Protein–RNA interactions for Protein: P02463

Col4a1, Collagen alpha-1(IV) chain, mousemouse

Predictions only

Length 1,669 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col4a1P02463 Trim45-202ENSMUST00000094048 1815 ntTSL 5 BASIC21.56■■□□□ 1.04
Col4a1P02463 Camsap3-212ENSMUST00000208240 2572 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
Col4a1P02463 BC048679-203ENSMUST00000207871 567 ntAPPRIS ALT2 TSL 1 (best) BASIC21.56■■□□□ 1.04
Col4a1P02463 Gm17949-201ENSMUST00000210548 1179 ntAPPRIS P1 TSL 5 BASIC21.56■■□□□ 1.04
Col4a1P02463 Mfsd4a-203ENSMUST00000112370 2565 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
Col4a1P02463 Slbp-203ENSMUST00000101354 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC21.55■■□□□ 1.04
Col4a1P02463 Zdhhc6-207ENSMUST00000224897 2168 ntAPPRIS P1 BASIC21.55■■□□□ 1.04
Col4a1P02463 Pfn2-201ENSMUST00000066882 2342 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Col4a1P02463 Tmem245-202ENSMUST00000107609 2643 ntAPPRIS P2 TSL 5 BASIC21.55■■□□□ 1.04
Col4a1P02463 Fkbp5-201ENSMUST00000079413 3542 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Col4a1P02463 Echdc2-203ENSMUST00000116307 893 ntTSL 5 BASIC21.55■■□□□ 1.04
Col4a1P02463 Rnf5-201ENSMUST00000015622 1238 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Col4a1P02463 4932702P03Rik-201ENSMUST00000138447 1482 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
Col4a1P02463 Rsu1-201ENSMUST00000028059 1546 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Col4a1P02463 Erich2-201ENSMUST00000100041 1749 ntAPPRIS P2 TSL 1 (best) BASIC21.55■■□□□ 1.04
Col4a1P02463 Dnaja4-202ENSMUST00000120452 1827 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Col4a1P02463 Cxcl14-201ENSMUST00000021970 1827 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Col4a1P02463 Kcnk3-201ENSMUST00000066295 3811 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Col4a1P02463 Zfp523-202ENSMUST00000073534 2654 ntAPPRIS P1 TSL 5 BASIC21.54■■□□□ 1.04
Col4a1P02463 Hdhd2-202ENSMUST00000097521 1716 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
Col4a1P02463 Hspb6-201ENSMUST00000044048 1363 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
Col4a1P02463 Ndufaf8-201ENSMUST00000106223 781 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
Col4a1P02463 Gm17092-201ENSMUST00000166606 698 ntTSL 2 BASIC21.54■■□□□ 1.04
Col4a1P02463 Samd13-205ENSMUST00000197989 591 ntTSL 5 BASIC21.54■■□□□ 1.04
Col4a1P02463 Pomgnt2-207ENSMUST00000217610 2413 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
Col4a1P02463 Slc16a10-202ENSMUST00000213488 2325 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
Col4a1P02463 Matn4-204ENSMUST00000109359 2179 ntTSL 5 BASIC21.54■■□□□ 1.04
Col4a1P02463 Tmed4-201ENSMUST00000004508 2003 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
Col4a1P02463 Isyna1-204ENSMUST00000210005 1914 ntAPPRIS P1 TSL 5 BASIC21.54■■□□□ 1.04
Col4a1P02463 4833445I07Rik-201ENSMUST00000193193 1642 ntBASIC21.54■■□□□ 1.04
Col4a1P02463 Haus4-201ENSMUST00000022784 1587 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
Col4a1P02463 Gpd1l-201ENSMUST00000084853 1436 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
