Protein–RNA interactions for Protein: O55229

Chkb, Choline/ethanolamine kinase, mousemouse

Predictions only

Length 394 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ChkbO55229 Kctd13-201ENSMUST00000032924 1676 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
ChkbO55229 Zbtb32-202ENSMUST00000108151 1775 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
ChkbO55229 Puf60-201ENSMUST00000002599 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
ChkbO55229 Rbm33-204ENSMUST00000114884 6256 ntAPPRIS ALT2 TSL 5 BASIC18.62■□□□□ 0.57
ChkbO55229 Tlk1-201ENSMUST00000038584 4280 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
ChkbO55229 Alcam-201ENSMUST00000023312 6036 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
ChkbO55229 Stmn4-203ENSMUST00000120229 1281 ntTSL 2 BASIC18.62■□□□□ 0.57
ChkbO55229 Pabpn1-205ENSMUST00000141446 912 ntAPPRIS ALT2 TSL 3 BASIC18.62■□□□□ 0.57
ChkbO55229 Gm8969-201ENSMUST00000199694 526 ntBASIC18.62■□□□□ 0.57
ChkbO55229 Etnk1-201ENSMUST00000032413 6433 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
ChkbO55229 Idnk-202ENSMUST00000109868 1462 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
ChkbO55229 Ankle1-202ENSMUST00000120725 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
ChkbO55229 Sgsm2-202ENSMUST00000081799 4873 ntAPPRIS ALT2 TSL 5 BASIC18.62■□□□□ 0.57
ChkbO55229 Yipf2-202ENSMUST00000078572 1894 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
ChkbO55229 Senp3-202ENSMUST00000066760 2219 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
ChkbO55229 Mepce-201ENSMUST00000031740 3128 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
ChkbO55229 Rasa2-201ENSMUST00000034984 5813 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
ChkbO55229 Pld2-201ENSMUST00000018429 3659 ntAPPRIS P3 TSL 1 (best) BASIC18.61■□□□□ 0.57
ChkbO55229 Smurf2-201ENSMUST00000092517 3125 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
ChkbO55229 Impdh1-210ENSMUST00000162739 2471 ntTSL 5 BASIC18.61■□□□□ 0.57
ChkbO55229 Dock3-201ENSMUST00000044532 9063 ntAPPRIS P1 TSL 2 BASIC18.61■□□□□ 0.57
ChkbO55229 Tmem145-202ENSMUST00000119703 1781 ntAPPRIS ALT2 TSL 5 BASIC18.61■□□□□ 0.57
ChkbO55229 Anks1b-225ENSMUST00000182966 1625 ntTSL 5 BASIC18.61■□□□□ 0.57
ChkbO55229 H2afx-201ENSMUST00000052686 1384 ntAPPRIS P1 BASIC18.61■□□□□ 0.57
ChkbO55229 Etv2-201ENSMUST00000108147 1048 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
ChkbO55229 Cox16-207ENSMUST00000169124 685 ntTSL 2 BASIC18.61■□□□□ 0.57
ChkbO55229 Map1lc3b-203ENSMUST00000181521 775 ntTSL 3 BASIC18.61■□□□□ 0.57
ChkbO55229 Zfand3-202ENSMUST00000226208 923 ntAPPRIS P1 BASIC18.61■□□□□ 0.57
ChkbO55229 Spcs1-207ENSMUST00000228767 1008 ntBASIC18.61■□□□□ 0.57
ChkbO55229 Rbks-201ENSMUST00000031018 1042 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
ChkbO55229 Mapkapk3-201ENSMUST00000035194 2816 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
ChkbO55229 Picalm-206ENSMUST00000207484 8209 ntAPPRIS P3 TSL 1 (best) BASIC18.61■□□□□ 0.57
ChkbO55229 Col17a1-202ENSMUST00000086923 5477 ntAPPRIS P3 TSL 1 (best) BASIC18.61■□□□□ 0.57
ChkbO55229 Xiap-203ENSMUST00000115094 6542 ntAPPRIS P1 TSL 5 BASIC18.61■□□□□ 0.57
ChkbO55229 Dgkz-201ENSMUST00000028667 3584 ntAPPRIS P2 TSL 1 (best) BASIC18.61■□□□□ 0.57
ChkbO55229 Smpdl3b-201ENSMUST00000030709 2006 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
ChkbO55229 Med9-201ENSMUST00000081980 1920 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
ChkbO55229 Gpat3-203ENSMUST00000112887 3059 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
ChkbO55229 Rnpc3-203ENSMUST00000106536 1839 ntAPPRIS P3 TSL 1 (best) BASIC18.6■□□□□ 0.57
ChkbO55229 Tsks-201ENSMUST00000080233 1806 ntAPPRIS P3 TSL 1 (best) BASIC18.6■□□□□ 0.57
ChkbO55229 Gpr84-201ENSMUST00000079824 1550 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
ChkbO55229 Fiz1-208ENSMUST00000208944 2306 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
ChkbO55229 Smim27-201ENSMUST00000129758 1044 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
ChkbO55229 Ptbp3-204ENSMUST00000140925 606 ntTSL 3 BASIC18.6■□□□□ 0.57
ChkbO55229 Cadm1-201ENSMUST00000034581 1254 ntAPPRIS ALT1 TSL 1 (best) BASIC18.6■□□□□ 0.57
ChkbO55229 Cldn3-201ENSMUST00000094245 1259 ntAPPRIS P1 BASIC18.6■□□□□ 0.57
ChkbO55229 Prcc-201ENSMUST00000005015 2099 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
ChkbO55229 Arhgef16-201ENSMUST00000030898 2860 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
ChkbO55229 Flot1-201ENSMUST00000001569 1825 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
