Protein–RNA interactions for Protein: O89016

Abcd4, ATP-binding cassette sub-family D member 4, mousemouse

Predictions only

Length 606 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Abcd4O89016 Smim22-201ENSMUST00000178155 429 ntAPPRIS P3 TSL 1 (best) BASIC15.81■□□□□ 0.12
Abcd4O89016 Gm7977-201ENSMUST00000193787 748 ntBASIC15.81■□□□□ 0.12
Abcd4O89016 Chpt1-201ENSMUST00000020253 3898 ntAPPRIS P3 TSL 1 (best) BASIC15.81■□□□□ 0.12
Abcd4O89016 Gm15635-204ENSMUST00000208024 2539 ntBASIC15.81■□□□□ 0.12
Abcd4O89016 Scrn2-201ENSMUST00000021249 1530 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Abcd4O89016 Crebbp-201ENSMUST00000023165 10820 ntAPPRIS P2 TSL 1 (best) BASIC15.81■□□□□ 0.12
Abcd4O89016 Cdca3-201ENSMUST00000024270 1976 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Abcd4O89016 Atp23-201ENSMUST00000026504 903 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Abcd4O89016 Kank3-201ENSMUST00000048560 2641 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Abcd4O89016 Nme2-202ENSMUST00000072566 734 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Abcd4O89016 Map3k1-201ENSMUST00000109267 6978 ntAPPRIS P1 TSL 2 BASIC15.81■□□□□ 0.12
Abcd4O89016 Osgin2-201ENSMUST00000037198 2658 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Abcd4O89016 Nrl-201ENSMUST00000062232 2504 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Abcd4O89016 Tmem136-202ENSMUST00000213544 2463 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Abcd4O89016 A930012L18Rik-201ENSMUST00000181094 2364 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Abcd4O89016 Snx14-205ENSMUST00000173011 2238 ntTSL 5 BASIC15.8■□□□□ 0.12
Abcd4O89016 Gm45244-201ENSMUST00000211328 2200 ntBASIC15.8■□□□□ 0.12
Abcd4O89016 Slc25a26-201ENSMUST00000061118 1922 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Abcd4O89016 Gm44544-201ENSMUST00000207052 1844 ntBASIC15.8■□□□□ 0.12
Abcd4O89016 Tsc22d1-201ENSMUST00000022587 1762 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Abcd4O89016 4930432B10Rik-202ENSMUST00000181330 1612 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Abcd4O89016 Slc35g2-201ENSMUST00000093792 1590 ntAPPRIS P1 TSL 2 BASIC15.8■□□□□ 0.12
Abcd4O89016 Rhod-202ENSMUST00000117462 1495 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Abcd4O89016 Gm6598-201ENSMUST00000202719 2615 ntBASIC15.8■□□□□ 0.12
Abcd4O89016 U2af1-201ENSMUST00000014684 907 ntAPPRIS P3 TSL 1 (best) BASIC15.8■□□□□ 0.12
Abcd4O89016 U2af1-202ENSMUST00000166526 907 ntAPPRIS ALT2 TSL 2 BASIC15.8■□□□□ 0.12
Abcd4O89016 Nudt22-203ENSMUST00000180765 1073 ntAPPRIS P1 TSL 5 BASIC15.8■□□□□ 0.12
Abcd4O89016 AC153881.2-201ENSMUST00000214877 204 ntBASIC15.8■□□□□ 0.12
Abcd4O89016 AC122465.1-201ENSMUST00000220813 1209 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Abcd4O89016 Grhpr-201ENSMUST00000045078 1280 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Abcd4O89016 Ly6g6d-201ENSMUST00000007259 546 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Abcd4O89016 Cyth2-201ENSMUST00000056820 2527 ntAPPRIS ALT1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Abcd4O89016 Msx2-201ENSMUST00000021922 2453 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Abcd4O89016 Rgl2-201ENSMUST00000047503 3252 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Abcd4O89016 Cdca4-202ENSMUST00000220899 1994 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Abcd4O89016 Man2a2-201ENSMUST00000098346 6554 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Abcd4O89016 Atp8b2-201ENSMUST00000069805 5559 ntAPPRIS ALT2 TSL 5 BASIC15.8■□□□□ 0.12
Abcd4O89016 Ube2cbp-201ENSMUST00000034986 1790 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Abcd4O89016 Cds2-202ENSMUST00000103181 8396 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Abcd4O89016 Nrxn2-203ENSMUST00000113459 3285 ntTSL 2 BASIC15.79■□□□□ 0.12
Abcd4O89016 Arid1a-205ENSMUST00000145664 8187 ntAPPRIS ALT2 TSL 2 BASIC15.79■□□□□ 0.12
Abcd4O89016 Slc25a39-202ENSMUST00000107098 1606 ntAPPRIS ALT1 TSL 5 BASIC15.79■□□□□ 0.12
Abcd4O89016 Prodh-201ENSMUST00000003620 2385 ntAPPRIS P2 TSL 1 (best) BASIC15.79■□□□□ 0.12
Abcd4O89016 Crlf3-201ENSMUST00000061283 2396 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Abcd4O89016 Acsl3-205ENSMUST00000142704 2976 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Abcd4O89016 Gnao1-201ENSMUST00000034198 2948 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Abcd4O89016 Gm9194-201ENSMUST00000220749 1447 ntBASIC15.79■□□□□ 0.12
Abcd4O89016 Chst2-201ENSMUST00000036267 7328 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Abcd4O89016 Tjp1-202ENSMUST00000102592 7049 ntAPPRIS P3 TSL 1 (best) BASIC15.79■□□□□ 0.12
