Protein–RNA interactions for Protein: O88384

Vti1b, Vesicle transport through interaction with t-SNAREs homolog 1B, mousemouse

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vti1bO88384 Acp4-203ENSMUST00000118216 1454 ntAPPRIS P1 TSL 5 BASIC16.68■□□□□ 0.26
Vti1bO88384 Proser2-201ENSMUST00000054254 2061 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Vti1bO88384 3110043O21Rik-203ENSMUST00000108127 3193 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Vti1bO88384 Lzts2-201ENSMUST00000039016 2825 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Vti1bO88384 Porcn-202ENSMUST00000082320 1883 ntAPPRIS ALT1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Vti1bO88384 Sarnp-201ENSMUST00000105230 918 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Vti1bO88384 Gm26524-201ENSMUST00000192339 390 ntBASIC16.68■□□□□ 0.26
Vti1bO88384 Gm3807-201ENSMUST00000193520 1168 ntBASIC16.68■□□□□ 0.26
Vti1bO88384 Nat8-201ENSMUST00000032073 1123 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Vti1bO88384 Pgm3-202ENSMUST00000072585 1920 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Vti1bO88384 Fbxo33-201ENSMUST00000043204 3688 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Vti1bO88384 Nsg1-201ENSMUST00000031009 2581 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Vti1bO88384 Puf60-201ENSMUST00000002599 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
Vti1bO88384 Ripor2-205ENSMUST00000110384 5608 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
Vti1bO88384 Zrsr2-202ENSMUST00000112289 2735 ntAPPRIS P1 TSL 2 BASIC16.68■□□□□ 0.26
Vti1bO88384 Mipol1-201ENSMUST00000123498 2117 ntAPPRIS ALT2 TSL 5 BASIC16.67■□□□□ 0.26
Vti1bO88384 Dlgap4-212ENSMUST00000169464 4851 ntTSL 5 BASIC16.67■□□□□ 0.26
Vti1bO88384 Myb-201ENSMUST00000020158 3074 ntAPPRIS P3 TSL 1 (best) BASIC16.67■□□□□ 0.26
Vti1bO88384 Gabarap-201ENSMUST00000018711 1351 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Vti1bO88384 Anapc16-201ENSMUST00000020307 1379 ntTSL 2 BASIC16.67■□□□□ 0.26
Vti1bO88384 Ppp1r8-202ENSMUST00000105919 1090 ntAPPRIS ALT1 TSL 3 BASIC16.67■□□□□ 0.26
Vti1bO88384 4930467K11Rik-201ENSMUST00000180831 723 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Vti1bO88384 Hspe1-201ENSMUST00000075242 774 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Vti1bO88384 Rrbp1-201ENSMUST00000016072 5177 ntAPPRIS P4 TSL 5 BASIC16.67■□□□□ 0.26
Vti1bO88384 Ptprj-204ENSMUST00000168621 7634 ntAPPRIS P4 TSL 1 (best) BASIC16.67■□□□□ 0.26
Vti1bO88384 Smad3-201ENSMUST00000034973 5090 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Vti1bO88384 Cdc14b-203ENSMUST00000109770 3052 ntAPPRIS P3 TSL 1 (best) BASIC16.67■□□□□ 0.26
Vti1bO88384 4930503L19Rik-201ENSMUST00000067556 2291 ntAPPRIS P2 TSL 1 (best) BASIC16.67■□□□□ 0.26
Vti1bO88384 Cyr61-201ENSMUST00000029846 2019 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Vti1bO88384 Mff-208ENSMUST00000160786 1645 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Vti1bO88384 Inppl1-201ENSMUST00000035836 4995 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Vti1bO88384 Gm6209-202ENSMUST00000194629 1506 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Vti1bO88384 Tpd52-205ENSMUST00000120143 6317 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Vti1bO88384 Synpo-206ENSMUST00000130360 5159 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Vti1bO88384 Tsks-201ENSMUST00000080233 1806 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
Vti1bO88384 Cep57-208ENSMUST00000147115 2262 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Vti1bO88384 Cep68-204ENSMUST00000162811 2788 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Vti1bO88384 A530084C06Rik-201ENSMUST00000170573 3200 ntAPPRIS P1 BASIC16.66■□□□□ 0.26
Vti1bO88384 Schip1-203ENSMUST00000170788 1730 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Vti1bO88384 Gm29458-201ENSMUST00000187093 354 ntTSL 3 BASIC16.66■□□□□ 0.26
Vti1bO88384 Timp4-202ENSMUST00000205131 945 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Vti1bO88384 Tgds-204ENSMUST00000228543 1594 ntBASIC16.66■□□□□ 0.26
Vti1bO88384 Arrb2-202ENSMUST00000084954 1732 ntTSL 5 BASIC16.66■□□□□ 0.26
Vti1bO88384 Slc27a4-201ENSMUST00000080065 4054 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Vti1bO88384 Phtf1-203ENSMUST00000090685 3006 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Vti1bO88384 Urgcp-206ENSMUST00000170116 5528 ntAPPRIS ALT2 TSL 5 BASIC16.66■□□□□ 0.26
Vti1bO88384 Map4k5-201ENSMUST00000049239 4452 ntAPPRIS ALT1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Vti1bO88384 Tacc1-201ENSMUST00000084030 7788 ntAPPRIS P4 TSL 1 (best) BASIC16.66■□□□□ 0.26
Vti1bO88384 Shank1-203ENSMUST00000107938 9826 ntAPPRIS P2 TSL 5 BASIC16.66■□□□□ 0.26
