Protein–RNA interactions for Protein: P04214

T-cell receptor beta chain V region E1, mousemouse

Predictions only

Length 136 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P04214 Tnks2-201ENSMUST00000025729 6481 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
P04214 Klhl33-201ENSMUST00000164415 1602 ntTSL 5 BASIC18.34■□□□□ 0.53
P04214 4930447C04Rik-201ENSMUST00000044000 2051 ntAPPRIS P2 TSL 1 (best) BASIC18.34■□□□□ 0.53
P04214 Neurl4-213ENSMUST00000177476 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.53
P04214 Cryl1-201ENSMUST00000022517 1497 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
P04214 Carm1-202ENSMUST00000115394 3320 ntAPPRIS ALT2 TSL 5 BASIC18.33■□□□□ 0.53
P04214 Tbcb-201ENSMUST00000006254 1416 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
P04214 Ubl7-201ENSMUST00000163329 1364 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.53
P04214 Tubb4b-ps1-201ENSMUST00000179460 1336 ntBASIC18.33■□□□□ 0.53
P04214 Rxrb-201ENSMUST00000044858 2623 ntAPPRIS P4 TSL 1 (best) BASIC18.33■□□□□ 0.53
P04214 Gm28626-201ENSMUST00000187004 520 ntTSL 2 BASIC18.33■□□□□ 0.52
P04214 Ptcra-201ENSMUST00000041012 1283 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
P04214 Noxa1-201ENSMUST00000044018 1617 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.52
P04214 Aldh7a1-201ENSMUST00000066208 1914 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.52
P04214 Shc3-201ENSMUST00000021898 1537 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
P04214 Cldn6-201ENSMUST00000024699 1506 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
P04214 Rpap3-201ENSMUST00000023104 2260 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
P04214 Minpp1-201ENSMUST00000025827 2619 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
P04214 Myef2-209ENSMUST00000152367 2071 ntAPPRIS P4 TSL 1 (best) BASIC18.32■□□□□ 0.52
P04214 Serac1-201ENSMUST00000024570 2033 ntAPPRIS P3 TSL 1 (best) BASIC18.32■□□□□ 0.52
P04214 Vangl2-203ENSMUST00000111264 2349 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
P04214 2810468N07Rik-201ENSMUST00000163493 1349 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
P04214 Gpr142-202ENSMUST00000106584 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
P04214 Mrps18c-203ENSMUST00000112901 820 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
P04214 Gm28577-201ENSMUST00000176106 741 ntTSL 5 BASIC18.32■□□□□ 0.52
P04214 Mir8098-201ENSMUST00000184011 137 ntBASIC18.32■□□□□ 0.52
P04214 Gm32031-203ENSMUST00000208993 649 ntTSL 2 BASIC18.32■□□□□ 0.52
P04214 AC124569.2-201ENSMUST00000225998 818 ntBASIC18.32■□□□□ 0.52
P04214 Gpr142-201ENSMUST00000045319 1098 ntAPPRIS P3 TSL 1 (best) BASIC18.32■□□□□ 0.52
P04214 Aida-206ENSMUST00000193625 1810 ntTSL 3 BASIC18.32■□□□□ 0.52
P04214 Cdk4-201ENSMUST00000006911 2053 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
P04214 Srsf1-201ENSMUST00000079866 2948 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
P04214 4930426D05Rik-202ENSMUST00000139804 1650 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
P04214 Sh3yl1-202ENSMUST00000110880 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
P04214 Sephs1-202ENSMUST00000115019 2933 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
P04214 Cbfb-202ENSMUST00000109392 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC18.31■□□□□ 0.52
P04214 Adal-203ENSMUST00000110662 1231 ntTSL 5 BASIC18.31■□□□□ 0.52
P04214 2310009B15Rik-201ENSMUST00000112025 565 ntAPPRIS P1 TSL 2 BASIC18.31■□□□□ 0.52
P04214 Gm13884-201ENSMUST00000118103 829 ntBASIC18.31■□□□□ 0.52
P04214 Mis18bp1-202ENSMUST00000124201 717 ntTSL 3 BASIC18.31■□□□□ 0.52
P04214 Prr3-202ENSMUST00000165613 767 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
P04214 Acaa1a-203ENSMUST00000175743 1219 ntTSL 5 BASIC18.31■□□□□ 0.52
P04214 Acaa1a-207ENSMUST00000176397 996 ntTSL 5 BASIC18.31■□□□□ 0.52
P04214 AW822252-206ENSMUST00000208904 237 ntBASIC18.31■□□□□ 0.52
P04214 Cklf-201ENSMUST00000034342 667 ntAPPRIS P4 TSL 1 (best) BASIC18.31■□□□□ 0.52
P04214 Sftpb-201ENSMUST00000070437 1131 ntAPPRIS ALT2 TSL 5 BASIC18.31■□□□□ 0.52
P04214 Sult2b1-201ENSMUST00000075571 1193 ntAPPRIS P2 TSL 1 (best) BASIC18.31■□□□□ 0.52
P04214 Gm26885-201ENSMUST00000181920 1688 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
P04214 Mthfd2-201ENSMUST00000005810 2085 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
