Protein–RNA interactions for Protein: O88393

Tgfbr3, Transforming growth factor beta receptor type 3, mousemouse

Predictions only

Length 850 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tgfbr3O88393 Rapgef3os1-201ENSMUST00000149373 483 ntTSL 3 BASIC16.6■□□□□ 0.25
Tgfbr3O88393 Ppdpf-201ENSMUST00000016488 1160 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Tgfbr3O88393 Gm2431-201ENSMUST00000171531 519 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
Tgfbr3O88393 Flt3l-206ENSMUST00000210197 834 ntAPPRIS ALT2 TSL 5 BASIC16.6■□□□□ 0.25
Tgfbr3O88393 Gm17949-201ENSMUST00000210548 1179 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
Tgfbr3O88393 Gmnn-201ENSMUST00000006898 1127 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Tgfbr3O88393 Hes6-201ENSMUST00000086851 1335 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Tgfbr3O88393 Clk3-201ENSMUST00000065330 2496 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Tgfbr3O88393 Rpp25-201ENSMUST00000080514 1423 ntAPPRIS P1 BASIC16.6■□□□□ 0.25
Tgfbr3O88393 E2f1-202ENSMUST00000103145 2732 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
Tgfbr3O88393 Zc3h15-201ENSMUST00000081591 2111 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Tgfbr3O88393 Krt19-201ENSMUST00000007317 1576 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Tgfbr3O88393 Stx2-201ENSMUST00000031378 2939 ntAPPRIS P3 TSL 1 (best) BASIC16.59■□□□□ 0.25
Tgfbr3O88393 Fam129b-201ENSMUST00000028135 3714 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Tgfbr3O88393 Lrrfip1-201ENSMUST00000068116 2050 ntAPPRIS ALT2 TSL 5 BASIC16.59■□□□□ 0.25
Tgfbr3O88393 Srgn-205ENSMUST00000162161 694 ntAPPRIS P1 TSL 3 BASIC16.59■□□□□ 0.25
Tgfbr3O88393 4930505N22Rik-201ENSMUST00000181820 945 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Tgfbr3O88393 Klf13-202ENSMUST00000183817 599 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Tgfbr3O88393 Manbal-201ENSMUST00000081202 1107 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Tgfbr3O88393 C530025M09Rik-201ENSMUST00000099264 690 ntAPPRIS P1 BASIC16.59■□□□□ 0.25
Tgfbr3O88393 Phf14-201ENSMUST00000090632 3985 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Tgfbr3O88393 Tmem185a-201ENSMUST00000101506 2429 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Tgfbr3O88393 Foxf1-201ENSMUST00000181504 2415 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Tgfbr3O88393 Cep57-209ENSMUST00000148086 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
Tgfbr3O88393 Rsu1-201ENSMUST00000028059 1546 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Tgfbr3O88393 Ndufv3-201ENSMUST00000046288 1537 ntAPPRIS P4 TSL 1 (best) BASIC16.59■□□□□ 0.25
Tgfbr3O88393 Hmgxb3-201ENSMUST00000091884 5101 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Tgfbr3O88393 Trim58-201ENSMUST00000075084 2192 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
Tgfbr3O88393 9030624G23Rik-201ENSMUST00000101538 2245 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
Tgfbr3O88393 Gm11532-201ENSMUST00000128111 5272 ntTSL 1 (best) BASIC16.58■□□□□ 0.25
Tgfbr3O88393 Mmp11-201ENSMUST00000000924 2288 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
