Protein–RNA interactions for Protein: P02831

Hoxa3, Homeobox protein Hox-A3, mousemouse

Predictions only

Length 443 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxa3P02831 Klhl36-201ENSMUST00000034287 2181 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Hoxa3P02831 Podxl2-202ENSMUST00000061262 2195 ntAPPRIS P3 TSL 1 (best) BASIC14.65□□□□□ -0.06
Hoxa3P02831 Gm7712-202ENSMUST00000222331 1510 ntBASIC14.65□□□□□ -0.06
Hoxa3P02831 Actr3-201ENSMUST00000027579 2554 ntAPPRIS P1 TSL 5 BASIC14.65□□□□□ -0.06
Hoxa3P02831 Ripor2-202ENSMUST00000058009 2550 ntAPPRIS ALT2 TSL 2 BASIC14.65□□□□□ -0.06
Hoxa3P02831 Pitx2-201ENSMUST00000029657 1680 ntTSL 5 BASIC14.65□□□□□ -0.06
Hoxa3P02831 Ppp1r3g-203ENSMUST00000225537 2389 ntAPPRIS P1 BASIC14.65□□□□□ -0.07
Hoxa3P02831 Slc30a5-205ENSMUST00000225922 2722 ntAPPRIS ALT2 BASIC14.65□□□□□ -0.07
Hoxa3P02831 H2-DMa-201ENSMUST00000042121 1555 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Hoxa3P02831 Prkaca-201ENSMUST00000005606 2276 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Hoxa3P02831 Zfp804a-201ENSMUST00000047527 4620 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Hoxa3P02831 Trim58-201ENSMUST00000075084 2192 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Hoxa3P02831 Nuak1-201ENSMUST00000020220 5558 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Hoxa3P02831 Tmem94-202ENSMUST00000103033 5238 ntAPPRIS P2 TSL 2 BASIC14.64□□□□□ -0.07
Hoxa3P02831 Map7d2-203ENSMUST00000112471 3670 ntAPPRIS P3 TSL 5 BASIC14.64□□□□□ -0.07
Hoxa3P02831 Bsg-202ENSMUST00000105381 1240 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
Hoxa3P02831 Tnnt2-202ENSMUST00000112085 1076 ntAPPRIS ALT2 TSL 5 BASIC14.64□□□□□ -0.07
Hoxa3P02831 Tnnt2-203ENSMUST00000112086 1094 ntAPPRIS ALT2 TSL 5 BASIC14.64□□□□□ -0.07
Hoxa3P02831 Tnnt2-204ENSMUST00000112087 1112 ntAPPRIS ALT2 TSL 5 BASIC14.64□□□□□ -0.07
Hoxa3P02831 Gm13836-201ENSMUST00000121159 501 ntBASIC14.64□□□□□ -0.07
Hoxa3P02831 Igflr1-202ENSMUST00000172251 1224 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
Hoxa3P02831 Tnnt2-206ENSMUST00000178854 1076 ntAPPRIS ALT2 TSL 5 BASIC14.64□□□□□ -0.07
Hoxa3P02831 Tnnt2-211ENSMUST00000189355 1112 ntAPPRIS ALT2 TSL 5 BASIC14.64□□□□□ -0.07
Hoxa3P02831 Tnnt2-212ENSMUST00000189732 1123 ntAPPRIS ALT2 TSL 5 BASIC14.64□□□□□ -0.07
Hoxa3P02831 Arhgef4-208ENSMUST00000211073 171 ntBASIC14.64□□□□□ -0.07
Hoxa3P02831 AC153845.2-202ENSMUST00000213372 807 ntTSL 3 BASIC14.64□□□□□ -0.07
Hoxa3P02831 4932443I19Rik-204ENSMUST00000214337 1212 ntAPPRIS ALT2 TSL 5 BASIC14.64□□□□□ -0.07
Hoxa3P02831 Lce1m-201ENSMUST00000029520 874 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Hoxa3P02831 Sft2d2-201ENSMUST00000043338 5535 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Hoxa3P02831 Ddit4-201ENSMUST00000020308 1755 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Hoxa3P02831 Bcat2-201ENSMUST00000033098 1772 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Hoxa3P02831 Slc35e1-202ENSMUST00000152080 4383 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Hoxa3P02831 Rnf157-201ENSMUST00000100202 4619 ntAPPRIS P2 TSL 1 (best) BASIC14.64□□□□□ -0.07
