Protein–RNA interactions for Protein: P09631

Hoxa9, Homeobox protein Hox-A9, mousemouse

Predictions only

Length 271 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxa9P09631 Klhl25-201ENSMUST00000092073 3385 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Hoxa9P09631 Nlrp5-ps-201ENSMUST00000044683 1913 ntTSL 2 BASIC17.57■□□□□ 0.4
Hoxa9P09631 Slc9a5-201ENSMUST00000073149 3499 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Hoxa9P09631 Kdm1a-202ENSMUST00000105847 3028 ntAPPRIS ALT2 TSL 5 BASIC17.56■□□□□ 0.4
Hoxa9P09631 Rnaseh2a-202ENSMUST00000109736 2981 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
Hoxa9P09631 Tekt5-202ENSMUST00000115831 1277 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
Hoxa9P09631 Gm7638-201ENSMUST00000121348 967 ntBASIC17.56■□□□□ 0.4
Hoxa9P09631 Cldn18-203ENSMUST00000131922 860 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Hoxa9P09631 Zfp629-206ENSMUST00000132524 215 ntTSL 5 BASIC17.56■□□□□ 0.4
Hoxa9P09631 Gm10459-201ENSMUST00000202708 1155 ntBASIC17.56■□□□□ 0.4
Hoxa9P09631 Gm29791-202ENSMUST00000207888 369 ntBASIC17.56■□□□□ 0.4
Hoxa9P09631 Efcab11-207ENSMUST00000223114 1122 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
Hoxa9P09631 AC130711.1-201ENSMUST00000224277 906 ntAPPRIS P1 BASIC17.56■□□□□ 0.4
Hoxa9P09631 Gng11-201ENSMUST00000031670 919 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Hoxa9P09631 Lsm10-201ENSMUST00000055575 943 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Hoxa9P09631 Gm8994-201ENSMUST00000077886 1236 ntAPPRIS P1 BASIC17.56■□□□□ 0.4
Hoxa9P09631 Dap3-201ENSMUST00000090938 4760 ntAPPRIS P2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Hoxa9P09631 2810408A11Rik-201ENSMUST00000018714 1485 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Hoxa9P09631 Zfp697-201ENSMUST00000056096 5166 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Hoxa9P09631 Dtx4-201ENSMUST00000045521 5765 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Hoxa9P09631 Rtkn-203ENSMUST00000121093 2597 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
Hoxa9P09631 Nphp3-201ENSMUST00000035167 5899 ntAPPRIS P2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Hoxa9P09631 Igfbp2-201ENSMUST00000047328 1307 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Hoxa9P09631 Zpbp2-202ENSMUST00000081033 1300 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Hoxa9P09631 Gm26884-201ENSMUST00000181207 3074 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Hoxa9P09631 Ldlrad4-201ENSMUST00000063775 2493 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Hoxa9P09631 9330111N05Rik-202ENSMUST00000181043 2449 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Hoxa9P09631 Snx3-202ENSMUST00000105499 1057 ntTSL 5 BASIC17.55■□□□□ 0.4
Hoxa9P09631 Gm13401-201ENSMUST00000117074 291 ntBASIC17.55■□□□□ 0.4
Hoxa9P09631 Pdcd5-202ENSMUST00000120714 767 ntTSL 3 BASIC17.55■□□□□ 0.4
Hoxa9P09631 Gm5577-203ENSMUST00000153372 815 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Hoxa9P09631 Steap1-201ENSMUST00000015796 1230 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Hoxa9P09631 Gm28793-201ENSMUST00000190845 413 ntTSL 5 BASIC17.55■□□□□ 0.4
Hoxa9P09631 Gm33142-201ENSMUST00000193913 867 ntBASIC17.55■□□□□ 0.4
Hoxa9P09631 Inmt-201ENSMUST00000003569 1077 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Hoxa9P09631 Zfp524-201ENSMUST00000086349 1142 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Hoxa9P09631 Tbpl1-201ENSMUST00000095794 1195 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Hoxa9P09631 Fez2-202ENSMUST00000112487 2020 ntAPPRIS ALT1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Hoxa9P09631 Zfp219-204ENSMUST00000226522 2804 ntAPPRIS P2 BASIC17.55■□□□□ 0.4
Hoxa9P09631 Dexi-203ENSMUST00000184863 2537 ntAPPRIS P1 TSL 2 BASIC17.55■□□□□ 0.4
Hoxa9P09631 Rasgrp2-224ENSMUST00000167240 2192 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
Hoxa9P09631 Epn1-207ENSMUST00000208634 2127 ntAPPRIS ALT2 TSL 5 BASIC17.54■□□□□ 0.4
Hoxa9P09631 Rsph6a-201ENSMUST00000035521 2354 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Hoxa9P09631 Ccdc149-201ENSMUST00000059428 3295 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
Hoxa9P09631 Praf2-201ENSMUST00000033489 1339 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Hoxa9P09631 Dus1l-202ENSMUST00000106133 1762 ntAPPRIS ALT2 TSL 5 BASIC17.54■□□□□ 0.4
Hoxa9P09631 AA467197-202ENSMUST00000110512 751 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Hoxa9P09631 D230030E09Rik-201ENSMUST00000222459 884 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Hoxa9P09631 Grcc10-201ENSMUST00000004389 863 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Hoxa9P09631 Spsb2-202ENSMUST00000052727 1219 ntAPPRIS P1 TSL 3 BASIC17.54■□□□□ 0.4
