Protein–RNA interactions for Protein: P09025

Hoxc8, Homeobox protein Hox-C8, mousemouse

Predictions only

Length 242 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxc8P09025 Fbxo36-201ENSMUST00000097672 901 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Hoxc8P09025 Insig2-201ENSMUST00000003818 2697 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Hoxc8P09025 4833445I07Rik-201ENSMUST00000193193 1642 ntBASIC18.7■□□□□ 0.58
Hoxc8P09025 Tdrd12-201ENSMUST00000032701 1620 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Hoxc8P09025 Gpsm3-201ENSMUST00000038244 1343 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Hoxc8P09025 Prpsap1-201ENSMUST00000106391 1841 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Hoxc8P09025 Fgf11-201ENSMUST00000011285 2534 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Hoxc8P09025 Tmem254b-201ENSMUST00000022418 1447 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Hoxc8P09025 Snrnp35-201ENSMUST00000031349 1115 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Hoxc8P09025 Ache-202ENSMUST00000085934 2176 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Hoxc8P09025 Dbnl-203ENSMUST00000109845 2001 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
Hoxc8P09025 A530016L24Rik-202ENSMUST00000223266 1547 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Hoxc8P09025 Sh3bp1-202ENSMUST00000061239 1917 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Hoxc8P09025 Ncoa5-202ENSMUST00000121377 2930 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Hoxc8P09025 Lrrc43-201ENSMUST00000094327 2046 ntAPPRIS P3 TSL 1 (best) BASIC18.68■□□□□ 0.58
Hoxc8P09025 Yipf3-201ENSMUST00000095263 2035 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Hoxc8P09025 Anapc5-203ENSMUST00000196640 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
Hoxc8P09025 Mir770-201ENSMUST00000103252 94 ntBASIC18.68■□□□□ 0.58
Hoxc8P09025 Tmsb10-202ENSMUST00000114049 690 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Hoxc8P09025 Atg101-201ENSMUST00000048393 1230 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Hoxc8P09025 Ephx4-201ENSMUST00000049146 1279 ntAPPRIS P1 TSL 2 BASIC18.68■□□□□ 0.58
Hoxc8P09025 2810408A11Rik-204ENSMUST00000108621 1455 ntAPPRIS ALT2 TSL 5 BASIC18.68■□□□□ 0.58
Hoxc8P09025 Tnfrsf25-201ENSMUST00000025706 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
Hoxc8P09025 Slc25a16-201ENSMUST00000044977 3145 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Hoxc8P09025 2700081O15Rik-202ENSMUST00000159348 4989 ntAPPRIS P1 TSL 5 BASIC18.68■□□□□ 0.58
Hoxc8P09025 Spg21-202ENSMUST00000213957 1302 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Hoxc8P09025 Yipf2-201ENSMUST00000034700 2174 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Hoxc8P09025 Rhoa-201ENSMUST00000007959 2197 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Hoxc8P09025 Slc7a10-201ENSMUST00000001854 1953 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Hoxc8P09025 Phox2b-201ENSMUST00000012664 3013 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Hoxc8P09025 Pou2f2-202ENSMUST00000108413 1599 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Hoxc8P09025 2810408A11Rik-203ENSMUST00000102580 1640 ntAPPRIS P3 TSL 1 (best) BASIC18.67■□□□□ 0.58
Hoxc8P09025 Cdk10-201ENSMUST00000036880 1642 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Hoxc8P09025 Tyk2-205ENSMUST00000214864 1662 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Hoxc8P09025 Magi2-201ENSMUST00000088516 4843 ntAPPRIS P2 TSL 5 BASIC18.67■□□□□ 0.58
Hoxc8P09025 Gm38534-201ENSMUST00000206566 1909 ntTSL 5 BASIC18.67■□□□□ 0.58
Hoxc8P09025 Dpy30-201ENSMUST00000112571 790 ntAPPRIS P1 TSL 2 BASIC18.67■□□□□ 0.58
Hoxc8P09025 Gpha2-202ENSMUST00000113526 762 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
Hoxc8P09025 Srpx-202ENSMUST00000115543 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
Hoxc8P09025 Gm27742-201ENSMUST00000184667 60 ntBASIC18.67■□□□□ 0.58
Hoxc8P09025 Gpha2-201ENSMUST00000025698 609 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Hoxc8P09025 Rsu1-201ENSMUST00000028059 1546 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Hoxc8P09025 Kmt5b-204ENSMUST00000113970 2975 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
Hoxc8P09025 Nsun2-202ENSMUST00000109699 2834 ntAPPRIS P2 TSL 1 (best) BASIC18.67■□□□□ 0.58
Hoxc8P09025 Hsf4-202ENSMUST00000163734 1630 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Hoxc8P09025 Dmtn-210ENSMUST00000228824 2377 ntBASIC18.67■□□□□ 0.58
Hoxc8P09025 Pknox2-201ENSMUST00000039674 3632 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Hoxc8P09025 Dtwd2-201ENSMUST00000025383 2476 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Hoxc8P09025 Paics-201ENSMUST00000031160 2482 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Hoxc8P09025 Ptgis-202ENSMUST00000088041 1711 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Hoxc8P09025 Ubr5-201ENSMUST00000110336 9242 ntTSL 5 BASIC18.66■□□□□ 0.58
