Protein–RNA interactions for Protein: O88890

Sh2d1a, SH2 domain-containing protein 1A, mousemouse

Predictions only

Length 126 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh2d1aO88890 Pantr1-210ENSMUST00000185599 343 ntTSL 3 BASIC12.37□□□□□ -0.43
Sh2d1aO88890 Gm36033-202ENSMUST00000214827 745 ntTSL 2 BASIC12.37□□□□□ -0.43
Sh2d1aO88890 Cmtm7-204ENSMUST00000216760 665 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Sh2d1aO88890 Dnajb2-201ENSMUST00000055223 1199 ntTSL 5 BASIC12.37□□□□□ -0.43
Sh2d1aO88890 Agrn-206ENSMUST00000180572 6891 ntAPPRIS P1 TSL 5 BASIC12.37□□□□□ -0.43
Sh2d1aO88890 Rnf112-202ENSMUST00000060255 3161 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Sh2d1aO88890 Ppm1b-202ENSMUST00000112304 3262 ntAPPRIS P3 TSL 1 (best) BASIC12.37□□□□□ -0.43
Sh2d1aO88890 Ncoa5-203ENSMUST00000122070 3117 ntTSL 5 BASIC12.37□□□□□ -0.43
Sh2d1aO88890 Fam98a-201ENSMUST00000112507 2817 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Sh2d1aO88890 Gm29514-202ENSMUST00000186665 2214 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Sh2d1aO88890 Hjurp-202ENSMUST00000065420 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Sh2d1aO88890 Htra3-202ENSMUST00000114233 1901 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Sh2d1aO88890 Sh3rf3-205ENSMUST00000153031 5682 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Sh2d1aO88890 Pon1-201ENSMUST00000002663 1513 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Sh2d1aO88890 Bean1-201ENSMUST00000093245 3199 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Sh2d1aO88890 Shroom4-202ENSMUST00000103005 4839 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Sh2d1aO88890 Dcaf8-206ENSMUST00000192704 2859 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Sh2d1aO88890 Gm20604-201ENSMUST00000174651 2795 ntAPPRIS P1 TSL 2 BASIC12.36□□□□□ -0.43
Sh2d1aO88890 4930503L19Rik-201ENSMUST00000067556 2291 ntAPPRIS P2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Sh2d1aO88890 Sorcs3-201ENSMUST00000078880 5634 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Sh2d1aO88890 Fxyd6-203ENSMUST00000217381 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Sh2d1aO88890 Lins1-203ENSMUST00000121777 2729 ntAPPRIS P3 TSL 2 BASIC12.36□□□□□ -0.43
Sh2d1aO88890 Ckap4-202ENSMUST00000167671 2606 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Sh2d1aO88890 Rrp9-201ENSMUST00000047721 1586 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Sh2d1aO88890 Nsfl1c-203ENSMUST00000103160 1369 ntTSL 5 BASIC12.36□□□□□ -0.43
Sh2d1aO88890 Stmn4-202ENSMUST00000118426 1281 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Sh2d1aO88890 Acsl3-205ENSMUST00000142704 2976 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Sh2d1aO88890 1700067K01Rik-203ENSMUST00000172548 986 ntAPPRIS P2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Sh2d1aO88890 4931413I07Rik-201ENSMUST00000173637 764 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Sh2d1aO88890 Gm44210-201ENSMUST00000205253 713 ntTSL 3 BASIC12.36□□□□□ -0.43
Sh2d1aO88890 Nfu1-201ENSMUST00000032060 948 ntAPPRIS P3 TSL 1 (best) BASIC12.36□□□□□ -0.43
Sh2d1aO88890 Zfp580-201ENSMUST00000069324 1096 ntAPPRIS P2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Sh2d1aO88890 Selenom-201ENSMUST00000094469 707 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Sh2d1aO88890 Gm10602-201ENSMUST00000098239 609 ntBASIC12.36□□□□□ -0.43
Sh2d1aO88890 Ino80e-201ENSMUST00000050833 1944 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Sh2d1aO88890 Shisa7-201ENSMUST00000066041 6006 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Sh2d1aO88890 Bcar1-201ENSMUST00000166232 3142 ntAPPRIS P3 TSL 1 (best) BASIC12.36□□□□□ -0.43
Sh2d1aO88890 Slc30a10-201ENSMUST00000061093 5836 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Sh2d1aO88890 Ankle1-202ENSMUST00000120725 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Sh2d1aO88890 H2-Q7-202ENSMUST00000076256 1523 ntAPPRIS ALT2 TSL 5 BASIC12.36□□□□□ -0.43
Sh2d1aO88890 Nkiras2-201ENSMUST00000017981 2097 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Sh2d1aO88890 Fam104a-201ENSMUST00000120194 2619 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Sh2d1aO88890 Tekt1-201ENSMUST00000021155 1447 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Sh2d1aO88890 Slc7a5-201ENSMUST00000045557 3517 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Sh2d1aO88890 Inppl1-201ENSMUST00000035836 4995 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Sh2d1aO88890 Setdb2-202ENSMUST00000111253 1774 ntTSL 2 BASIC12.35□□□□□ -0.43
Sh2d1aO88890 Ddit4-201ENSMUST00000020308 1755 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Sh2d1aO88890 Rnf38-203ENSMUST00000102934 5240 ntAPPRIS P1 TSL 5 BASIC12.35□□□□□ -0.43
