Protein–RNA interactions for Protein: O70309

Itgb5, Integrin beta-5, mousemouse

Predictions only

Length 798 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Itgb5O70309 Erc1-202ENSMUST00000079582 2304 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Itgb5O70309 Gm26798-201ENSMUST00000181384 2837 ntTSL 5 BASIC19.41■□□□□ 0.7
Itgb5O70309 Trim54-201ENSMUST00000013771 1434 ntAPPRIS P2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Itgb5O70309 Irx5-201ENSMUST00000034184 2450 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Itgb5O70309 A530016L24Rik-202ENSMUST00000223266 1547 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Itgb5O70309 Rnf112-201ENSMUST00000054927 3086 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Itgb5O70309 Magi2-203ENSMUST00000115267 4478 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Itgb5O70309 AA467197-202ENSMUST00000110512 751 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Itgb5O70309 H2afz-207ENSMUST00000174561 810 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Itgb5O70309 Vkorc1-203ENSMUST00000206053 606 ntTSL 3 BASIC19.4■□□□□ 0.7
Itgb5O70309 Hist1h2aj-201ENSMUST00000091710 352 ntBASIC19.4■□□□□ 0.7
Itgb5O70309 Negr1-203ENSMUST00000106065 1953 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Itgb5O70309 Aurkb-201ENSMUST00000021277 1950 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Itgb5O70309 Prdm8-202ENSMUST00000210477 3316 ntAPPRIS P1 TSL 5 BASIC19.4■□□□□ 0.7
Itgb5O70309 Nptn-212ENSMUST00000177292 1390 ntAPPRIS P1 TSL 5 BASIC19.4■□□□□ 0.7
Itgb5O70309 Lifr-202ENSMUST00000164529 2844 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
Itgb5O70309 Gm44618-201ENSMUST00000208431 2262 ntTSL 3 BASIC19.4■□□□□ 0.7
Itgb5O70309 Ythdf1-201ENSMUST00000037299 3184 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Itgb5O70309 Brms1l-201ENSMUST00000059250 2609 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
Itgb5O70309 Ctsf-201ENSMUST00000119694 1975 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
Itgb5O70309 4930540M05Rik-201ENSMUST00000180527 2068 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Itgb5O70309 Oxsr1-201ENSMUST00000040853 4647 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Itgb5O70309 Cldn18-203ENSMUST00000131922 860 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Itgb5O70309 Gm28876-201ENSMUST00000188137 703 ntTSL 3 BASIC19.39■□□□□ 0.69
Itgb5O70309 Itgb5-202ENSMUST00000115028 3090 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Itgb5O70309 Lhfp-201ENSMUST00000059562 2108 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Itgb5O70309 Runx2-204ENSMUST00000159943 2316 ntAPPRIS P3 TSL 1 (best) BASIC19.39■□□□□ 0.69
Itgb5O70309 Cyb5d2-201ENSMUST00000079681 2393 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Itgb5O70309 Dnajb9-201ENSMUST00000015049 2461 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Itgb5O70309 Gabbr1-201ENSMUST00000025338 5248 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Itgb5O70309 Cers1-202ENSMUST00000140239 2711 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
Itgb5O70309 Vhl-201ENSMUST00000035673 2792 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Itgb5O70309 Trp73-203ENSMUST00000105643 1916 ntAPPRIS ALT2 TSL 5 BASIC19.38■□□□□ 0.69
Itgb5O70309 Crct1-202ENSMUST00000107301 460 ntAPPRIS P1 TSL 2 BASIC19.38■□□□□ 0.69
Itgb5O70309 Gmcl1-202ENSMUST00000113679 960 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Itgb5O70309 Gprc5c-203ENSMUST00000122967 1709 ntTSL 5 BASIC19.38■□□□□ 0.69
Itgb5O70309 Klhl33-201ENSMUST00000164415 1602 ntTSL 5 BASIC19.38■□□□□ 0.69
Itgb5O70309 Ccdc125-202ENSMUST00000170347 1216 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
Itgb5O70309 Pagr1a-202ENSMUST00000200948 1430 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Itgb5O70309 Gm42742-205ENSMUST00000202798 1412 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Itgb5O70309 Otud7a-201ENSMUST00000058476 3483 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Itgb5O70309 Krt13-201ENSMUST00000007275 1654 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Itgb5O70309 Gls-202ENSMUST00000114510 5596 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
Itgb5O70309 Fam78b-205ENSMUST00000165874 4986 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Itgb5O70309 Bpnt1-202ENSMUST00000110965 1046 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Itgb5O70309 Gm2431-201ENSMUST00000171531 519 ntAPPRIS P1 TSL 5 BASIC19.37■□□□□ 0.69
Itgb5O70309 Gm20033-201ENSMUST00000180470 572 ntTSL 3 BASIC19.37■□□□□ 0.69
Itgb5O70309 Grtp1-204ENSMUST00000209691 1030 ntTSL 5 BASIC19.37■□□□□ 0.69
Itgb5O70309 AC134329.2-201ENSMUST00000217897 428 ntBASIC19.37■□□□□ 0.69