Abcd4O89016 Gm11643-201ENSMUST00000119578 864 ntBASIC15.79■□□□□ 0.12
Abcd4O89016 Gm15723-201ENSMUST00000139331 600 ntTSL 3 BASIC15.79■□□□□ 0.12
Abcd4O89016 Prlh-201ENSMUST00000166281 276 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Abcd4O89016 Sct-202ENSMUST00000167790 507 ntAPPRIS P3 TSL 1 (best) BASIC15.79■□□□□ 0.12
Abcd4O89016 2310033P09Rik-201ENSMUST00000020719 1285 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Abcd4O89016 Arhgef4-208ENSMUST00000211073 171 ntBASIC15.79■□□□□ 0.12
Abcd4O89016 AC153845.2-202ENSMUST00000213372 807 ntTSL 3 BASIC15.79■□□□□ 0.12
Abcd4O89016 Tbc1d7-201ENSMUST00000021797 1239 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Abcd4O89016 Nme4-201ENSMUST00000025007 912 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Abcd4O89016 Nudt8-202ENSMUST00000025802 787 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Abcd4O89016 Sct-201ENSMUST00000046156 534 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
Abcd4O89016 Zfp764-201ENSMUST00000059199 2508 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Abcd4O89016 Rundc3a-202ENSMUST00000107102 1837 ntAPPRIS ALT2 TSL 5 BASIC15.79■□□□□ 0.12
Abcd4O89016 Fezf1-201ENSMUST00000031709 2409 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Abcd4O89016 Smarca4-202ENSMUST00000098948 6376 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
Abcd4O89016 Tfdp2-209ENSMUST00000188750 1713 ntAPPRIS ALT2 TSL 5 BASIC15.79■□□□□ 0.12
Abcd4O89016 Rae1-201ENSMUST00000029013 1742 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Abcd4O89016 Srsf11-202ENSMUST00000072875 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
Abcd4O89016 Etv5-201ENSMUST00000079601 3975 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Abcd4O89016 Adam33-201ENSMUST00000052104 2795 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
Abcd4O89016 Acot1-201ENSMUST00000168120 2272 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Abcd4O89016 Tnnt2-202ENSMUST00000112085 1076 ntAPPRIS ALT2 TSL 5 BASIC15.78■□□□□ 0.12
Abcd4O89016 Tnnt2-203ENSMUST00000112086 1094 ntAPPRIS ALT2 TSL 5 BASIC15.78■□□□□ 0.12
Abcd4O89016 Tnnt2-204ENSMUST00000112087 1112 ntAPPRIS ALT2 TSL 5 BASIC15.78■□□□□ 0.12
Abcd4O89016 Pdxdc1-203ENSMUST00000115803 1268 ntAPPRIS ALT2 TSL 5 BASIC15.78■□□□□ 0.12
Abcd4O89016 Tnnt2-206ENSMUST00000178854 1076 ntAPPRIS ALT2 TSL 5 BASIC15.78■□□□□ 0.12
Abcd4O89016 Tnnt2-211ENSMUST00000189355 1112 ntAPPRIS ALT2 TSL 5 BASIC15.78■□□□□ 0.12
Abcd4O89016 Tnnt2-212ENSMUST00000189732 1123 ntAPPRIS ALT2 TSL 5 BASIC15.78■□□□□ 0.12
Abcd4O89016 Gm37292-201ENSMUST00000192062 758 ntBASIC15.78■□□□□ 0.12
Abcd4O89016 Gm16042-201ENSMUST00000204813 1247 ntBASIC15.78■□□□□ 0.12
Abcd4O89016 Tomm20-202ENSMUST00000212771 458 ntTSL 2 BASIC15.78■□□□□ 0.12
Abcd4O89016 AC156016.1-201ENSMUST00000227190 1035 ntBASIC15.78■□□□□ 0.12
Abcd4O89016 Mpp3-203ENSMUST00000107167 2066 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Abcd4O89016 Efnb2-201ENSMUST00000001319 4793 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Abcd4O89016 Mtcp1-201ENSMUST00000033542 1592 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Abcd4O89016 Bmp8a-202ENSMUST00000102641 1917 ntAPPRIS P3 TSL 1 (best) BASIC15.78■□□□□ 0.12
Abcd4O89016 Smad5-203ENSMUST00000109876 4570 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Abcd4O89016 Cacna1b-202ENSMUST00000070864 9655 ntAPPRIS P3 TSL 5 BASIC15.78■□□□□ 0.12
Abcd4O89016 Gm26689-201ENSMUST00000180927 1818 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Abcd4O89016 Gm26553-201ENSMUST00000181531 1818 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Abcd4O89016 Creg1-202ENSMUST00000111432 2163 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Abcd4O89016 Arhgef19-201ENSMUST00000006618 3414 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Abcd4O89016 Il4i1-201ENSMUST00000033015 2048 ntAPPRIS P3 TSL 1 (best) BASIC15.77■□□□□ 0.12
Abcd4O89016 Fuz-201ENSMUST00000071207 1698 ntAPPRIS P2 TSL 1 (best) BASIC15.77■□□□□ 0.12
Abcd4O89016 Pacsin3-203ENSMUST00000111349 1993 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Abcd4O89016 Dnajb3-201ENSMUST00000119972 1051 ntAPPRIS P1 BASIC15.77■□□□□ 0.12
Abcd4O89016 Nsl1-203ENSMUST00000139340 837 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
Abcd4O89016 2210408F21Rik-211ENSMUST00000151800 750 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
Abcd4O89016 Gm26643-201ENSMUST00000180854 1274 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
Abcd4O89016 Uqcr11-201ENSMUST00000020372 445 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Abcd4O89016 Timm23-208ENSMUST00000226683 750 ntBASIC15.77■□□□□ 0.12
Retrieved 100 of 76,532 protein–RNA pairs in 39.6 ms