Protein–RNA interactions for Protein: O70400

Pdlim1, PDZ and LIM domain protein 1, mousemouse

Predictions only

Length 327 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pdlim1O70400 Tax1bp3-201ENSMUST00000040687 1523 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Pdlim1O70400 Ncor1-203ENSMUST00000069456 3171 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Pdlim1O70400 Tsnax-202ENSMUST00000212603 2169 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Pdlim1O70400 Otud7a-201ENSMUST00000058476 3483 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Pdlim1O70400 Fam109a-201ENSMUST00000056654 2368 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Pdlim1O70400 Fam98a-201ENSMUST00000112507 2817 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Pdlim1O70400 BC034090-204ENSMUST00000186156 4873 ntAPPRIS P5 TSL 5 BASIC17.24■□□□□ 0.35
Pdlim1O70400 Epo-203ENSMUST00000111039 706 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Pdlim1O70400 Mir5122-201ENSMUST00000175004 89 ntBASIC17.24■□□□□ 0.35
Pdlim1O70400 Gm21814-202ENSMUST00000203277 873 ntBASIC17.24■□□□□ 0.35
Pdlim1O70400 Akip1-201ENSMUST00000033335 1028 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Pdlim1O70400 Atp6v1g2-201ENSMUST00000068261 1528 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Pdlim1O70400 Atad2b-201ENSMUST00000045664 8035 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
Pdlim1O70400 Sh3yl1-202ENSMUST00000110880 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Pdlim1O70400 Gm43548-201ENSMUST00000197139 2353 ntBASIC17.24■□□□□ 0.35
Pdlim1O70400 Capn1-202ENSMUST00000164843 3048 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
Pdlim1O70400 Tubb4b-ps1-201ENSMUST00000179460 1336 ntBASIC17.23■□□□□ 0.35
Pdlim1O70400 Mfsd13a-201ENSMUST00000086969 2278 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Pdlim1O70400 Pitx1-201ENSMUST00000021968 2451 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Pdlim1O70400 Ttyh3-202ENSMUST00000197452 4576 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Pdlim1O70400 Odf2-211ENSMUST00000113767 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
Pdlim1O70400 Hoxd4-201ENSMUST00000047904 2560 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
Pdlim1O70400 Rhbdd3-202ENSMUST00000101610 2333 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Pdlim1O70400 Pgap3-205ENSMUST00000128897 1264 ntTSL 5 BASIC17.23■□□□□ 0.35
Pdlim1O70400 B430219N15Rik-201ENSMUST00000147230 835 ntTSL 2 BASIC17.23■□□□□ 0.35
Pdlim1O70400 Gm28374-201ENSMUST00000162374 728 ntAPPRIS P1 TSL 3 BASIC17.23■□□□□ 0.35
Pdlim1O70400 Gm26829-201ENSMUST00000180581 934 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Pdlim1O70400 Gm42738-201ENSMUST00000201813 439 ntTSL 3 BASIC17.23■□□□□ 0.35
Pdlim1O70400 Rpl18a-206ENSMUST00000212709 700 ntTSL 2 BASIC17.23■□□□□ 0.35
Pdlim1O70400 Scrib-201ENSMUST00000002603 5599 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
Pdlim1O70400 Adsl-204ENSMUST00000164806 1595 ntTSL 5 BASIC17.23■□□□□ 0.35
Pdlim1O70400 Pomp-201ENSMUST00000031654 1579 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Pdlim1O70400 Tmed4-201ENSMUST00000004508 2003 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Pdlim1O70400 Zbtb32-202ENSMUST00000108151 1775 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
Pdlim1O70400 Vangl2-203ENSMUST00000111264 2349 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Pdlim1O70400 Ccdc6-203ENSMUST00000147545 5511 ntAPPRIS P1 TSL 5 BASIC17.22■□□□□ 0.35
Pdlim1O70400 Podxl2-201ENSMUST00000038409 1994 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
Pdlim1O70400 Atp6v0a2-201ENSMUST00000037865 5345 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Pdlim1O70400 Rragd-201ENSMUST00000029946 5055 ntTSL 5 BASIC17.22■□□□□ 0.35
Pdlim1O70400 Igsf23-201ENSMUST00000043440 1908 ntAPPRIS P2 TSL 1 (best) BASIC17.22■□□□□ 0.35
Pdlim1O70400 Nfil3-201ENSMUST00000071065 2026 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Pdlim1O70400 Osbpl1a-203ENSMUST00000118313 2893 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Pdlim1O70400 Tmc6-202ENSMUST00000103025 1279 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Pdlim1O70400 Clta-203ENSMUST00000107847 1121 ntTSL 5 BASIC17.22■□□□□ 0.35
Pdlim1O70400 Gssos2-201ENSMUST00000130859 727 ntTSL 3 BASIC17.22■□□□□ 0.35
Pdlim1O70400 Utf1-201ENSMUST00000168457 1227 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Pdlim1O70400 Gm16998-201ENSMUST00000181899 1230 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Pdlim1O70400 Rsu1-209ENSMUST00000191959 720 ntTSL 3 BASIC17.22■□□□□ 0.35
Pdlim1O70400 6530437J22Rik-201ENSMUST00000207515 773 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Pdlim1O70400 4930554C24Rik-202ENSMUST00000216019 1159 ntTSL 5 BASIC17.22■□□□□ 0.35