Col4a1P02463 U2af2-201ENSMUST00000005041 2183 ntAPPRIS ALT1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Col4a1P02463 Tpm2-203ENSMUST00000107914 1164 ntAPPRIS ALT1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Col4a1P02463 Tfpt-202ENSMUST00000108641 1166 ntAPPRIS ALT2 TSL 1 (best) BASIC21.53■■□□□ 1.04
Col4a1P02463 Acaa1a-203ENSMUST00000175743 1219 ntTSL 5 BASIC21.53■■□□□ 1.04
Col4a1P02463 Acaa1a-207ENSMUST00000176397 996 ntTSL 5 BASIC21.53■■□□□ 1.04
Col4a1P02463 Snrnp35-201ENSMUST00000031349 1115 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Col4a1P02463 AC125311.2-201ENSMUST00000227477 1940 ntBASIC21.53■■□□□ 1.04
Col4a1P02463 Pip5k1c-202ENSMUST00000105327 2551 ntAPPRIS P3 TSL 1 (best) BASIC21.53■■□□□ 1.04
Col4a1P02463 Ccdc91-201ENSMUST00000032441 2459 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Col4a1P02463 Pou2f2-202ENSMUST00000108413 1599 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
Col4a1P02463 A530016L24Rik-202ENSMUST00000223266 1547 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
Col4a1P02463 Stard6-201ENSMUST00000114959 1496 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Col4a1P02463 Ubtf-210ENSMUST00000174302 4692 ntAPPRIS P3 TSL 5 BASIC21.53■■□□□ 1.04
Col4a1P02463 Laptm4b-201ENSMUST00000022867 1902 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Col4a1P02463 C030037D09Rik-202ENSMUST00000136201 1216 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
Col4a1P02463 Spem1-201ENSMUST00000045771 1041 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Col4a1P02463 Fbxo36-201ENSMUST00000097672 901 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Col4a1P02463 Snrnp48-201ENSMUST00000091641 1785 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Col4a1P02463 Ptgis-202ENSMUST00000088041 1711 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
Col4a1P02463 Il17rb-201ENSMUST00000016110 2061 ntAPPRIS P2 TSL 1 (best) BASIC21.52■■□□□ 1.04
Col4a1P02463 Cyth2-202ENSMUST00000107729 2519 ntAPPRIS P2 TSL 1 (best) BASIC21.52■■□□□ 1.04
Col4a1P02463 Mrm1-201ENSMUST00000018549 2477 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
Col4a1P02463 Lrrc43-201ENSMUST00000094327 2046 ntAPPRIS P3 TSL 1 (best) BASIC21.52■■□□□ 1.04
Col4a1P02463 Cenpw-201ENSMUST00000099985 1532 ntAPPRIS P2 TSL 1 (best) BASIC21.52■■□□□ 1.04
Col4a1P02463 Fez2-201ENSMUST00000070039 1939 ntAPPRIS P3 TSL 1 (best) BASIC21.52■■□□□ 1.04
Col4a1P02463 Rilp-201ENSMUST00000042972 1489 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
Col4a1P02463 Tbcb-201ENSMUST00000006254 1416 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
Col4a1P02463 Hikeshi-206ENSMUST00000153470 2224 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
Col4a1P02463 Rtkn-201ENSMUST00000065512 2191 ntAPPRIS ALT2 TSL 1 (best) BASIC21.52■■□□□ 1.04
Col4a1P02463 Arfip1-202ENSMUST00000107687 1714 ntTSL 5 BASIC21.52■■□□□ 1.04
Col4a1P02463 Gm27000-201ENSMUST00000182943 842 ntBASIC21.52■■□□□ 1.04
Col4a1P02463 4933412L11Rik-201ENSMUST00000203702 1044 ntBASIC21.52■■□□□ 1.04
Col4a1P02463 Gm34391-201ENSMUST00000203706 907 ntBASIC21.52■■□□□ 1.04
Col4a1P02463 AC133598.3-202ENSMUST00000224219 531 ntBASIC21.52■■□□□ 1.04