Tgfbr3O88393 Hoxb3os-201ENSMUST00000131275 2315 ntTSL 3 BASIC16.58■□□□□ 0.25
Tgfbr3O88393 Spata2l-201ENSMUST00000098327 2380 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
Tgfbr3O88393 Lancl2-201ENSMUST00000050077 2509 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
Tgfbr3O88393 Paxip1-201ENSMUST00000002291 5850 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Tgfbr3O88393 Ppp1r2-202ENSMUST00000115233 958 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
Tgfbr3O88393 Gm3272-201ENSMUST00000181181 1229 ntBASIC16.58■□□□□ 0.24
Tgfbr3O88393 Snhg10-202ENSMUST00000222812 527 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
Tgfbr3O88393 Ndufb8-201ENSMUST00000026222 680 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Tgfbr3O88393 Gm10566-201ENSMUST00000086739 996 ntBASIC16.58■□□□□ 0.24
Tgfbr3O88393 Gm7008-201ENSMUST00000038121 1366 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
Tgfbr3O88393 Hspbp1-201ENSMUST00000079970 1593 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Tgfbr3O88393 Nudt16-201ENSMUST00000035179 1631 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Tgfbr3O88393 C630004M23Rik-201ENSMUST00000194765 1682 ntBASIC16.58■□□□□ 0.24
Tgfbr3O88393 Htra3-202ENSMUST00000114233 1901 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
Tgfbr3O88393 Lsm6-201ENSMUST00000051867 2107 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Tgfbr3O88393 Wnt10a-201ENSMUST00000006718 2468 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Tgfbr3O88393 Chd5-202ENSMUST00000030775 9486 ntAPPRIS P3 TSL 5 BASIC16.58■□□□□ 0.24
Tgfbr3O88393 Cacul1-203ENSMUST00000166712 5700 ntAPPRIS ALT2 TSL 5 BASIC16.58■□□□□ 0.24
Tgfbr3O88393 Gas2-203ENSMUST00000107591 2232 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Tgfbr3O88393 Gm43213-201ENSMUST00000151866 1790 ntBASIC16.57■□□□□ 0.24
Tgfbr3O88393 Carmn-201ENSMUST00000181155 1778 ntTSL 2 BASIC16.57■□□□□ 0.24
Tgfbr3O88393 Tha1-201ENSMUST00000033230 1770 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Tgfbr3O88393 Sept4-205ENSMUST00000107962 1678 ntAPPRIS ALT1 TSL 5 BASIC16.57■□□□□ 0.24
Tgfbr3O88393 Adgrl1-207ENSMUST00000141158 8181 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Tgfbr3O88393 Pmpcb-201ENSMUST00000030882 1615 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Tgfbr3O88393 Hoxa10-201ENSMUST00000121043 1436 ntAPPRIS P1 TSL 2 BASIC16.57■□□□□ 0.24
Tgfbr3O88393 Fam181a-203ENSMUST00000191218 1419 ntAPPRIS P1 TSL 5 BASIC16.57■□□□□ 0.24
Tgfbr3O88393 Gm44924-201ENSMUST00000138087 421 ntTSL 3 BASIC16.57■□□□□ 0.24
Tgfbr3O88393 Gm15545-203ENSMUST00000150613 1059 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Tgfbr3O88393 Gfod2-203ENSMUST00000155038 951 ntTSL 2 BASIC16.57■□□□□ 0.24
Tgfbr3O88393 Gm26039-201ENSMUST00000158152 144 ntBASIC16.57■□□□□ 0.24
Tgfbr3O88393 Utp23-204ENSMUST00000161651 582 ntTSL 5 BASIC16.57■□□□□ 0.24
Tgfbr3O88393 Gm26620-201ENSMUST00000180542 817 ntAPPRIS P1 BASIC16.57■□□□□ 0.24
Tgfbr3O88393 Ephx4-201ENSMUST00000049146 1279 ntAPPRIS P1 TSL 2 BASIC16.57■□□□□ 0.24
Tgfbr3O88393 Tmem123-201ENSMUST00000052865 2907 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Tgfbr3O88393 Cxadr-201ENSMUST00000023572 5734 ntAPPRIS P3 TSL 1 (best) BASIC16.57■□□□□ 0.24