Hoxa3P02831 Ddx59-201ENSMUST00000027655 2166 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Hoxa3P02831 Dynll2-202ENSMUST00000107923 2443 ntAPPRIS P1 TSL 3 BASIC14.64□□□□□ -0.07
Hoxa3P02831 Arhgef7-205ENSMUST00000110909 4926 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
Hoxa3P02831 Gm11373-201ENSMUST00000129791 2819 ntTSL 5 BASIC14.64□□□□□ -0.07
Hoxa3P02831 1810043G02Rik-201ENSMUST00000105397 1818 ntAPPRIS P2 TSL 1 (best) BASIC14.64□□□□□ -0.07
Hoxa3P02831 Ttpal-202ENSMUST00000109408 1999 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Hoxa3P02831 Rxra-201ENSMUST00000077257 4905 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Hoxa3P02831 Cnot11-201ENSMUST00000003219 3162 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Hoxa3P02831 Tbc1d9-202ENSMUST00000093393 5334 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Hoxa3P02831 Whrn-206ENSMUST00000102867 4013 ntAPPRIS ALT2 TSL 1 (best) BASIC14.63□□□□□ -0.07
Hoxa3P02831 Golga7-202ENSMUST00000121783 1945 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Hoxa3P02831 Sprtn-201ENSMUST00000034467 4464 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Hoxa3P02831 Hist1h2bh-201ENSMUST00000224359 1679 ntAPPRIS P1 BASIC14.63□□□□□ -0.07
Hoxa3P02831 Tmed5-204ENSMUST00000118036 1045 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
Hoxa3P02831 Nrn1-202ENSMUST00000122286 691 ntTSL 3 BASIC14.63□□□□□ -0.07
Hoxa3P02831 Gm20403-201ENSMUST00000173803 372 ntAPPRIS P1 BASIC14.63□□□□□ -0.07
Hoxa3P02831 Aldh1a3-204ENSMUST00000174215 1066 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
Hoxa3P02831 Nme4-201ENSMUST00000025007 912 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Hoxa3P02831 Tm2d1-201ENSMUST00000030292 952 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
Hoxa3P02831 Ncoa1-201ENSMUST00000085814 7329 ntAPPRIS P2 TSL 1 (best) BASIC14.63□□□□□ -0.07
Hoxa3P02831 Ints8-202ENSMUST00000108318 3169 ntTSL 5 BASIC14.63□□□□□ -0.07
Hoxa3P02831 Chtop-203ENSMUST00000076639 1842 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
Hoxa3P02831 C030014I23Rik-201ENSMUST00000080911 1810 ntBASIC14.63□□□□□ -0.07
Hoxa3P02831 Ntng1-204ENSMUST00000106571 1446 ntTSL 5 BASIC14.63□□□□□ -0.07
Hoxa3P02831 Ntng1-210ENSMUST00000138953 1443 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
Hoxa3P02831 Gm43702-201ENSMUST00000198772 2546 ntBASIC14.63□□□□□ -0.07
Hoxa3P02831 Cspg5-205ENSMUST00000199736 2107 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
Hoxa3P02831 Lrrc14-204ENSMUST00000137649 2832 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Hoxa3P02831 Crocc-203ENSMUST00000102491 6582 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Hoxa3P02831 Mtrf1l-201ENSMUST00000019908 2588 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Hoxa3P02831 Kdm5b-203ENSMUST00000112198 5413 ntAPPRIS ALT2 TSL 1 (best) BASIC14.63□□□□□ -0.07
Hoxa3P02831 Amfr-201ENSMUST00000053766 3880 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Hoxa3P02831 Gnas-222ENSMUST00000180362 1645 ntTSL 5 BASIC14.63□□□□□ -0.07