Sh2d1aO88890 Agxt-201ENSMUST00000027491 1553 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Sh2d1aO88890 Smad1-202ENSMUST00000066091 3099 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Sh2d1aO88890 Ocel1-202ENSMUST00000110051 2179 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Sh2d1aO88890 Thumpd3-201ENSMUST00000032398 2163 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Sh2d1aO88890 Igf2-205ENSMUST00000121128 4722 ntTSL 2 BASIC12.35□□□□□ -0.43
Sh2d1aO88890 Lyrm4-201ENSMUST00000053265 2086 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Sh2d1aO88890 Dnajc19-204ENSMUST00000120805 551 ntTSL 2 BASIC12.35□□□□□ -0.43
Sh2d1aO88890 Tpsg1-204ENSMUST00000160920 867 ntTSL 3 BASIC12.35□□□□□ -0.43
Sh2d1aO88890 Cracr2b-207ENSMUST00000170879 1158 ntAPPRIS ALT2 TSL 5 BASIC12.35□□□□□ -0.43
Sh2d1aO88890 Gm26524-201ENSMUST00000192339 390 ntBASIC12.35□□□□□ -0.43
Sh2d1aO88890 Gm42882-201ENSMUST00000201788 506 ntTSL 3 BASIC12.35□□□□□ -0.43
Sh2d1aO88890 Prmt1-205ENSMUST00000207659 945 ntTSL 5 BASIC12.35□□□□□ -0.43
Sh2d1aO88890 Gm44549-201ENSMUST00000208351 577 ntBASIC12.35□□□□□ -0.43
Sh2d1aO88890 Rab3c-203ENSMUST00000224180 967 ntBASIC12.35□□□□□ -0.43
Sh2d1aO88890 Slc7a10-201ENSMUST00000001854 1953 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Sh2d1aO88890 Hikeshi-206ENSMUST00000153470 2224 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Sh2d1aO88890 Pacsin3-215ENSMUST00000168916 1859 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Sh2d1aO88890 Pacsin3-201ENSMUST00000028694 1862 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Sh2d1aO88890 Arhgap8-201ENSMUST00000006029 1527 ntAPPRIS P1 TSL 5 BASIC12.35□□□□□ -0.43
Sh2d1aO88890 Nsmf-202ENSMUST00000074422 2824 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Sh2d1aO88890 Gm43859-201ENSMUST00000200075 1412 ntBASIC12.35□□□□□ -0.43
Sh2d1aO88890 Cnksr2-201ENSMUST00000026750 5738 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Sh2d1aO88890 Sart3-201ENSMUST00000019118 4447 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Sh2d1aO88890 Hpca-202ENSMUST00000095807 1666 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Sh2d1aO88890 Ripor2-205ENSMUST00000110384 5608 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Sh2d1aO88890 Baz1a-205ENSMUST00000173433 5788 ntAPPRIS P2 TSL 5 BASIC12.35□□□□□ -0.43
Sh2d1aO88890 Ppt2-204ENSMUST00000168391 1342 ntAPPRIS P1 TSL 5 BASIC12.35□□□□□ -0.43
Sh2d1aO88890 Ppme1-201ENSMUST00000032963 2772 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Sh2d1aO88890 Ecel1-204ENSMUST00000161002 3033 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Sh2d1aO88890 Nudcd2-201ENSMUST00000020578 1577 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Sh2d1aO88890 Kctd12-202ENSMUST00000184744 6057 ntAPPRIS P1 BASIC12.34□□□□□ -0.43
Sh2d1aO88890 C430049E01Rik-201ENSMUST00000207913 1820 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Sh2d1aO88890 Fam120c-201ENSMUST00000073364 5463 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Sh2d1aO88890 Mef2d-201ENSMUST00000001455 5401 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Sh2d1aO88890 Camk2b-202ENSMUST00000019133 2223 ntTSL 5 BASIC12.34□□□□□ -0.43
Sh2d1aO88890 Ercc6l2-203ENSMUST00000067821 2743 ntAPPRIS P1 TSL 5 BASIC12.34□□□□□ -0.43
Sh2d1aO88890 Cspg5-205ENSMUST00000199736 2107 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Sh2d1aO88890 Ubald1-201ENSMUST00000037843 1851 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Sh2d1aO88890 Crebl2-201ENSMUST00000046303 3629 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Sh2d1aO88890 Amigo2-201ENSMUST00000053106 2871 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Sh2d1aO88890 Aqp5-201ENSMUST00000088200 1376 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Sh2d1aO88890 Syngap1-204ENSMUST00000194598 6011 ntAPPRIS P2 TSL 5 BASIC12.34□□□□□ -0.43
Sh2d1aO88890 Eif6-201ENSMUST00000029142 1500 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Sh2d1aO88890 Bsg-202ENSMUST00000105381 1240 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Sh2d1aO88890 Mrpl52-201ENSMUST00000010550 418 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Sh2d1aO88890 Gm15648-201ENSMUST00000149681 778 ntTSL 5 BASIC12.34□□□□□ -0.43
Sh2d1aO88890 Boll-203ENSMUST00000159398 658 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Sh2d1aO88890 Rell2-204ENSMUST00000163591 1057 ntTSL 5 BASIC12.34□□□□□ -0.43
Sh2d1aO88890 Ndufa12-204ENSMUST00000179990 566 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Sh2d1aO88890 1700003N22Rik-201ENSMUST00000194834 808 ntBASIC12.34□□□□□ -0.43
Sh2d1aO88890 Timp4-202ENSMUST00000205131 945 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Sh2d1aO88890 AC061963.1-203ENSMUST00000213473 453 ntTSL 3 BASIC12.34□□□□□ -0.43
Retrieved 100 of 76,532 protein–RNA pairs in 18.8 ms