Protein–RNA interactions for Protein: O70404

Vamp8, Vesicle-associated membrane protein 8, mousemouse

Predictions only

Length 101 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vamp8O70404 4833418N17Rik-201ENSMUST00000064826 615 ntBASIC12.36□□□□□ -0.43
Vamp8O70404 Bend5-201ENSMUST00000030274 1826 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Vamp8O70404 Eepd1-201ENSMUST00000040677 2723 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Vamp8O70404 Tpm2-202ENSMUST00000107913 2098 ntAPPRIS P3 TSL 1 (best) BASIC12.36□□□□□ -0.43
Vamp8O70404 5031425F14Rik-201ENSMUST00000127920 2098 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Vamp8O70404 Gm10516-201ENSMUST00000180598 2615 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Vamp8O70404 Fbxl21-203ENSMUST00000121871 1963 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Vamp8O70404 Egln2-202ENSMUST00000108382 1756 ntAPPRIS P1 TSL 5 BASIC12.35□□□□□ -0.43
Vamp8O70404 Acaa1a-201ENSMUST00000039784 1762 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Vamp8O70404 Ttc39a-201ENSMUST00000064129 2356 ntAPPRIS P3 TSL 1 (best) BASIC12.35□□□□□ -0.43
Vamp8O70404 Megf9-202ENSMUST00000107359 7924 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Vamp8O70404 Gm13001-201ENSMUST00000154285 774 ntTSL 2 BASIC12.35□□□□□ -0.43
Vamp8O70404 Rab23-201ENSMUST00000088287 4322 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Vamp8O70404 Arhgef18-201ENSMUST00000004684 5271 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Vamp8O70404 Sp8-201ENSMUST00000063918 4478 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Vamp8O70404 Asic2-201ENSMUST00000021045 3436 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Vamp8O70404 Lin7a-203ENSMUST00000218031 1769 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Vamp8O70404 Tsc2-217ENSMUST00000227745 5598 ntAPPRIS ALT2 BASIC12.35□□□□□ -0.43
Vamp8O70404 Dleu2-208ENSMUST00000182768 1442 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Vamp8O70404 Tcta-201ENSMUST00000044725 1668 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Vamp8O70404 Zscan29-203ENSMUST00000146243 2894 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Vamp8O70404 Fdxr-201ENSMUST00000021078 1948 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Vamp8O70404 Arpc5l-202ENSMUST00000112862 1339 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Vamp8O70404 Fbxo9-202ENSMUST00000085311 2155 ntAPPRIS ALT1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Vamp8O70404 Arhgap11a-204ENSMUST00000110949 4458 ntAPPRIS P2 TSL 5 BASIC12.35□□□□□ -0.43
Vamp8O70404 Parg-204ENSMUST00000164137 3013 ntTSL 5 BASIC12.35□□□□□ -0.43
Vamp8O70404 Fbxo31-201ENSMUST00000059018 4358 ntAPPRIS P2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Vamp8O70404 Ube2d-ps-204ENSMUST00000137510 1846 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Vamp8O70404 Msl2-201ENSMUST00000085177 4889 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Vamp8O70404 Taf10-203ENSMUST00000141116 4281 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Vamp8O70404 Tmem55b-209ENSMUST00000162957 1465 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Vamp8O70404 Stac2-201ENSMUST00000017544 3050 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Vamp8O70404 Pitpnm1-201ENSMUST00000049658 4206 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Vamp8O70404 Zcchc17-202ENSMUST00000134159 2113 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Vamp8O70404 Zdhhc2-201ENSMUST00000049389 3381 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Vamp8O70404 Epm2a-201ENSMUST00000069106 3287 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Vamp8O70404 Prkab1-202ENSMUST00000111999 2026 ntAPPRIS P1 TSL 2 BASIC12.34□□□□□ -0.43
Vamp8O70404 Mid1ip1-201ENSMUST00000008179 2019 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Vamp8O70404 Rundc3b-201ENSMUST00000047485 3677 ntAPPRIS P3 TSL 1 (best) BASIC12.34□□□□□ -0.43
Vamp8O70404 Papd5-202ENSMUST00000118952 4597 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Vamp8O70404 Rnf150-201ENSMUST00000078525 9682 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Vamp8O70404 Dynll1-202ENSMUST00000112090 729 ntAPPRIS P1 TSL 2 BASIC12.34□□□□□ -0.43
Vamp8O70404 Hrh3-203ENSMUST00000164442 1242 ntAPPRIS ALT2 TSL 5 BASIC12.34□□□□□ -0.43
Vamp8O70404 Serp2-204ENSMUST00000228055 705 ntBASIC12.34□□□□□ -0.43
Vamp8O70404 Naa20-201ENSMUST00000002805 1172 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Vamp8O70404 Stk19-201ENSMUST00000077477 1120 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Vamp8O70404 Slc35f4-201ENSMUST00000074368 1931 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Vamp8O70404 Macrod2-202ENSMUST00000078027 1669 ntAPPRIS P2 TSL 5 BASIC12.34□□□□□ -0.43
Vamp8O70404 Nsmf-203ENSMUST00000100334 2957 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Vamp8O70404 Dxo-211ENSMUST00000180043 1447 ntAPPRIS P1 TSL 5 BASIC12.34□□□□□ -0.43
