Protein–RNA interactions for Protein: O88472

Tnfrsf17, Tumor necrosis factor receptor superfamily member 17, mousemouse

Predictions only

Length 185 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfrsf17O88472 Pcbp1-201ENSMUST00000053015 1830 ntAPPRIS P1 BASIC16.22■□□□□ 0.19
Tnfrsf17O88472 Nr2f1-201ENSMUST00000091458 3207 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Tnfrsf17O88472 Asph-217ENSMUST00000146441 2576 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Tnfrsf17O88472 Oraov1-203ENSMUST00000105895 1016 ntAPPRIS ALT2 TSL 2 BASIC16.22■□□□□ 0.19
Tnfrsf17O88472 Mcub-204ENSMUST00000153506 1005 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Tnfrsf17O88472 Erdr1-203ENSMUST00000179077 887 ntAPPRIS ALT2 TSL 5 BASIC16.22■□□□□ 0.19
Tnfrsf17O88472 Gm37025-201ENSMUST00000195159 829 ntBASIC16.22■□□□□ 0.19
Tnfrsf17O88472 1700025J12Rik-201ENSMUST00000205586 630 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Tnfrsf17O88472 Pts-206ENSMUST00000214873 511 ntTSL 5 BASIC16.22■□□□□ 0.19
Tnfrsf17O88472 Actl10-201ENSMUST00000104928 1501 ntAPPRIS P1 BASIC16.22■□□□□ 0.19
Tnfrsf17O88472 Actl10-202ENSMUST00000226583 1501 ntBASIC16.22■□□□□ 0.19
Tnfrsf17O88472 Syt5-201ENSMUST00000065957 1750 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Tnfrsf17O88472 Golph3-202ENSMUST00000226517 2359 ntBASIC16.22■□□□□ 0.19
Tnfrsf17O88472 Ankrd40-203ENSMUST00000107818 3487 ntAPPRIS P3 TSL 5 BASIC16.22■□□□□ 0.19
Tnfrsf17O88472 Arf1-202ENSMUST00000163300 1991 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Tnfrsf17O88472 Gm38345-201ENSMUST00000192635 1748 ntBASIC16.22■□□□□ 0.19
Tnfrsf17O88472 Ttc9-202ENSMUST00000218362 4754 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Tnfrsf17O88472 Ngrn-201ENSMUST00000117989 1317 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Tnfrsf17O88472 Phldb3-201ENSMUST00000073325 2273 ntAPPRIS P1 TSL 5 BASIC16.21■□□□□ 0.19
Tnfrsf17O88472 Usp36-201ENSMUST00000092382 5609 ntAPPRIS P1 TSL 5 BASIC16.21■□□□□ 0.19
Tnfrsf17O88472 Kcnn2-208ENSMUST00000211323 2046 ntAPPRIS P2 TSL 1 (best) BASIC16.21■□□□□ 0.19
Tnfrsf17O88472 AI846148-201ENSMUST00000025924 3183 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Tnfrsf17O88472 Gal3st1-201ENSMUST00000063004 1879 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Tnfrsf17O88472 Fkbp9-201ENSMUST00000031795 3009 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Tnfrsf17O88472 Mcmbp-202ENSMUST00000119081 2347 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Tnfrsf17O88472 Mrpl9-201ENSMUST00000029786 1612 ntAPPRIS P2 TSL 1 (best) BASIC16.21■□□□□ 0.19
Tnfrsf17O88472 Gm1401-201ENSMUST00000122048 772 ntBASIC16.21■□□□□ 0.19
Tnfrsf17O88472 Scpep1os-201ENSMUST00000139592 811 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Tnfrsf17O88472 Syne4-208ENSMUST00000176304 1006 ntAPPRIS ALT2 TSL 5 BASIC16.21■□□□□ 0.19
Tnfrsf17O88472 Gm26549-201ENSMUST00000181112 1209 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Tnfrsf17O88472 Ssr2-205ENSMUST00000193934 569 ntTSL 3 BASIC16.21■□□□□ 0.19
Tnfrsf17O88472 Gm2213-201ENSMUST00000197485 688 ntBASIC16.21■□□□□ 0.19
