18.6■□□□□ 0.57
Hoxb8P09632 Lmbr1-207ENSMUST00000200564 1598 ntTSL 5 BASIC18.6■□□□□ 0.57
Hoxb8P09632 Prdm6-203ENSMUST00000115399 2227 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
Hoxb8P09632 Fbxo9-203ENSMUST00000159099 1201 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Hoxb8P09632 Snrnp48-202ENSMUST00000178564 847 ntTSL 5 BASIC18.6■□□□□ 0.57
Hoxb8P09632 Gm42738-201ENSMUST00000201813 439 ntTSL 3 BASIC18.6■□□□□ 0.57
Hoxb8P09632 Stx3-208ENSMUST00000211641 1018 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Hoxb8P09632 Cdk2ap2-201ENSMUST00000025779 1080 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Hoxb8P09632 Nkx2-9-201ENSMUST00000072631 1264 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Hoxb8P09632 Lzic-201ENSMUST00000030842 1817 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Hoxb8P09632 Map4k4-201ENSMUST00000163854 5782 ntAPPRIS ALT2 TSL 5 BASIC18.6■□□□□ 0.57
Hoxb8P09632 Adam22-205ENSMUST00000115385 2318 ntTSL 2 BASIC18.6■□□□□ 0.57
Hoxb8P09632 Gm10654-201ENSMUST00000098653 1633 ntBASIC18.6■□□□□ 0.57
Hoxb8P09632 Gpr84-201ENSMUST00000079824 1550 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Hoxb8P09632 Socs6-203ENSMUST00000125362 2814 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Hoxb8P09632 Spint2-202ENSMUST00000108236 1211 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Hoxb8P09632 Dbndd2-204ENSMUST00000109350 1055 ntAPPRIS P1 TSL 2 BASIC18.59■□□□□ 0.57
Hoxb8P09632 H2-Q6-201ENSMUST00000113879 981 ntAPPRIS P1 TSL 2 BASIC18.59■□□□□ 0.57
Hoxb8P09632 Mir5130-201ENSMUST00000175160 84 ntBASIC18.59■□□□□ 0.57
Hoxb8P09632 Gm2274-201ENSMUST00000184539 609 ntBASIC18.59■□□□□ 0.57
Hoxb8P09632 Fgf9-202ENSMUST00000074654 1198 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Hoxb8P09632 Vat1-201ENSMUST00000040430 2766 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Hoxb8P09632 Hnrnpul2-201ENSMUST00000096753 5726 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Hoxb8P09632 Ccdc6-203ENSMUST00000147545 5511 ntAPPRIS P1 TSL 5 BASIC18.59■□□□□ 0.57
Hoxb8P09632 BC017158-201ENSMUST00000033044 2627 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Hoxb8P09632 Trim44-201ENSMUST00000102573 5612 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Hoxb8P09632 Gm45844-202ENSMUST00000209325 2450 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
Hoxb8P09632 Irgq-201ENSMUST00000049020 6083 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Hoxb8P09632 Paqr7-201ENSMUST00000081525 2351 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Hoxb8P09632 Cops8-201ENSMUST00000036153 2287 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Hoxb8P09632 Phf14-202ENSMUST00000115510 3353 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
Hoxb8P09632 Adgrv1-207ENSMUST00000128585 2580 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
Hoxb8P09632 Zpbp2-202ENSMUST00000081033 1300 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
Hoxb8P09632 Tmod1-201ENSMUST00000107773 3158 ntAPPRIS P1 TSL 5 BASIC18.58■□□□□ 0.57
Hoxb8P09632 Utf1-201ENSMUST00000168457 1227 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Retrieved 100 of 76,532 protein–RNA pairs in 58.5 ms