Protein–RNA interactions for Protein: P08122

Col4a2, Collagen alpha-2(IV) chain, mousemouse

Predictions only

Length 1,707 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col4a2P08122 Rbms1-209ENSMUST00000164147 2543 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Col4a2P08122 Wbp2-202ENSMUST00000106444 1012 ntTSL 2 BASIC16.31■□□□□ 0.2
Col4a2P08122 1810010H24Rik-201ENSMUST00000106767 1100 ntAPPRIS P2 TSL 2 BASIC16.31■□□□□ 0.2
Col4a2P08122 Gm11355-201ENSMUST00000121120 306 ntBASIC16.31■□□□□ 0.2
Col4a2P08122 Rasl2-9-201ENSMUST00000147835 1013 ntAPPRIS P1 BASIC16.31■□□□□ 0.2
Col4a2P08122 Gm8969-201ENSMUST00000199694 526 ntBASIC16.31■□□□□ 0.2
Col4a2P08122 Hspbp1-201ENSMUST00000079970 1593 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Col4a2P08122 Gm26885-201ENSMUST00000181920 1688 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Col4a2P08122 Gm27029-202ENSMUST00000107259 1855 ntAPPRIS P5 TSL 5 BASIC16.3■□□□□ 0.2
Col4a2P08122 Ola1-201ENSMUST00000028517 2175 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Col4a2P08122 Anapc5-218ENSMUST00000200645 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Col4a2P08122 Rnpc3-203ENSMUST00000106536 1839 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
Col4a2P08122 Hmg20b-213ENSMUST00000167481 1321 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
Col4a2P08122 Fzd5-202ENSMUST00000116133 2895 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Col4a2P08122 Hdgfl3-201ENSMUST00000026094 2865 ntAPPRIS ALT1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Col4a2P08122 Smarcd2-201ENSMUST00000021052 2747 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Col4a2P08122 9030624G23Rik-201ENSMUST00000101538 2245 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Col4a2P08122 Ctnnal1-202ENSMUST00000107612 850 ntTSL 3 BASIC16.3■□□□□ 0.2
Col4a2P08122 Polr2m-202ENSMUST00000163972 2138 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Col4a2P08122 Rpl14-201ENSMUST00000165532 1009 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Col4a2P08122 Flg-207ENSMUST00000180293 768 ntAPPRIS ALT2 BASIC16.3■□□□□ 0.2
Col4a2P08122 Gm3272-201ENSMUST00000181181 1229 ntBASIC16.3■□□□□ 0.2
Col4a2P08122 Gm10566-201ENSMUST00000086739 996 ntBASIC16.3■□□□□ 0.2
Col4a2P08122 Spg7-209ENSMUST00000149248 2896 ntAPPRIS P2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Col4a2P08122 Tmem136-202ENSMUST00000213544 2463 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Col4a2P08122 Trim25-202ENSMUST00000100627 1433 ntTSL 5 BASIC16.3■□□□□ 0.2
Col4a2P08122 Meg3-201ENSMUST00000124106 1988 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Col4a2P08122 Krt86-201ENSMUST00000088049 1960 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Col4a2P08122 Fam126a-202ENSMUST00000101513 1679 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Col4a2P08122 Tmed4-201ENSMUST00000004508 2003 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Col4a2P08122 Pou2f2-205ENSMUST00000108417 1937 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Col4a2P08122 A930001A20Rik-201ENSMUST00000182586 1366 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Col4a2P08122 Ndufaf8-201ENSMUST00000106223 781 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Col4a2P08122 Znhit2-201ENSMUST00000162726 1281 ntAPPRIS P1 BASIC16.29■□□□□ 0.2
Col4a2P08122 0610025J13Rik-203ENSMUST00000180374 713 ntTSL 5 BASIC16.29■□□□□ 0.2
Col4a2P08122 Pdcd2l-201ENSMUST00000002710 1295 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Col4a2P08122 Htr6-202ENSMUST00000105802 2341 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
Col4a2P08122 Shc3-201ENSMUST00000021898 1537 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Col4a2P08122 3110043O21Rik-203ENSMUST00000108127 3193 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Col4a2P08122 Trim54-202ENSMUST00000202769 1408 ntAPPRIS ALT1 TSL 5 BASIC16.29■□□□□ 0.2
Col4a2P08122 Nfil3-201ENSMUST00000071065 2026 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Col4a2P08122 Gm20460-201ENSMUST00000168709 1572 ntTSL 5 BASIC16.29■□□□□ 0.2
Col4a2P08122 Camk2b-202ENSMUST00000019133 2223 ntTSL 5 BASIC16.29■□□□□ 0.2
Col4a2P08122 Gm7008-201ENSMUST00000038121 1366 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Col4a2P08122 Il9r-204ENSMUST00000142396 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Col4a2P08122 Pemt-203ENSMUST00000102693 961 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Col4a2P08122 Cyp4f41-ps-201ENSMUST00000126790 1077 ntBASIC16.28■□□□□ 0.2
Col4a2P08122 Gm37722-201ENSMUST00000193757 208 ntBASIC16.28■□□□□ 0.2
Col4a2P08122 BC048679-203ENSMUST00000207871 567 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Col4a2P08122 AC133598.3-202ENSMUST00000224219 531 ntBASIC16.28■□□□□ 0.2