Tnfrsf17O88472 Gm33054-201ENSMUST00000216588 313 ntTSL 5 BASIC16.21■□□□□ 0.19
Tnfrsf17O88472 AC153889.1-201ENSMUST00000219257 330 ntBASIC16.21■□□□□ 0.19
Tnfrsf17O88472 Tbcc-201ENSMUST00000040434 1164 ntAPPRIS P1 BASIC16.21■□□□□ 0.19
Tnfrsf17O88472 Serf2-201ENSMUST00000099475 525 ntTSL 2 BASIC16.21■□□□□ 0.19
Tnfrsf17O88472 Gp5-201ENSMUST00000061190 2196 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Tnfrsf17O88472 Tatdn2-201ENSMUST00000089018 3096 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.19
Tnfrsf17O88472 Agtpbp1-222ENSMUST00000171606 3037 ntTSL 1 (best) BASIC16.21■□□□□ 0.18
Tnfrsf17O88472 Dapk1-207ENSMUST00000226059 5009 ntBASIC16.21■□□□□ 0.18
Tnfrsf17O88472 Gprc5c-201ENSMUST00000021071 2200 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.18
Tnfrsf17O88472 Spint1-203ENSMUST00000110817 2323 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Tnfrsf17O88472 Fstl3-201ENSMUST00000020575 1955 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Tnfrsf17O88472 Gm16861-201ENSMUST00000181498 1647 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Tnfrsf17O88472 Lpar3-201ENSMUST00000039164 2464 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Tnfrsf17O88472 Drap1-202ENSMUST00000113673 744 ntTSL 2 BASIC16.2■□□□□ 0.18
Tnfrsf17O88472 Echdc2-203ENSMUST00000116307 893 ntTSL 5 BASIC16.2■□□□□ 0.18
Tnfrsf17O88472 Gm44924-201ENSMUST00000138087 421 ntTSL 3 BASIC16.2■□□□□ 0.18
Tnfrsf17O88472 Tex30-213ENSMUST00000156392 1122 ntAPPRIS P1 TSL 5 BASIC16.2■□□□□ 0.18
Tnfrsf17O88472 Mfap2-203ENSMUST00000166376 890 ntAPPRIS P1 TSL 2 BASIC16.2■□□□□ 0.18
Tnfrsf17O88472 Gm2431-201ENSMUST00000171531 519 ntAPPRIS P1 TSL 5 BASIC16.2■□□□□ 0.18
Tnfrsf17O88472 Gm27217-201ENSMUST00000183438 882 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Tnfrsf17O88472 4933412L11Rik-201ENSMUST00000203702 1044 ntBASIC16.2■□□□□ 0.18
Tnfrsf17O88472 Adprh-201ENSMUST00000002923 1583 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Tnfrsf17O88472 Tmie-201ENSMUST00000050958 2802 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Tnfrsf17O88472 Dcbld1-201ENSMUST00000069004 3024 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Tnfrsf17O88472 Slc25a26-201ENSMUST00000061118 1922 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Tnfrsf17O88472 1700003E16Rik-201ENSMUST00000032106 2020 ntAPPRIS P1 TSL 5 BASIC16.19■□□□□ 0.18
Tnfrsf17O88472 Tra2a-204ENSMUST00000204189 1777 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Tnfrsf17O88472 Bcs1l-202ENSMUST00000113732 1679 ntAPPRIS P1 TSL 5 BASIC16.19■□□□□ 0.18
Tnfrsf17O88472 Crebbp-201ENSMUST00000023165 10820 ntAPPRIS P2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Tnfrsf17O88472 Park7-203ENSMUST00000105674 937 ntAPPRIS P1 TSL 5 BASIC16.19■□□□□ 0.18
Tnfrsf17O88472 2210408F21Rik-212ENSMUST00000152157 490 ntTSL 2 BASIC16.19■□□□□ 0.18
Tnfrsf17O88472 Gm8000-201ENSMUST00000188378 592 ntBASIC16.19■□□□□ 0.18
Tnfrsf17O88472 Gm21057-201ENSMUST00000206022 670 ntTSL 3 BASIC16.19■□□□□ 0.18
Tnfrsf17O88472 Hmgb1-rs17-201ENSMUST00000210634 972 ntBASIC16.19■□□□□ 0.18
Tnfrsf17O88472 Nek4-204ENSMUST00000226833 1252 ntAPPRIS ALT2 BASIC16.19■□□□□ 0.18