Tgfbr3O88393 Ankrd40-203ENSMUST00000107818 3487 ntAPPRIS P3 TSL 5 BASIC16.57■□□□□ 0.24
Tgfbr3O88393 2810474O19Rik-201ENSMUST00000046689 6066 ntAPPRIS P2 TSL 1 (best) BASIC16.57■□□□□ 0.24
Tgfbr3O88393 Clint1-201ENSMUST00000109260 3311 ntAPPRIS P3 TSL 1 (best) BASIC16.57■□□□□ 0.24
Tgfbr3O88393 Fam126a-202ENSMUST00000101513 1679 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Tgfbr3O88393 Ahcyl1-201ENSMUST00000029490 3863 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Tgfbr3O88393 Usf2-201ENSMUST00000058860 2419 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Tgfbr3O88393 A530010L16Rik-201ENSMUST00000212007 2336 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Tgfbr3O88393 Cops8-201ENSMUST00000036153 2287 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Tgfbr3O88393 Gm15645-201ENSMUST00000131504 2208 ntTSL 5 BASIC16.56■□□□□ 0.24
Tgfbr3O88393 Lrch2-201ENSMUST00000112819 4892 ntAPPRIS P1 TSL 5 BASIC16.56■□□□□ 0.24
Tgfbr3O88393 Tfpt-202ENSMUST00000108641 1166 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
Tgfbr3O88393 9130019P16Rik-201ENSMUST00000135612 1019 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Tgfbr3O88393 Gm28876-201ENSMUST00000188137 703 ntTSL 3 BASIC16.56■□□□□ 0.24
Tgfbr3O88393 Gzmm-201ENSMUST00000020549 1287 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Tgfbr3O88393 Krt10-202ENSMUST00000211768 557 ntTSL 3 BASIC16.56■□□□□ 0.24
Tgfbr3O88393 S100a16-202ENSMUST00000098911 1127 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Tgfbr3O88393 Atp8b2-202ENSMUST00000107396 5705 ntAPPRIS ALT2 TSL 5 BASIC16.56■□□□□ 0.24
Tgfbr3O88393 Fbxo30-201ENSMUST00000070300 2492 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Tgfbr3O88393 Mark2-206ENSMUST00000164205 3104 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
Tgfbr3O88393 Ppp1r3g-203ENSMUST00000225537 2389 ntAPPRIS P1 BASIC16.56■□□□□ 0.24
Tgfbr3O88393 Nrxn2-204ENSMUST00000113461 5505 ntAPPRIS ALT2 TSL 5 BASIC16.56■□□□□ 0.24
Tgfbr3O88393 Hmgb3-202ENSMUST00000072699 1571 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Tgfbr3O88393 Ehmt2-201ENSMUST00000013931 4026 ntAPPRIS P4 TSL 1 (best) BASIC16.55■□□□□ 0.24
Tgfbr3O88393 4930447C04Rik-201ENSMUST00000044000 2051 ntAPPRIS P2 TSL 1 (best) BASIC16.55■□□□□ 0.24
Tgfbr3O88393 Bnip2-203ENSMUST00000117450 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
Tgfbr3O88393 Klhdc1-201ENSMUST00000063445 2620 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Tgfbr3O88393 Trim25-202ENSMUST00000100627 1433 ntTSL 5 BASIC16.55■□□□□ 0.24
Tgfbr3O88393 Rhbdf1-201ENSMUST00000020524 2946 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Tgfbr3O88393 Tnpo2-207ENSMUST00000211601 2941 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Tgfbr3O88393 AW011738-201ENSMUST00000105140 1848 ntAPPRIS P1 BASIC16.55■□□□□ 0.24
Tgfbr3O88393 Fmnl2-201ENSMUST00000049483 5461 ntTSL 5 BASIC16.55■□□□□ 0.24
Tgfbr3O88393 Rps6ka2-201ENSMUST00000024575 5404 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Tgfbr3O88393 C030037D09Rik-202ENSMUST00000136201 1216 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Retrieved 100 of 76,532 protein–RNA pairs in 37.5 ms