Vti1bO88384 Simc1-202ENSMUST00000121401 4819 ntAPPRIS P2 TSL 5 BASIC16.66■□□□□ 0.26
Vti1bO88384 Foxq1-201ENSMUST00000042118 4843 ntAPPRIS P1 BASIC16.66■□□□□ 0.26
Vti1bO88384 Thsd7a-202ENSMUST00000119581 5678 ntAPPRIS P2 TSL 5 BASIC16.65■□□□□ 0.26
Vti1bO88384 Acy3-201ENSMUST00000054030 1505 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Vti1bO88384 Podxl2-202ENSMUST00000061262 2195 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
Vti1bO88384 Tle3-211ENSMUST00000161689 2836 ntTSL 2 BASIC16.65■□□□□ 0.26
Vti1bO88384 Cadm3-201ENSMUST00000005470 2518 ntTSL 5 BASIC16.65■□□□□ 0.26
Vti1bO88384 Mdfic-202ENSMUST00000120512 1871 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Vti1bO88384 B3gat2-202ENSMUST00000140583 1737 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Vti1bO88384 Ryr2-203ENSMUST00000220597 4924 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Vti1bO88384 Gm26674-201ENSMUST00000180770 1446 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Vti1bO88384 Rtn4-204ENSMUST00000102842 2257 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Vti1bO88384 2900042K21Rik-201ENSMUST00000194444 653 ntBASIC16.65■□□□□ 0.26
Vti1bO88384 Gm5408-201ENSMUST00000197998 747 ntBASIC16.65■□□□□ 0.26
Vti1bO88384 Gm44210-201ENSMUST00000205253 713 ntTSL 3 BASIC16.65■□□□□ 0.26
Vti1bO88384 Rab3c-203ENSMUST00000224180 967 ntBASIC16.65■□□□□ 0.26
Vti1bO88384 Gng5-201ENSMUST00000090031 593 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Vti1bO88384 Noxa1-201ENSMUST00000044018 1617 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
Vti1bO88384 Stac2-201ENSMUST00000017544 3050 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Vti1bO88384 Rab11fip4-201ENSMUST00000017783 7156 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Vti1bO88384 Gm43338-201ENSMUST00000198617 2223 ntBASIC16.65■□□□□ 0.26
Vti1bO88384 Cyp2u1-203ENSMUST00000200236 1716 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Vti1bO88384 Gpr137-201ENSMUST00000025909 1717 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Vti1bO88384 Zfp800-203ENSMUST00000115321 2699 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.26
Vti1bO88384 BC051019-202ENSMUST00000106735 1957 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Vti1bO88384 Vps37a-201ENSMUST00000098817 6379 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Vti1bO88384 Slc7a5-201ENSMUST00000045557 3517 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Vti1bO88384 Anks1b-225ENSMUST00000182966 1625 ntTSL 5 BASIC16.64■□□□□ 0.25
Vti1bO88384 Abhd10-201ENSMUST00000066983 2848 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Vti1bO88384 Gm40460-201ENSMUST00000211591 735 ntAPPRIS P1 BASIC16.64■□□□□ 0.25
Vti1bO88384 6230400D17Rik-202ENSMUST00000224976 1019 ntBASIC16.64■□□□□ 0.25
Vti1bO88384 Dnajb2-201ENSMUST00000055223 1199 ntTSL 5 BASIC16.64■□□□□ 0.25
Vti1bO88384 Zfp580-201ENSMUST00000069324 1096 ntAPPRIS P2 TSL 1 (best) BASIC16.64■□□□□ 0.25
Vti1bO88384 Ubald1-201ENSMUST00000037843 1851 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Vti1bO88384 Vsig10-201ENSMUST00000086464 2052 ntAPPRIS ALT2 TSL 5 BASIC16.64■□□□□ 0.25
Vti1bO88384 Frmd5-203ENSMUST00000121219 2262 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Vti1bO88384 Zdhhc6-201ENSMUST00000076891 2263 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Vti1bO88384 Casp9-201ENSMUST00000030747 3897 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Vti1bO88384 Fiz1-208ENSMUST00000208944 2306 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Vti1bO88384 Ino80e-201ENSMUST00000050833 1944 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Vti1bO88384 Matk-202ENSMUST00000117488 1980 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
Vti1bO88384 Gne-202ENSMUST00000102936 2920 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Vti1bO88384 Gm43859-201ENSMUST00000200075 1412 ntBASIC16.63■□□□□ 0.25
Vti1bO88384 Gm7292-201ENSMUST00000194706 2527 ntBASIC16.63■□□□□ 0.25
Vti1bO88384 Nfe2l1-202ENSMUST00000107657 3869 ntAPPRIS P3 TSL 5 BASIC16.63■□□□□ 0.25
Vti1bO88384 Dnaaf5-203ENSMUST00000196441 2426 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Vti1bO88384 5730522E02Rik-201ENSMUST00000109511 1162 ntAPPRIS P5 TSL 1 (best) BASIC16.63■□□□□ 0.25
Vti1bO88384 Tpsg1-204ENSMUST00000160920 867 ntTSL 3 BASIC16.63■□□□□ 0.25
Vti1bO88384 A230065N10Rik-201ENSMUST00000172178 1028 ntBASIC16.63■□□□□ 0.25
Vti1bO88384 1700067K01Rik-203ENSMUST00000172548 986 ntAPPRIS P2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Vti1bO88384 Ube2i-213ENSMUST00000174031 824 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Retrieved 100 of 76,532 protein–RNA pairs in 35.7 ms