Pdlim1O70400 Tpsg1-201ENSMUST00000024999 1186 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Pdlim1O70400 4930412O13Rik-201ENSMUST00000026889 1187 ntAPPRIS P5 TSL 1 (best) BASIC17.22■□□□□ 0.35
Pdlim1O70400 Kbtbd13-201ENSMUST00000068307 2969 ntAPPRIS P1 BASIC17.22■□□□□ 0.35
Pdlim1O70400 Coro7-202ENSMUST00000090480 1147 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Pdlim1O70400 Cops9-201ENSMUST00000097642 438 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Pdlim1O70400 Slc30a9-201ENSMUST00000113676 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
Pdlim1O70400 Gm6598-201ENSMUST00000202719 2615 ntBASIC17.22■□□□□ 0.35
Pdlim1O70400 Aurkb-201ENSMUST00000021277 1950 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Pdlim1O70400 Igsf9b-201ENSMUST00000115247 2857 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
Pdlim1O70400 Trip10-205ENSMUST00000224885 2136 ntAPPRIS ALT2 BASIC17.21■□□□□ 0.35
Pdlim1O70400 Insm1-201ENSMUST00000089257 3100 ntAPPRIS P1 BASIC17.21■□□□□ 0.35
Pdlim1O70400 Gls-204ENSMUST00000114513 4966 ntAPPRIS P3 TSL 5 BASIC17.21■□□□□ 0.35
Pdlim1O70400 Kmt5c-201ENSMUST00000098853 2189 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Pdlim1O70400 Nfs1-201ENSMUST00000029147 2051 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Pdlim1O70400 Tmem125-201ENSMUST00000060214 1864 ntAPPRIS P1 TSL 2 BASIC17.21■□□□□ 0.35
Pdlim1O70400 Gm19721-201ENSMUST00000195284 1764 ntBASIC17.21■□□□□ 0.35
Pdlim1O70400 Tekt1-203ENSMUST00000108503 1397 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Pdlim1O70400 Crct1-202ENSMUST00000107301 460 ntAPPRIS P1 TSL 2 BASIC17.21■□□□□ 0.35
Pdlim1O70400 Creb1-203ENSMUST00000171164 1287 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Pdlim1O70400 Ube2a-208ENSMUST00000202812 719 ntTSL 2 BASIC17.21■□□□□ 0.35
Pdlim1O70400 Stard10-211ENSMUST00000210192 1258 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
Pdlim1O70400 Atp2c1-201ENSMUST00000038118 4876 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.35
Pdlim1O70400 Fcho2-208ENSMUST00000224992 2964 ntBASIC17.21■□□□□ 0.35
Pdlim1O70400 Ciz1-201ENSMUST00000048964 2771 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.35
Pdlim1O70400 4930503L19Rik-201ENSMUST00000067556 2291 ntAPPRIS P2 TSL 1 (best) BASIC17.21■□□□□ 0.34
Pdlim1O70400 Gm10300-201ENSMUST00000094662 2296 ntAPPRIS P1 BASIC17.21■□□□□ 0.34
Pdlim1O70400 Lca5l-201ENSMUST00000054855 2508 ntAPPRIS P2 TSL 1 (best) BASIC17.2■□□□□ 0.34
Pdlim1O70400 A130048G24Rik-201ENSMUST00000193052 2750 ntBASIC17.2■□□□□ 0.34
Pdlim1O70400 Atp9a-211ENSMUST00000178504 3668 ntAPPRIS P1 TSL 5 BASIC17.2■□□□□ 0.34
Pdlim1O70400 Gm16105-201ENSMUST00000156926 697 ntTSL 3 BASIC17.2■□□□□ 0.34
Pdlim1O70400 Gm38027-201ENSMUST00000192315 235 ntBASIC17.2■□□□□ 0.34
Pdlim1O70400 Tm2d1-201ENSMUST00000030292 952 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Pdlim1O70400 Mvb12a-201ENSMUST00000034272 1062 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Pdlim1O70400 Cmc1-201ENSMUST00000044220 1169 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Pdlim1O70400 Fxn-201ENSMUST00000081333 1114 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Pdlim1O70400 Gm10461-201ENSMUST00000202073 4786 ntBASIC17.2■□□□□ 0.34
Pdlim1O70400 Rnf112-203ENSMUST00000102661 3118 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Pdlim1O70400 Ddx41-201ENSMUST00000021956 2205 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Pdlim1O70400 Snrnp48-201ENSMUST00000091641 1785 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Pdlim1O70400 Mipol1-201ENSMUST00000123498 2117 ntAPPRIS ALT2 TSL 5 BASIC17.2■□□□□ 0.34
Pdlim1O70400 Cspg5-205ENSMUST00000199736 2107 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Pdlim1O70400 Rbmxl1-201ENSMUST00000049245 1695 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Pdlim1O70400 B3galnt2-204ENSMUST00000221300 2397 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Pdlim1O70400 Crocc-211ENSMUST00000168157 6244 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Pdlim1O70400 Crocc-201ENSMUST00000040222 6248 ntTSL 5 BASIC17.19■□□□□ 0.34
Pdlim1O70400 Slit3-201ENSMUST00000069837 5228 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Pdlim1O70400 Dixdc1-207ENSMUST00000121634 2420 ntTSL 5 BASIC17.19■□□□□ 0.34
Pdlim1O70400 Tmem127-201ENSMUST00000035871 4811 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Pdlim1O70400 A930001A20Rik-201ENSMUST00000182586 1366 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Pdlim1O70400 Dut-201ENSMUST00000051605 1950 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Retrieved 100 of 76,532 protein–RNA pairs in 61 ms