Itgb5O70309 Rpl39l-201ENSMUST00000044103 805 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Itgb5O70309 Spsb2-202ENSMUST00000052727 1219 ntAPPRIS P1 TSL 3 BASIC19.37■□□□□ 0.69
Itgb5O70309 Vpreb1-201ENSMUST00000075017 766 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Itgb5O70309 Gas2-201ENSMUST00000051912 2181 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Itgb5O70309 Hmga1-204ENSMUST00000118570 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Itgb5O70309 Dnajb2-208ENSMUST00000188346 1823 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Itgb5O70309 Grk2-202ENSMUST00000088737 3376 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Itgb5O70309 4930448E22Rik-201ENSMUST00000181712 1581 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Itgb5O70309 B3gnt2-202ENSMUST00000062844 3057 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Itgb5O70309 Hikeshi-206ENSMUST00000153470 2224 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Itgb5O70309 Lhx6-208ENSMUST00000148852 1481 ntTSL 5 BASIC19.36■□□□□ 0.69
Itgb5O70309 Gm7854-202ENSMUST00000187409 1433 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Itgb5O70309 4933428G20Rik-201ENSMUST00000056955 1425 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Itgb5O70309 Ano10-206ENSMUST00000216670 2108 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Itgb5O70309 Dap3-201ENSMUST00000090938 4760 ntAPPRIS P2 TSL 1 (best) BASIC19.36■□□□□ 0.69
Itgb5O70309 Igfbp2-201ENSMUST00000047328 1307 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Itgb5O70309 Gm10013-201ENSMUST00000106074 672 ntBASIC19.36■□□□□ 0.69
Itgb5O70309 Arnt-204ENSMUST00000107160 783 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Itgb5O70309 A430033K04Rik-204ENSMUST00000200521 1110 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Itgb5O70309 A430033K04Rik-201ENSMUST00000032590 1109 ntTSL 5 BASIC19.36■□□□□ 0.69
Itgb5O70309 Fmnl2-201ENSMUST00000049483 5461 ntTSL 5 BASIC19.36■□□□□ 0.69
Itgb5O70309 Ldlrad4-201ENSMUST00000063775 2493 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Itgb5O70309 Cxcl14-201ENSMUST00000021970 1827 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Itgb5O70309 Snrnp48-201ENSMUST00000091641 1785 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Itgb5O70309 Tlcd2-202ENSMUST00000108435 1112 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
Itgb5O70309 Gm13474-201ENSMUST00000122466 815 ntBASIC19.35■□□□□ 0.69
Itgb5O70309 Gm22697-201ENSMUST00000175194 63 ntBASIC19.35■□□□□ 0.69
Itgb5O70309 Lce1h-201ENSMUST00000051521 706 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Itgb5O70309 Adam15-203ENSMUST00000107446 1686 ntTSL 5 BASIC19.35■□□□□ 0.69
Itgb5O70309 Trmt61a-201ENSMUST00000084947 2433 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Itgb5O70309 Ncoa5-203ENSMUST00000122070 3117 ntTSL 5 BASIC19.35■□□□□ 0.69
Itgb5O70309 Mex3b-201ENSMUST00000082237 3355 ntAPPRIS P1 TSL 2 BASIC19.35■□□□□ 0.69
Itgb5O70309 Mtg2-202ENSMUST00000108901 1444 ntAPPRIS P1 TSL 5 BASIC19.34■□□□□ 0.69
Itgb5O70309 Mmp15-201ENSMUST00000034243 5135 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Itgb5O70309 Ndufa10-201ENSMUST00000027478 2020 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Itgb5O70309 Zpbp2-202ENSMUST00000081033 1300 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Itgb5O70309 Smad7-201ENSMUST00000026999 4278 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Itgb5O70309 Pacs2-207ENSMUST00000223502 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
Itgb5O70309 Gm5577-203ENSMUST00000153372 815 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Itgb5O70309 Gm23634-201ENSMUST00000175071 91 ntBASIC19.34■□□□□ 0.69
Itgb5O70309 Fam92a-201ENSMUST00000087052 1292 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
Itgb5O70309 Prdm6-203ENSMUST00000115399 2227 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
Itgb5O70309 Adcy3-202ENSMUST00000124505 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Itgb5O70309 Nrxn2-205ENSMUST00000113462 6667 ntAPPRIS P4 TSL 1 (best) BASIC19.34■□□□□ 0.69
Itgb5O70309 Dmtn-207ENSMUST00000228001 2437 ntBASIC19.34■□□□□ 0.69
Itgb5O70309 Syncrip-201ENSMUST00000069221 9450 ntAPPRIS P3 TSL 1 (best) BASIC19.34■□□□□ 0.69
Itgb5O70309 Tmem62-201ENSMUST00000067582 2921 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Itgb5O70309 March11-203ENSMUST00000152841 1365 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.69
Itgb5O70309 Kcns1-201ENSMUST00000045196 2712 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Itgb5O70309 Spsb2-203ENSMUST00000112473 1322 ntBASIC19.33■□□□□ 0.69
Itgb5O70309 Klhl25-202ENSMUST00000171155 3403 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Retrieved 100 of 76,532 protein–RNA pairs in 17.9 ms