Hoxc8P09025 Mras-203ENSMUST00000122384 1122 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Hoxc8P09025 Gm16075-201ENSMUST00000135873 361 ntTSL 3 BASIC18.66■□□□□ 0.58
Hoxc8P09025 Otx2os1-206ENSMUST00000228153 787 ntBASIC18.66■□□□□ 0.58
Hoxc8P09025 BC049762-201ENSMUST00000054226 760 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Hoxc8P09025 Olfr1232-201ENSMUST00000099785 936 ntAPPRIS P1 BASIC18.66■□□□□ 0.58
Hoxc8P09025 Txnl4b-201ENSMUST00000034159 1890 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Hoxc8P09025 Matk-201ENSMUST00000105328 2228 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
Hoxc8P09025 Slc30a1-201ENSMUST00000044954 5244 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Hoxc8P09025 Acbd4-203ENSMUST00000107040 1959 ntTSL 2 BASIC18.66■□□□□ 0.58
Hoxc8P09025 Rhbdf1-201ENSMUST00000020524 2946 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Hoxc8P09025 Apbb1-219ENSMUST00000191601 2690 ntAPPRIS P4 TSL 5 BASIC18.66■□□□□ 0.58
Hoxc8P09025 Negr1-201ENSMUST00000041425 2095 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Hoxc8P09025 Gcat-202ENSMUST00000171999 1763 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Hoxc8P09025 9330154J02Rik-202ENSMUST00000185960 2557 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Hoxc8P09025 6330411D24Rik-201ENSMUST00000211105 1568 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Hoxc8P09025 Zbtb4-203ENSMUST00000108640 4067 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Hoxc8P09025 1500009L16Rik-201ENSMUST00000150459 1194 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Hoxc8P09025 Samd13-205ENSMUST00000197989 591 ntTSL 5 BASIC18.65■□□□□ 0.58
Hoxc8P09025 Upk3a-201ENSMUST00000023070 1106 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Hoxc8P09025 Ptcra-201ENSMUST00000041012 1283 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Hoxc8P09025 Odf3b-201ENSMUST00000049968 1040 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Hoxc8P09025 Manbal-201ENSMUST00000081202 1107 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Hoxc8P09025 Nfil3-201ENSMUST00000071065 2026 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Hoxc8P09025 Eno1-202ENSMUST00000080926 2027 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Hoxc8P09025 Zbtb25-201ENSMUST00000167011 1681 ntAPPRIS P1 TSL 2 BASIC18.65■□□□□ 0.58
Hoxc8P09025 Pde1b-201ENSMUST00000023132 3218 ntAPPRIS P2 TSL 1 (best) BASIC18.65■□□□□ 0.58
Hoxc8P09025 Skp1a-203ENSMUST00000109072 1754 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
Hoxc8P09025 Isyna1-201ENSMUST00000019283 1836 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Hoxc8P09025 Trim45-202ENSMUST00000094048 1815 ntTSL 5 BASIC18.65■□□□□ 0.58
Hoxc8P09025 Def6-201ENSMUST00000002327 2277 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Hoxc8P09025 Ubald1-201ENSMUST00000037843 1851 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Hoxc8P09025 Cxcl14-202ENSMUST00000224801 1467 ntBASIC18.65■□□□□ 0.58
Hoxc8P09025 Jak2-201ENSMUST00000025705 4947 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.58
Hoxc8P09025 Wnt10b-207ENSMUST00000228594 1510 ntAPPRIS P1 BASIC18.64■□□□□ 0.58
Hoxc8P09025 Agbl5-209ENSMUST00000201225 2646 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
Hoxc8P09025 Hsdl1-201ENSMUST00000036049 3141 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Hoxc8P09025 Zdhhc6-209ENSMUST00000225495 1711 ntBASIC18.64■□□□□ 0.57
Hoxc8P09025 C030037D09Rik-202ENSMUST00000136201 1216 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Hoxc8P09025 Rerg-204ENSMUST00000149100 635 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Hoxc8P09025 Gm6623-201ENSMUST00000173570 544 ntBASIC18.64■□□□□ 0.57
Hoxc8P09025 Snhg4-201ENSMUST00000181664 1190 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Hoxc8P09025 AC156576.2-201ENSMUST00000222752 503 ntTSL 5 BASIC18.64■□□□□ 0.57
Hoxc8P09025 Fam213b-201ENSMUST00000030935 883 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Hoxc8P09025 Spem1-201ENSMUST00000045771 1041 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Hoxc8P09025 Dnaja4-202ENSMUST00000120452 1827 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Hoxc8P09025 Nfatc2-205ENSMUST00000137451 2369 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Hoxc8P09025 Pomgnt2-201ENSMUST00000084743 2365 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Hoxc8P09025 Racgap1-213ENSMUST00000171702 3052 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Hoxc8P09025 Tbcb-201ENSMUST00000006254 1416 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Retrieved 100 of 76,532 protein–RNA pairs in 21.1 ms