Vamp8O70404 Cd37-209ENSMUST00000211373 1428 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Vamp8O70404 Isyna1-201ENSMUST00000019283 1836 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Vamp8O70404 Gnas-202ENSMUST00000087871 3903 ntAPPRIS P4 TSL 1 (best) BASIC12.34□□□□□ -0.43
Vamp8O70404 Fem1a-201ENSMUST00000060253 6816 ntAPPRIS P1 BASIC12.34□□□□□ -0.43
Vamp8O70404 Kdm6b-201ENSMUST00000094077 6654 ntAPPRIS P1 TSL 5 BASIC12.34□□□□□ -0.43
Vamp8O70404 Zmynd11-207ENSMUST00000110638 4003 ntTSL 5 BASIC12.34□□□□□ -0.43
Vamp8O70404 Tpcn1-201ENSMUST00000046426 4712 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.43
Vamp8O70404 Serbp1-203ENSMUST00000203077 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC12.33□□□□□ -0.43
Vamp8O70404 Pdx1-201ENSMUST00000085591 2158 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Vamp8O70404 Sh3yl1-201ENSMUST00000020997 1750 ntAPPRIS P3 TSL 1 (best) BASIC12.33□□□□□ -0.44
Vamp8O70404 Mmp28-201ENSMUST00000021020 2311 ntAPPRIS P4 TSL 1 (best) BASIC12.33□□□□□ -0.44
Vamp8O70404 D830036C21Rik-202ENSMUST00000208263 1548 ntBASIC12.33□□□□□ -0.44
Vamp8O70404 Dhh-201ENSMUST00000023737 2363 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Vamp8O70404 Gm37374-201ENSMUST00000194954 1829 ntBASIC12.33□□□□□ -0.44
Vamp8O70404 Zbtb11-201ENSMUST00000050248 4920 ntAPPRIS P1 TSL 5 BASIC12.33□□□□□ -0.44
Vamp8O70404 Shq1-204ENSMUST00000170667 1990 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Vamp8O70404 Magi1-208ENSMUST00000204347 7929 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Vamp8O70404 Tex261-201ENSMUST00000014892 2984 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Vamp8O70404 Gm20109-201ENSMUST00000180802 671 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Vamp8O70404 Dmgdh-201ENSMUST00000048001 2992 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Vamp8O70404 Bex1-201ENSMUST00000058125 866 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Vamp8O70404 Pbx1-201ENSMUST00000064438 1020 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Vamp8O70404 Cib1-201ENSMUST00000065163 1047 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Vamp8O70404 4930527J03Rik-201ENSMUST00000094270 543 ntBASIC12.33□□□□□ -0.44
Vamp8O70404 I0C0044D17Rik-201ENSMUST00000097964 2264 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Vamp8O70404 Msmo1-201ENSMUST00000034015 2044 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Vamp8O70404 Ccnl1-201ENSMUST00000029416 2169 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Vamp8O70404 Slc35d2-201ENSMUST00000099441 2303 ntAPPRIS P2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Vamp8O70404 Inpp5e-202ENSMUST00000114090 2790 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Vamp8O70404 Phf7-201ENSMUST00000022459 2084 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Vamp8O70404 Ddn-201ENSMUST00000075444 3740 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Vamp8O70404 Tor1aip2-205ENSMUST00000111757 6118 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Vamp8O70404 Hnrnpul1-205ENSMUST00000206832 3784 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Vamp8O70404 Prkcb-201ENSMUST00000064921 2557 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Vamp8O70404 Dpm1-209ENSMUST00000154111 2293 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Vamp8O70404 Ing1-202ENSMUST00000209565 1971 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Vamp8O70404 Ralgapa2-211ENSMUST00000228797 8245 ntAPPRIS ALT2 BASIC12.32□□□□□ -0.44
Vamp8O70404 Vhl-201ENSMUST00000035673 2792 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Vamp8O70404 Anks3-201ENSMUST00000023157 2483 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Vamp8O70404 Gm27029-201ENSMUST00000107257 1898 ntAPPRIS ALT2 TSL 5 BASIC12.32□□□□□ -0.44
Vamp8O70404 Rabgap1l-216ENSMUST00000195442 1877 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Vamp8O70404 Kcnab3-201ENSMUST00000018614 2538 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Vamp8O70404 1700003F12Rik-202ENSMUST00000109709 704 ntAPPRIS ALT2 TSL 3 BASIC12.32□□□□□ -0.44
Vamp8O70404 1700003F12Rik-201ENSMUST00000045116 704 ntAPPRIS P2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Vamp8O70404 Camsap3-212ENSMUST00000208240 2572 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Vamp8O70404 Anks1-203ENSMUST00000114842 5610 ntAPPRIS P3 TSL 1 (best) BASIC12.32□□□□□ -0.44
Vamp8O70404 Rnf111-201ENSMUST00000034739 4880 ntAPPRIS P2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Vamp8O70404 Ehmt2-204ENSMUST00000114033 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Vamp8O70404 Wnt8b-201ENSMUST00000041163 3376 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Vamp8O70404 Atxn7l3-202ENSMUST00000107132 3706 ntAPPRIS P4 TSL 5 BASIC12.32□□□□□ -0.44
Retrieved 100 of 76,532 protein–RNA pairs in 32.3 ms