Col4a1P02463 Fam213b-201ENSMUST00000030935 883 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
Col4a1P02463 Tmem205-201ENSMUST00000046831 785 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
Col4a1P02463 BC049762-201ENSMUST00000054226 760 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
Col4a1P02463 Cdk10-201ENSMUST00000036880 1642 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
Col4a1P02463 Aqp5-202ENSMUST00000169082 1551 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
Col4a1P02463 2810425M01Rik-201ENSMUST00000180790 1850 ntTSL 5 BASIC21.52■■□□□ 1.04
Col4a1P02463 H2-Q7-202ENSMUST00000076256 1523 ntAPPRIS ALT2 TSL 5 BASIC21.52■■□□□ 1.04
Col4a1P02463 Gcat-202ENSMUST00000171999 1763 ntTSL 1 (best) BASIC21.52■■□□□ 1.03
Col4a1P02463 Pced1a-202ENSMUST00000110277 1689 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
Col4a1P02463 Arhgef1-204ENSMUST00000117796 3508 ntAPPRIS ALT2 TSL 1 (best) BASIC21.51■■□□□ 1.03
Col4a1P02463 Hmg20b-204ENSMUST00000122993 1502 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
Col4a1P02463 Zkscan4-202ENSMUST00000225845 1506 ntBASIC21.51■■□□□ 1.03
Col4a1P02463 Scarb1-201ENSMUST00000086075 2521 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
Col4a1P02463 Gm3468-201ENSMUST00000165193 1955 ntAPPRIS P1 TSL 5 BASIC21.51■■□□□ 1.03
Col4a1P02463 Gm2956-201ENSMUST00000177786 1955 ntAPPRIS P1 TSL 5 BASIC21.51■■□□□ 1.03
Col4a1P02463 Ino80e-201ENSMUST00000050833 1944 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
Col4a1P02463 Rdx-202ENSMUST00000061352 1502 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
Col4a1P02463 Hgsnat-201ENSMUST00000037609 2694 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Col4a1P02463 Gpha2-202ENSMUST00000113526 762 ntAPPRIS P1 TSL 5 BASIC21.5■■□□□ 1.03
Col4a1P02463 Upk3a-201ENSMUST00000023070 1106 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Col4a1P02463 Gpha2-201ENSMUST00000025698 609 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Col4a1P02463 Manbal-201ENSMUST00000081202 1107 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Col4a1P02463 Tbc1d25-204ENSMUST00000172020 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC21.5■■□□□ 1.03
Col4a1P02463 Vhl-201ENSMUST00000035673 2792 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Col4a1P02463 Cmip-202ENSMUST00000166750 2408 ntAPPRIS P1 TSL 5 BASIC21.5■■□□□ 1.03
Col4a1P02463 3110002H16Rik-201ENSMUST00000025276 2170 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Col4a1P02463 P2ry2-204ENSMUST00000207916 2372 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Col4a1P02463 Wnt10b-207ENSMUST00000228594 1510 ntAPPRIS P1 BASIC21.5■■□□□ 1.03
Col4a1P02463 Aldh7a1-201ENSMUST00000066208 1914 ntAPPRIS P3 TSL 1 (best) BASIC21.5■■□□□ 1.03
Col4a1P02463 Gm16897-201ENSMUST00000180780 2492 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
Col4a1P02463 Dpy30-201ENSMUST00000112571 790 ntAPPRIS P1 TSL 2 BASIC21.5■■□□□ 1.03
Col4a1P02463 Gm16295-201ENSMUST00000139512 643 ntTSL 3 BASIC21.5■■□□□ 1.03
Col4a1P02463 Rerg-204ENSMUST00000149100 635 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
Col4a1P02463 Atp6v0b-208ENSMUST00000150204 935 ntTSL 5 BASIC21.5■■□□□ 1.03
Retrieved 100 of 76,532 protein–RNA pairs in 21.7 ms