Col4a2P08122 Irak1bp1-201ENSMUST00000034783 1159 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Col4a2P08122 Tspan10-201ENSMUST00000044105 1680 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Col4a2P08122 Sdcbp-201ENSMUST00000029912 2745 ntAPPRIS ALT1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Col4a2P08122 Isyna1-201ENSMUST00000019283 1836 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Col4a2P08122 Hmgb3-202ENSMUST00000072699 1571 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Col4a2P08122 Fam105a-203ENSMUST00000226170 3043 ntBASIC16.28■□□□□ 0.2
Col4a2P08122 Mboat1-201ENSMUST00000047311 2905 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Col4a2P08122 Rac1-202ENSMUST00000100489 2325 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Col4a2P08122 Pgs1-203ENSMUST00000132676 2863 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Col4a2P08122 Prcc-201ENSMUST00000005015 2099 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Col4a2P08122 Bud23-202ENSMUST00000085984 1516 ntAPPRIS P2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Col4a2P08122 Gm26644-201ENSMUST00000181365 958 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Col4a2P08122 Jagn1-202ENSMUST00000204254 1147 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Col4a2P08122 Flt3l-206ENSMUST00000210197 834 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
Col4a2P08122 Otx2os1-206ENSMUST00000228153 787 ntBASIC16.28■□□□□ 0.2
Col4a2P08122 Ifi27l2b-201ENSMUST00000044687 1093 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Col4a2P08122 Tmem198-202ENSMUST00000113575 2185 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Col4a2P08122 Magix-201ENSMUST00000115695 1342 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Col4a2P08122 Nat8f3-202ENSMUST00000168531 1347 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Col4a2P08122 Tdrd12-201ENSMUST00000032701 1620 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Col4a2P08122 9330154J02Rik-202ENSMUST00000185960 2557 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Col4a2P08122 Eme2-202ENSMUST00000121542 1521 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Col4a2P08122 Hspb6-201ENSMUST00000044048 1363 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Col4a2P08122 Fam222a-201ENSMUST00000043650 2930 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Col4a2P08122 Hmga1-204ENSMUST00000118570 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Col4a2P08122 Pagr1a-202ENSMUST00000200948 1430 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Col4a2P08122 Gm42742-205ENSMUST00000202798 1412 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Col4a2P08122 Hikeshi-206ENSMUST00000153470 2224 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Col4a2P08122 Rps27a-202ENSMUST00000102845 791 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Col4a2P08122 Fndc11-202ENSMUST00000108835 1154 ntAPPRIS P1 TSL 2 BASIC16.27■□□□□ 0.19
Col4a2P08122 Gm14964-202ENSMUST00000149574 716 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
Col4a2P08122 AC120002.2-201ENSMUST00000220205 773 ntBASIC16.27■□□□□ 0.19
Col4a2P08122 Nudt1-201ENSMUST00000050205 954 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Col4a2P08122 Nudt1-202ENSMUST00000071881 952 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Col4a2P08122 Pdgfa-203ENSMUST00000110896 1363 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
Col4a2P08122 Mmp11-201ENSMUST00000000924 2288 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Col4a2P08122 Tsc22d1-201ENSMUST00000022587 1762 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Col4a2P08122 Tmem241-205ENSMUST00000209859 1426 ntAPPRIS P4 TSL 1 (best) BASIC16.26■□□□□ 0.19
Col4a2P08122 Zbtb8a-201ENSMUST00000030610 2321 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Col4a2P08122 2810004N23Rik-201ENSMUST00000034465 2340 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Col4a2P08122 Tpm2-203ENSMUST00000107914 1164 ntAPPRIS ALT1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Col4a2P08122 Srgn-205ENSMUST00000162161 694 ntAPPRIS P1 TSL 3 BASIC16.26■□□□□ 0.19
Col4a2P08122 Gm29103-201ENSMUST00000191034 598 ntTSL 5 BASIC16.26■□□□□ 0.19
Col4a2P08122 Gm44771-201ENSMUST00000206975 626 ntBASIC16.26■□□□□ 0.19
Col4a2P08122 Zfp524-203ENSMUST00000209030 1128 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
Col4a2P08122 Mgarp-201ENSMUST00000038154 1232 ntAPPRIS P2 TSL 1 (best) BASIC16.26■□□□□ 0.19
Col4a2P08122 Gsx2-201ENSMUST00000040477 1665 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Col4a2P08122 Pacsin1-204ENSMUST00000114873 1857 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Col4a2P08122 Actl10-201ENSMUST00000104928 1501 ntAPPRIS P1 BASIC16.26■□□□□ 0.19
Col4a2P08122 Gpd1-203ENSMUST00000162194 1515 ntTSL 5 BASIC16.26■□□□□ 0.19
Retrieved 100 of 76,532 protein–RNA pairs in 20.7 ms