Tnfrsf17O88472 Cda-201ENSMUST00000030535 846 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Tnfrsf17O88472 Rnf169-201ENSMUST00000080817 7147 ntAPPRIS P1 TSL 5 BASIC16.19■□□□□ 0.18
Tnfrsf17O88472 Cdkl3-204ENSMUST00000109077 2605 ntAPPRIS ALT2 TSL 5 BASIC16.19■□□□□ 0.18
Tnfrsf17O88472 Nptx1-201ENSMUST00000026670 5217 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Tnfrsf17O88472 Atf4-201ENSMUST00000109605 1724 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Tnfrsf17O88472 Cpne7-201ENSMUST00000037900 2398 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Tnfrsf17O88472 Gm3667-201ENSMUST00000171906 2053 ntAPPRIS P1 TSL 5 BASIC16.18■□□□□ 0.18
Tnfrsf17O88472 Myd88-201ENSMUST00000035092 1960 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Tnfrsf17O88472 Tor3a-207ENSMUST00000188964 1750 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Tnfrsf17O88472 Map3k9-201ENSMUST00000035987 4564 ntAPPRIS P2 TSL 1 (best) BASIC16.18■□□□□ 0.18
Tnfrsf17O88472 Ncoa5-202ENSMUST00000121377 2930 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Tnfrsf17O88472 Lmo4-207ENSMUST00000196264 1263 ntTSL 5 BASIC16.18■□□□□ 0.18
Tnfrsf17O88472 Rpl13a-204ENSMUST00000209711 495 ntTSL 3 BASIC16.18■□□□□ 0.18
Tnfrsf17O88472 Aldoa-ps3-201ENSMUST00000217558 306 ntBASIC16.18■□□□□ 0.18
Tnfrsf17O88472 Ndufb7-201ENSMUST00000036996 623 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Tnfrsf17O88472 Gm9925-201ENSMUST00000066583 483 ntAPPRIS P1 BASIC16.18■□□□□ 0.18
Tnfrsf17O88472 Crtc2-201ENSMUST00000029545 2747 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Tnfrsf17O88472 Mtmr1-202ENSMUST00000114601 4640 ntAPPRIS ALT2 TSL 5 BASIC16.18■□□□□ 0.18
Tnfrsf17O88472 Cyp4f15-204ENSMUST00000168171 2168 ntAPPRIS P3 TSL 1 (best) BASIC16.18■□□□□ 0.18
Tnfrsf17O88472 Pcf11-201ENSMUST00000119954 5995 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Tnfrsf17O88472 Fam105a-201ENSMUST00000100739 2867 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Tnfrsf17O88472 Trim25-202ENSMUST00000100627 1433 ntTSL 5 BASIC16.18■□□□□ 0.18
Tnfrsf17O88472 Tmem196-201ENSMUST00000058644 1678 ntAPPRIS P1 TSL 5 BASIC16.18■□□□□ 0.18
Tnfrsf17O88472 Ascl4-202ENSMUST00000170396 2016 ntAPPRIS P1 BASIC16.18■□□□□ 0.18
Tnfrsf17O88472 Uhmk1-202ENSMUST00000123399 7775 ntTSL 5 BASIC16.17■□□□□ 0.18
Tnfrsf17O88472 Ints6-201ENSMUST00000053959 4993 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Tnfrsf17O88472 Tead1-204ENSMUST00000106638 3047 ntAPPRIS ALT1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Tnfrsf17O88472 Asap2-202ENSMUST00000064595 5678 ntAPPRIS P4 TSL 5 BASIC16.17■□□□□ 0.18
Tnfrsf17O88472 A930001A20Rik-201ENSMUST00000182586 1366 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Tnfrsf17O88472 Urah-202ENSMUST00000106050 719 ntAPPRIS ALT2 TSL 2 BASIC16.17■□□□□ 0.18
Tnfrsf17O88472 Lamtor5-201ENSMUST00000145735 881 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Tnfrsf17O88472 Tsen15-205ENSMUST00000162371 431 ntTSL 5 BASIC16.17■□□□□ 0.18
Tnfrsf17O88472 Upp1-205ENSMUST00000164791 1252 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Retrieved 100 of 76,532 protein–RNA pairs in 19.7 ms