ChkbO55229 A730089K16Rik-201ENSMUST00000194526 2427 ntBASIC18.6■□□□□ 0.57
ChkbO55229 Crtap-201ENSMUST00000084881 1674 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
ChkbO55229 Taf6l-205ENSMUST00000176496 2224 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
ChkbO55229 Gtpbp3-208ENSMUST00000168847 2803 ntAPPRIS ALT2 TSL 5 BASIC18.59■□□□□ 0.57
ChkbO55229 A430057M04Rik-202ENSMUST00000170150 2176 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
ChkbO55229 Apba3-201ENSMUST00000057798 2106 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
ChkbO55229 Bcr-201ENSMUST00000164107 6839 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
ChkbO55229 Nrm-201ENSMUST00000074259 1466 ntAPPRIS P2 TSL 1 (best) BASIC18.59■□□□□ 0.57
ChkbO55229 Prr22-201ENSMUST00000168666 1350 ntAPPRIS P1 TSL 3 BASIC18.59■□□□□ 0.57
ChkbO55229 Pgm3-202ENSMUST00000072585 1920 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
ChkbO55229 Ly6h-204ENSMUST00000127095 1336 ntAPPRIS P3 TSL 1 (best) BASIC18.59■□□□□ 0.57
ChkbO55229 Rab1b-201ENSMUST00000025804 1835 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
ChkbO55229 Gm7290-201ENSMUST00000104990 617 ntBASIC18.59■□□□□ 0.57
ChkbO55229 Stxbp3-202ENSMUST00000106596 553 ntTSL 2 BASIC18.59■□□□□ 0.57
ChkbO55229 Clta-201ENSMUST00000107845 1031 ntAPPRIS ALT2 TSL 2 BASIC18.59■□□□□ 0.57
ChkbO55229 Gm12918-201ENSMUST00000120234 636 ntBASIC18.59■□□□□ 0.57
ChkbO55229 Gm15710-201ENSMUST00000121821 636 ntBASIC18.59■□□□□ 0.57
ChkbO55229 1700003N22Rik-201ENSMUST00000194834 808 ntBASIC18.59■□□□□ 0.57
ChkbO55229 Gm5075-201ENSMUST00000196916 622 ntBASIC18.59■□□□□ 0.57
ChkbO55229 Rpl13-ps6-201ENSMUST00000079761 636 ntBASIC18.59■□□□□ 0.57
ChkbO55229 Rpl13-ps3-201ENSMUST00000079960 624 ntBASIC18.59■□□□□ 0.57
ChkbO55229 Jmy-201ENSMUST00000065537 8776 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
ChkbO55229 4930426D05Rik-202ENSMUST00000139804 1650 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
ChkbO55229 Cfap36-201ENSMUST00000020754 1664 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
ChkbO55229 Cdkl3-203ENSMUST00000109076 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
ChkbO55229 Acbd4-201ENSMUST00000024492 2075 ntAPPRIS P1 TSL 5 BASIC18.59■□□□□ 0.57
ChkbO55229 Baz1a-205ENSMUST00000173433 5788 ntAPPRIS P2 TSL 5 BASIC18.59■□□□□ 0.57
ChkbO55229 Idnk-204ENSMUST00000226010 1898 ntBASIC18.58■□□□□ 0.57
ChkbO55229 Add1-204ENSMUST00000114338 4007 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.57
ChkbO55229 Abhd5-204ENSMUST00000156520 3157 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
ChkbO55229 1700030C12Rik-201ENSMUST00000101462 858 ntTSL 5 BASIC18.58■□□□□ 0.56
ChkbO55229 Zfp637-201ENSMUST00000112858 650 ntTSL 2 BASIC18.58■□□□□ 0.56
ChkbO55229 Zfp637-203ENSMUST00000112860 1231 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
ChkbO55229 Gm3807-201ENSMUST00000193520 1168 ntBASIC18.58■□□□□ 0.56
ChkbO55229 Gm46218-201ENSMUST00000215448 801 ntTSL 5 BASIC18.58■□□□□ 0.56
ChkbO55229 AC160393.1-201ENSMUST00000218378 1279 ntBASIC18.58■□□□□ 0.56
ChkbO55229 Grrp1-201ENSMUST00000060050 1226 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
ChkbO55229 Sorcs3-201ENSMUST00000078880 5634 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
ChkbO55229 Krt12-201ENSMUST00000017741 1852 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
ChkbO55229 Gm6209-202ENSMUST00000194629 1506 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
ChkbO55229 Tlk2-204ENSMUST00000106941 3699 ntAPPRIS ALT1 TSL 1 (best) BASIC18.58■□□□□ 0.56
ChkbO55229 Dvl2-201ENSMUST00000019362 2968 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
ChkbO55229 Cnot9-201ENSMUST00000087215 3268 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
ChkbO55229 Caml-201ENSMUST00000021963 1382 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
ChkbO55229 Aqp5-201ENSMUST00000088200 1376 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
ChkbO55229 Paqr6-204ENSMUST00000147991 1670 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
ChkbO55229 Krt6a-201ENSMUST00000023788 2256 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
ChkbO55229 Bub3-201ENSMUST00000084502 2218 ntAPPRIS P2 TSL 1 (best) BASIC18.57■□□□□ 0.56
ChkbO55229 Gpr137b-ps-203ENSMUST00000220758 1942 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
ChkbO55229 Casd1-201ENSMUST00000015333 3961 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
ChkbO55229 Rara-204ENSMUST00000107475 2469 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Retrieved 100 of 76,532 protein–RNA pairs in 17.5 ms