Hoxa3P02831 Srcin1-203ENSMUST00000107596 7054 ntAPPRIS P2 TSL 1 (best) BASIC14.62□□□□□ -0.07
Hoxa3P02831 Gm21949-201ENSMUST00000182006 2369 ntAPPRIS P1 TSL 2 BASIC14.62□□□□□ -0.07
Hoxa3P02831 Eif6-201ENSMUST00000029142 1500 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Hoxa3P02831 Azi2-207ENSMUST00000134433 2499 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Hoxa3P02831 Gm7977-201ENSMUST00000193787 748 ntBASIC14.62□□□□□ -0.07
Hoxa3P02831 Gm43799-201ENSMUST00000201845 579 ntBASIC14.62□□□□□ -0.07
Hoxa3P02831 AC153881.2-201ENSMUST00000214877 204 ntBASIC14.62□□□□□ -0.07
Hoxa3P02831 Btg1-202ENSMUST00000218953 668 ntTSL 2 BASIC14.62□□□□□ -0.07
Hoxa3P02831 Otx2os1-204ENSMUST00000227221 751 ntBASIC14.62□□□□□ -0.07
Hoxa3P02831 Chka-201ENSMUST00000025760 2319 ntAPPRIS ALT2 TSL 5 BASIC14.62□□□□□ -0.07
Hoxa3P02831 H2afz-201ENSMUST00000041045 1069 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Hoxa3P02831 Grhpr-201ENSMUST00000045078 1280 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Hoxa3P02831 Col17a1-202ENSMUST00000086923 5477 ntAPPRIS P3 TSL 1 (best) BASIC14.62□□□□□ -0.07
Hoxa3P02831 Pea15a-201ENSMUST00000013842 2501 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Hoxa3P02831 Armc10-202ENSMUST00000095495 2700 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Hoxa3P02831 Hsf5-201ENSMUST00000093956 4158 ntAPPRIS P1 TSL 5 BASIC14.62□□□□□ -0.07
Hoxa3P02831 Rundc3a-202ENSMUST00000107102 1837 ntAPPRIS ALT2 TSL 5 BASIC14.62□□□□□ -0.07
Hoxa3P02831 Nfib-206ENSMUST00000107248 3294 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Hoxa3P02831 Fjx1-201ENSMUST00000099678 3134 ntAPPRIS P1 BASIC14.61□□□□□ -0.07
Hoxa3P02831 Rasal2-201ENSMUST00000078308 10047 ntAPPRIS P2 TSL 1 (best) BASIC14.61□□□□□ -0.07
Hoxa3P02831 P2rx2-201ENSMUST00000058016 1895 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
Hoxa3P02831 Hoxc9-201ENSMUST00000001706 2374 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Hoxa3P02831 Mrpl10-201ENSMUST00000001485 1708 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Hoxa3P02831 Myo5a-214ENSMUST00000155282 6372 ntAPPRIS P5 TSL 5 BASIC14.61□□□□□ -0.07
Hoxa3P02831 Atg16l2-202ENSMUST00000122116 2083 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
Hoxa3P02831 Smim14-202ENSMUST00000121661 1056 ntAPPRIS P1 TSL 3 BASIC14.61□□□□□ -0.07
Hoxa3P02831 Rcbtb2-217ENSMUST00000167401 868 ntTSL 5 BASIC14.61□□□□□ -0.07
Hoxa3P02831 Prr23a1-201ENSMUST00000170349 883 ntAPPRIS P1 BASIC14.61□□□□□ -0.07
Hoxa3P02831 Rab28-205ENSMUST00000202913 863 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Hoxa3P02831 Tomm20-202ENSMUST00000212771 458 ntTSL 2 BASIC14.61□□□□□ -0.07
Hoxa3P02831 Sec11c-201ENSMUST00000025394 807 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Hoxa3P02831 Txndc5-201ENSMUST00000035988 2843 ntAPPRIS P3 TSL 1 (best) BASIC14.61□□□□□ -0.07
Hoxa3P02831 Nfatc3-201ENSMUST00000109308 5984 ntAPPRIS P2 TSL 1 (best) BASIC14.61□□□□□ -0.07
Hoxa3P02831 Tbx3os2-201ENSMUST00000135385 1345 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Retrieved 100 of 76,532 protein–RNA pairs in 21.1 ms