Protein–RNA interactions for Protein: O88427

Cacna1h, Voltage-dependent T-type calcium channel subunit alpha-1H, mousemouse

Predictions only

Length 2,365 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cacna1hO88427 AC159114.1-201ENSMUST00000220349 266 ntBASIC17.04■□□□□ 0.32
Cacna1hO88427 Rhebl1-201ENSMUST00000024518 1185 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Cacna1hO88427 Ank1-201ENSMUST00000033947 1030 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Cacna1hO88427 Npcd-202ENSMUST00000089299 1453 ntAPPRIS P4 TSL 1 (best) BASIC17.04■□□□□ 0.32
Cacna1hO88427 Emd-201ENSMUST00000002029 1595 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Cacna1hO88427 Cyp4f15-204ENSMUST00000168171 2168 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
Cacna1hO88427 BC037034-201ENSMUST00000048421 2490 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Cacna1hO88427 Ttc39c-201ENSMUST00000025294 2571 ntAPPRIS P2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Cacna1hO88427 Krt1-201ENSMUST00000023790 2445 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Cacna1hO88427 Whamm-201ENSMUST00000165460 3069 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Cacna1hO88427 Pisd-201ENSMUST00000061895 2183 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
Cacna1hO88427 Bcs1l-202ENSMUST00000113732 1679 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
Cacna1hO88427 Gm5414-201ENSMUST00000062879 1659 ntAPPRIS P1 TSL 2 BASIC17.04■□□□□ 0.32
Cacna1hO88427 AC164441.1-201ENSMUST00000221369 1004 ntTSL 5 BASIC17.04■□□□□ 0.32
Cacna1hO88427 1500035N22Rik-201ENSMUST00000075081 865 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Cacna1hO88427 Rnpep-201ENSMUST00000074357 2171 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Cacna1hO88427 Gm32996-201ENSMUST00000199828 1447 ntBASIC17.04■□□□□ 0.32
Cacna1hO88427 Cbx4-201ENSMUST00000026665 5179 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Cacna1hO88427 Mcmbp-202ENSMUST00000119081 2347 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Cacna1hO88427 Lmbr1l-201ENSMUST00000023736 2300 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Cacna1hO88427 Slc1a5-201ENSMUST00000108496 2764 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Cacna1hO88427 Dnajc2-202ENSMUST00000115192 1132 ntTSL 2 BASIC17.03■□□□□ 0.32
Cacna1hO88427 Mrpl36-202ENSMUST00000221730 717 ntAPPRIS P1 TSL 3 BASIC17.03■□□□□ 0.32
Cacna1hO88427 AC125350.1-201ENSMUST00000225115 903 ntBASIC17.03■□□□□ 0.32
Cacna1hO88427 Snrnp25-201ENSMUST00000039601 821 ntAPPRIS P2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Cacna1hO88427 Ercc6l2-202ENSMUST00000021926 1592 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Cacna1hO88427 Neto2-205ENSMUST00000216286 2932 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Cacna1hO88427 6430573P05Rik-203ENSMUST00000195547 2457 ntBASIC17.03■□□□□ 0.32
Cacna1hO88427 Kmt2b-201ENSMUST00000006470 8469 ntAPPRIS ALT2 TSL 5 BASIC17.03■□□□□ 0.32
Cacna1hO88427 Mamstr-201ENSMUST00000148532 1606 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Cacna1hO88427 Acp5-201ENSMUST00000069330 1356 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Cacna1hO88427 Gm19345-201ENSMUST00000172815 993 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Cacna1hO88427 Magohb-201ENSMUST00000032307 767 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Cacna1hO88427 Mcfd2-201ENSMUST00000024963 1823 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Cacna1hO88427 Tmbim1-201ENSMUST00000016309 2378 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Cacna1hO88427 Noc2l-202ENSMUST00000179886 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Cacna1hO88427 Rraga-201ENSMUST00000091064 1618 ntAPPRIS P1 BASIC17.03■□□□□ 0.32
Cacna1hO88427 Retreg2-201ENSMUST00000097694 2561 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
Cacna1hO88427 Iqck-201ENSMUST00000098087 1503 ntAPPRIS ALT2 TSL 5 BASIC17.02■□□□□ 0.32
Cacna1hO88427 Swsap1-201ENSMUST00000053583 1838 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Cacna1hO88427 Arl4a-201ENSMUST00000101472 1200 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Cacna1hO88427 Adprm-201ENSMUST00000116363 1283 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Cacna1hO88427 Ap2s1-204ENSMUST00000205607 372 ntTSL 3 BASIC17.02■□□□□ 0.32
Cacna1hO88427 Cldn22-201ENSMUST00000038693 995 ntAPPRIS P1 BASIC17.02■□□□□ 0.32
Cacna1hO88427 Psmb4-201ENSMUST00000005923 1183 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Cacna1hO88427 Commd5-201ENSMUST00000068407 1037 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Cacna1hO88427 Sirt1-201ENSMUST00000020257 3905 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.32
Cacna1hO88427 Gm45144-201ENSMUST00000207473 354 ntTSL 5 BASIC17.02■□□□□ 0.31