Hoxa9P09631 Nkx2-9-201ENSMUST00000072631 1264 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Hoxa9P09631 Lce1i-201ENSMUST00000090866 731 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Hoxa9P09631 Gm10819-201ENSMUST00000099988 561 ntBASIC17.54■□□□□ 0.4
Hoxa9P09631 B3galnt2-207ENSMUST00000221974 2439 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Hoxa9P09631 Agbl5-209ENSMUST00000201225 2646 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Hoxa9P09631 Acvr1c-204ENSMUST00000112608 1497 ntAPPRIS ALT2 TSL 5 BASIC17.54■□□□□ 0.4
Hoxa9P09631 Zc3h15-201ENSMUST00000081591 2111 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Hoxa9P09631 Ubtf-204ENSMUST00000107117 3258 ntAPPRIS ALT2 TSL 5 BASIC17.53■□□□□ 0.4
Hoxa9P09631 Podxl2-202ENSMUST00000061262 2195 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
Hoxa9P09631 1300014J16Rik-201ENSMUST00000219015 1337 ntBASIC17.53■□□□□ 0.4
Hoxa9P09631 Adcy3-202ENSMUST00000124505 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Hoxa9P09631 Sqstm1-201ENSMUST00000015981 2673 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Hoxa9P09631 A230050P20Rik-201ENSMUST00000043911 1683 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Hoxa9P09631 Mir142hg-201ENSMUST00000123700 269 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Hoxa9P09631 Gm25016-201ENSMUST00000158399 131 ntBASIC17.53■□□□□ 0.4
Hoxa9P09631 Flg-203ENSMUST00000178695 777 ntAPPRIS P5 BASIC17.53■□□□□ 0.4
Hoxa9P09631 Stx3-208ENSMUST00000211641 1018 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Hoxa9P09631 Fgf9-202ENSMUST00000074654 1198 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Hoxa9P09631 Gm6093-201ENSMUST00000221792 1623 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Hoxa9P09631 Pigu-201ENSMUST00000077626 1636 ntAPPRIS P2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Hoxa9P09631 Lgmn-201ENSMUST00000021607 1990 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Hoxa9P09631 Sptbn4-201ENSMUST00000011895 8747 ntAPPRIS P2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Hoxa9P09631 Dlg1-205ENSMUST00000115201 3248 ntTSL 5 BASIC17.53■□□□□ 0.4
Hoxa9P09631 Nsfl1c-201ENSMUST00000028949 1364 ntAPPRIS ALT1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Hoxa9P09631 Mpdu1-201ENSMUST00000018905 1321 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Hoxa9P09631 Bcs1l-202ENSMUST00000113732 1679 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.4
Hoxa9P09631 Eomes-202ENSMUST00000111763 2869 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
Hoxa9P09631 Rab1b-201ENSMUST00000025804 1835 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Hoxa9P09631 Zfp706-201ENSMUST00000078976 4417 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Hoxa9P09631 Lce1j-201ENSMUST00000107304 420 ntAPPRIS P1 BASIC17.52■□□□□ 0.4
Hoxa9P09631 Hist1h2bj-201ENSMUST00000110452 463 ntAPPRIS P1 BASIC17.52■□□□□ 0.4
Hoxa9P09631 Hist1h2bp-202ENSMUST00000110473 621 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Hoxa9P09631 Pih1d2-201ENSMUST00000000171 1256 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Hoxa9P09631 Hist1h2bm-201ENSMUST00000224651 524 ntAPPRIS P1 BASIC17.52■□□□□ 0.4
Hoxa9P09631 Dctn3-201ENSMUST00000030158 973 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Hoxa9P09631 Plekhf2-201ENSMUST00000054776 2977 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Hoxa9P09631 Arid1b-201ENSMUST00000092723 7150 ntAPPRIS ALT2 TSL 5 BASIC17.52■□□□□ 0.4
Hoxa9P09631 Gtf3a-201ENSMUST00000132102 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
Hoxa9P09631 Mtrf1l-201ENSMUST00000019908 2588 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Hoxa9P09631 Pafah1b1-201ENSMUST00000021091 5803 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Hoxa9P09631 Camsap3-207ENSMUST00000207712 2539 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
Hoxa9P09631 Srsf11-202ENSMUST00000072875 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.39
Hoxa9P09631 Gm15558-201ENSMUST00000126849 2018 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
Hoxa9P09631 Ddx59-201ENSMUST00000027655 2166 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Hoxa9P09631 Cetn4-205ENSMUST00000140956 2981 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
Hoxa9P09631 Tmem136-202ENSMUST00000213544 2463 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Hoxa9P09631 Scamp4-201ENSMUST00000079883 1804 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Hoxa9P09631 Krt86-201ENSMUST00000088049 1960 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Hoxa9P09631 Auh-201ENSMUST00000021913 1320 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Hoxa9P09631 Fcgrt-201ENSMUST00000003512 1770 ntAPPRIS P2 TSL 1 (best) BASIC17.51■□□□□ 0.39
Retrieved 100 of 76,532 protein–RNA pairs in 23.1 ms