P04214 Gcat-202ENSMUST00000171999 1763 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
P04214 Naa60-212ENSMUST00000186375 2424 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
P04214 Cenpw-201ENSMUST00000099985 1532 ntAPPRIS P2 TSL 1 (best) BASIC18.3■□□□□ 0.52
P04214 Trp73-203ENSMUST00000105643 1916 ntAPPRIS ALT2 TSL 5 BASIC18.3■□□□□ 0.52
P04214 Bex1-203ENSMUST00000113120 718 ntAPPRIS P1 TSL 3 BASIC18.3■□□□□ 0.52
P04214 Rnf5-201ENSMUST00000015622 1238 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
P04214 C630004M23Rik-201ENSMUST00000194765 1682 ntBASIC18.3■□□□□ 0.52
P04214 Sim1-202ENSMUST00000219436 1687 ntTSL 5 BASIC18.3■□□□□ 0.52
P04214 Sqor-201ENSMUST00000005953 1804 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
P04214 Golph3-205ENSMUST00000228671 2842 ntBASIC18.3■□□□□ 0.52
P04214 Celf6-203ENSMUST00000118549 2973 ntAPPRIS ALT2 TSL 5 BASIC18.3■□□□□ 0.52
P04214 Krt15-201ENSMUST00000107411 1700 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
P04214 Atp5c1-202ENSMUST00000114896 1735 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
P04214 Rdx-202ENSMUST00000061352 1502 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
P04214 Chst8-203ENSMUST00000154629 2079 ntTSL 5 BASIC18.29■□□□□ 0.52
P04214 Gm27029-202ENSMUST00000107259 1855 ntAPPRIS P5 TSL 5 BASIC18.29■□□□□ 0.52
P04214 Tesmin-201ENSMUST00000025840 2234 ntAPPRIS P3 TSL 1 (best) BASIC18.29■□□□□ 0.52
P04214 Rora-202ENSMUST00000113624 2591 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
P04214 Fam19a5-201ENSMUST00000068088 2575 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
P04214 Gm12895-201ENSMUST00000122214 226 ntBASIC18.29■□□□□ 0.52
P04214 Edf1-201ENSMUST00000015236 722 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
P04214 Gm43347-201ENSMUST00000200226 580 ntBASIC18.29■□□□□ 0.52
P04214 Lrrfip1-201ENSMUST00000068116 2050 ntAPPRIS ALT2 TSL 5 BASIC18.29■□□□□ 0.52
P04214 Gpr137-201ENSMUST00000025909 1717 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
P04214 Ppp1r3g-203ENSMUST00000225537 2389 ntAPPRIS P1 BASIC18.28■□□□□ 0.52
P04214 Kcnn2-208ENSMUST00000211323 2046 ntAPPRIS P2 TSL 1 (best) BASIC18.28■□□□□ 0.52
P04214 Zcchc24-201ENSMUST00000069180 4556 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
P04214 Hs3st5-202ENSMUST00000167191 2408 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
P04214 Nat9-203ENSMUST00000103040 1204 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
P04214 Nat9-204ENSMUST00000103041 953 ntAPPRIS P1 TSL 5 BASIC18.28■□□□□ 0.52
P04214 Crct1-202ENSMUST00000107301 460 ntAPPRIS P1 TSL 2 BASIC18.28■□□□□ 0.52
P04214 Lhx1os-201ENSMUST00000126072 589 ntTSL 3 BASIC18.28■□□□□ 0.52
P04214 Rpp40-202ENSMUST00000174230 1053 ntTSL 5 BASIC18.28■□□□□ 0.52
P04214 A830052D11Rik-201ENSMUST00000181729 1130 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
P04214 Arl5b-206ENSMUST00000193836 481 ntTSL 2 BASIC18.28■□□□□ 0.52
P04214 Gm40457-201ENSMUST00000205319 1174 ntTSL 5 BASIC18.28■□□□□ 0.52
P04214 Lce3c-201ENSMUST00000055375 567 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
P04214 Strn3-201ENSMUST00000013130 3046 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
P04214 Fbxo17-203ENSMUST00000108279 1563 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
P04214 Klhdc1-201ENSMUST00000063445 2620 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
P04214 Rcor1-201ENSMUST00000084968 5684 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
P04214 Hras-201ENSMUST00000026572 2828 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
P04214 Fnbp1-205ENSMUST00000113552 1910 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
P04214 Rcan3-201ENSMUST00000030606 5111 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
P04214 4930474H06Rik-201ENSMUST00000132822 1590 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
P04214 Mtch2-205ENSMUST00000136872 2596 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
P04214 Hotairm1-202ENSMUST00000132559 713 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
P04214 Sema6d-204ENSMUST00000078621 6372 ntTSL 5 BASIC18.27■□□□□ 0.52
P04214 Sgta-201ENSMUST00000005067 1969 ntAPPRIS P2 TSL 1 (best) BASIC18.27■□□□□ 0.52
P04214 Agfg1-205ENSMUST00000187899 2078 ntTSL 5 BASIC18.27■□□□□ 0.51
P04214 9330171B17Rik-201ENSMUST00000035939 2073 ntBASIC18.27■□□□□ 0.51
Retrieved 100 of 76,532 protein–RNA pairs in 22.8 ms