Cacna1hO88427 Plin1-202ENSMUST00000178257 1841 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Cacna1hO88427 Dcbld2-201ENSMUST00000046663 6561 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Cacna1hO88427 Pkd2-201ENSMUST00000086831 5219 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Cacna1hO88427 Ghrhr-201ENSMUST00000063578 1550 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Cacna1hO88427 Gm13830-205ENSMUST00000201195 1155 ntBASIC17.01■□□□□ 0.31
Cacna1hO88427 Rogdi-202ENSMUST00000090453 652 ntTSL 5 BASIC17.01■□□□□ 0.31
Cacna1hO88427 Ltbp3-201ENSMUST00000081496 5190 ntAPPRIS P1 TSL 5 BASIC17.01■□□□□ 0.31
Cacna1hO88427 Elp6-205ENSMUST00000199592 1304 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Cacna1hO88427 Hpcal1-201ENSMUST00000071858 1526 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Cacna1hO88427 Tekt1-201ENSMUST00000021155 1447 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Cacna1hO88427 Gpr162-201ENSMUST00000046893 2676 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Cacna1hO88427 B3gat2-203ENSMUST00000144602 1488 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Cacna1hO88427 Pou3f1-201ENSMUST00000053491 3849 ntAPPRIS P1 BASIC17.01■□□□□ 0.31
Cacna1hO88427 Lce1l-201ENSMUST00000054426 670 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Cacna1hO88427 A830031A19Rik-201ENSMUST00000068360 757 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Cacna1hO88427 A130006I12Rik-201ENSMUST00000091396 408 ntBASIC17.01■□□□□ 0.31
Cacna1hO88427 Rhog-201ENSMUST00000098230 1269 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Cacna1hO88427 Kcnj12-202ENSMUST00000089184 2291 ntAPPRIS P3 TSL 1 (best) BASIC17.01■□□□□ 0.31
Cacna1hO88427 Aanat-205ENSMUST00000153476 1353 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Cacna1hO88427 Zdhhc5-201ENSMUST00000035840 4706 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Cacna1hO88427 Nisch-201ENSMUST00000022469 5559 ntAPPRIS P3 TSL 2 BASIC17■□□□□ 0.31
Cacna1hO88427 Erich2-201ENSMUST00000100041 1749 ntAPPRIS P2 TSL 1 (best) BASIC17■□□□□ 0.31
Cacna1hO88427 Mpig6b-201ENSMUST00000097337 2252 ntTSL 1 (best) BASIC17■□□□□ 0.31
Cacna1hO88427 Zfyve21-204ENSMUST00000221375 1265 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
Cacna1hO88427 Gm6296-201ENSMUST00000222599 943 ntBASIC17■□□□□ 0.31
Cacna1hO88427 Wdyhv1-204ENSMUST00000226955 1094 ntBASIC17■□□□□ 0.31
Cacna1hO88427 4930505A04Rik-201ENSMUST00000041763 904 ntAPPRIS P1 TSL 2 BASIC17■□□□□ 0.31
Cacna1hO88427 Ndufb10-201ENSMUST00000045602 732 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Cacna1hO88427 Sft2d3-201ENSMUST00000054984 2810 ntAPPRIS P1 BASIC17■□□□□ 0.31
Cacna1hO88427 H2-DMb1-201ENSMUST00000114232 1404 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Cacna1hO88427 Sh3glb1-205ENSMUST00000199854 1416 ntTSL 5 BASIC17■□□□□ 0.31
Cacna1hO88427 4933433G15Rik-201ENSMUST00000180533 1481 ntTSL 1 (best) BASIC17■□□□□ 0.31
Cacna1hO88427 Fcgrt-201ENSMUST00000003512 1770 ntAPPRIS P2 TSL 1 (best) BASIC17■□□□□ 0.31
Cacna1hO88427 Magi2-203ENSMUST00000115267 4478 ntTSL 1 (best) BASIC17■□□□□ 0.31
Cacna1hO88427 Bsg-202ENSMUST00000105381 1240 ntTSL 1 (best) BASIC17■□□□□ 0.31
Cacna1hO88427 Sox2ot-202ENSMUST00000196058 753 ntTSL 3 BASIC17■□□□□ 0.31
Cacna1hO88427 Fam26f-201ENSMUST00000062784 1094 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Cacna1hO88427 Cdkn2d-201ENSMUST00000086374 1264 ntTSL 1 (best) BASIC17■□□□□ 0.31
Cacna1hO88427 Fgfr3-202ENSMUST00000087820 2630 ntAPPRIS ALT2 TSL 5 BASIC17■□□□□ 0.31
Cacna1hO88427 Eif6-202ENSMUST00000109638 1382 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Cacna1hO88427 Tle4-202ENSMUST00000167776 4545 ntAPPRIS ALT1 TSL 5 BASIC16.99■□□□□ 0.31
Cacna1hO88427 Vps72-201ENSMUST00000009102 1456 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Cacna1hO88427 Gm37280-201ENSMUST00000194583 375 ntTSL 3 BASIC16.99■□□□□ 0.31
Cacna1hO88427 Ndufb6-201ENSMUST00000095128 659 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Cacna1hO88427 Ptgis-202ENSMUST00000088041 1711 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Cacna1hO88427 Eif5a-207ENSMUST00000108610 1409 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Cacna1hO88427 Isyna1-204ENSMUST00000210005 1914 ntAPPRIS P1 TSL 5 BASIC16.99■□□□□ 0.31
Cacna1hO88427 Runx2-210ENSMUST00000162373 1565 ntAPPRIS ALT2 TSL 5 BASIC16.99■□□□□ 0.31
Cacna1hO88427 Zbtb7c-202ENSMUST00000167921 2147 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Cacna1hO88427 Sigmar1-201ENSMUST00000059354 1640 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Cacna1hO88427 Rncr4-201ENSMUST00000194541 2234 ntBASIC16.99■□□□□ 0.31
Cacna1hO88427 Naa30-205ENSMUST00000153488 4446 ntAPPRIS P2 TSL 1 (best) BASIC16.99■□□□□ 0.31
Retrieved 100 of 76,532 protein–RNA pairs in 41.3 ms