Protein–RNA interactions for Protein: O55176

Pja1, E3 ubiquitin-protein ligase Praja-1, mousemouse

Predictions only

Length 578 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pja1O55176 Zfp467-201ENSMUST00000101443 599 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Pja1O55176 1700030C12Rik-201ENSMUST00000101462 858 ntTSL 5 BASIC18.5■□□□□ 0.55
Pja1O55176 Pigp-202ENSMUST00000113906 745 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Pja1O55176 Gm40460-201ENSMUST00000211591 735 ntAPPRIS P1 BASIC18.5■□□□□ 0.55
Pja1O55176 Smn1-201ENSMUST00000022147 1222 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Pja1O55176 Ociad2-202ENSMUST00000200776 2359 ntTSL 3 BASIC18.5■□□□□ 0.55
Pja1O55176 Rara-204ENSMUST00000107475 2469 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Pja1O55176 Uhrf2-201ENSMUST00000025739 3536 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Pja1O55176 Nelfb-201ENSMUST00000059849 2637 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Pja1O55176 Rtkn-201ENSMUST00000065512 2191 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
Pja1O55176 A530084C06Rik-201ENSMUST00000170573 3200 ntAPPRIS P1 BASIC18.49■□□□□ 0.55
Pja1O55176 Larp1b-206ENSMUST00000191872 1505 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
Pja1O55176 Gm10649-203ENSMUST00000148066 1812 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Pja1O55176 A130014A01Rik-201ENSMUST00000183021 2323 ntBASIC18.49■□□□□ 0.55
Pja1O55176 Srf-201ENSMUST00000015749 4093 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Pja1O55176 Pi16-201ENSMUST00000114699 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
Pja1O55176 Apoe-205ENSMUST00000173739 1221 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Pja1O55176 Apoe-209ENSMUST00000174355 1104 ntAPPRIS P1 TSL 5 BASIC18.49■□□□□ 0.55
Pja1O55176 Naxe-201ENSMUST00000029708 908 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Pja1O55176 Apoe-201ENSMUST00000003066 1128 ntAPPRIS P1 TSL 5 BASIC18.49■□□□□ 0.55
Pja1O55176 Pacsin3-201ENSMUST00000028694 1862 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Pja1O55176 Cdipt-201ENSMUST00000032920 1974 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Pja1O55176 Mcl1-201ENSMUST00000037947 3418 ntAPPRIS P2 TSL 1 (best) BASIC18.49■□□□□ 0.55
Pja1O55176 Sfrp2-201ENSMUST00000029625 2003 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Pja1O55176 Aida-206ENSMUST00000193625 1810 ntTSL 3 BASIC18.49■□□□□ 0.55
Pja1O55176 Lonp1-201ENSMUST00000047226 2963 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Pja1O55176 Ddx41-204ENSMUST00000224765 2199 ntBASIC18.48■□□□□ 0.55
Pja1O55176 Hmces-202ENSMUST00000113606 1572 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Pja1O55176 Gm13401-201ENSMUST00000117074 291 ntBASIC18.48■□□□□ 0.55
Pja1O55176 Atraid-201ENSMUST00000013766 966 ntAPPRIS P2 TSL 1 (best) BASIC18.48■□□□□ 0.55
Pja1O55176 Zfp428-203ENSMUST00000177205 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
Pja1O55176 Nat8-201ENSMUST00000032073 1123 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Pja1O55176 Ttc32-201ENSMUST00000085741 1000 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Pja1O55176 Eral1-201ENSMUST00000021183 2014 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Pja1O55176 Lat2-202ENSMUST00000077636 1717 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
Pja1O55176 Tmf1-201ENSMUST00000095664 5732 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Pja1O55176 Snx11-202ENSMUST00000107661 2197 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Pja1O55176 Gm45472-201ENSMUST00000211295 1426 ntTSL 5 BASIC18.48■□□□□ 0.55
Pja1O55176 Ern1-204ENSMUST00000106801 1957 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
Pja1O55176 Sept4-205ENSMUST00000107962 1678 ntAPPRIS ALT1 TSL 5 BASIC18.47■□□□□ 0.55
Pja1O55176 Nfatc3-201ENSMUST00000109308 5984 ntAPPRIS P2 TSL 1 (best) BASIC18.47■□□□□ 0.55
Pja1O55176 Flg-201ENSMUST00000050758 1488 ntBASIC18.47■□□□□ 0.55
Pja1O55176 Tmem214-202ENSMUST00000201203 6110 ntAPPRIS P2 TSL 1 (best) BASIC18.47■□□□□ 0.55
Pja1O55176 Gm13148-201ENSMUST00000118892 745 ntBASIC18.47■□□□□ 0.55
Pja1O55176 Josd2-205ENSMUST00000120852 727 ntAPPRIS P1 TSL 3 BASIC18.47■□□□□ 0.55
Pja1O55176 AC133650.2-201ENSMUST00000217036 607 ntTSL 3 BASIC18.47■□□□□ 0.55
Pja1O55176 Asph-201ENSMUST00000038564 1174 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Pja1O55176 Fam96b-201ENSMUST00000093234 639 ntTSL 5 BASIC18.47■□□□□ 0.55
Pja1O55176 Asph-205ENSMUST00000098275 1007 ntTSL 5 BASIC18.47■□□□□ 0.55
Pja1O55176 Ube2d3-202ENSMUST00000166033 2504 ntAPPRIS P2 TSL 1 (best) BASIC18.47■□□□□ 0.55
Pja1O55176 Adcy2-201ENSMUST00000022013 4211 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Pja1O55176 Gm19531-201ENSMUST00000216737 1377 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
Pja1O55176 Nr1d2-201ENSMUST00000090543 4663 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Pja1O55176 Mpig6b-201ENSMUST00000097337 2252 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
Pja1O55176 Hpn-209ENSMUST00000168884 1762 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Pja1O55176 F2rl3-201ENSMUST00000058099 1751 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Pja1O55176 Stxbp3-202ENSMUST00000106596 553 ntTSL 2 BASIC18.46■□□□□ 0.55
Pja1O55176 Rpusd3-202ENSMUST00000113092 1269 ntAPPRIS P2 TSL 1 (best) BASIC18.46■□□□□ 0.55
Pja1O55176 Gm6916-201ENSMUST00000205277 828 ntTSL 3 BASIC18.46■□□□□ 0.55
Pja1O55176 Prmt1-205ENSMUST00000207659 945 ntTSL 5 BASIC18.46■□□□□ 0.55
Pja1O55176 Mrpl9-202ENSMUST00000196143 1657 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
Pja1O55176 E230001N04Rik-202ENSMUST00000181029 2091 ntBASIC18.46■□□□□ 0.55
Pja1O55176 Proc-201ENSMUST00000171765 1566 ntAPPRIS P1 TSL 5 BASIC18.46■□□□□ 0.55
Pja1O55176 Igdcc4-205ENSMUST00000213533 6220 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
Pja1O55176 Igdcc4-201ENSMUST00000035499 6223 ntAPPRIS P2 TSL 1 (best) BASIC18.46■□□□□ 0.55
Pja1O55176 C1qtnf12-201ENSMUST00000024338 1315 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Pja1O55176 Dnlz-201ENSMUST00000028295 2916 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Pja1O55176 Gm15743-202ENSMUST00000182690 1901 ntBASIC18.45■□□□□ 0.54
Pja1O55176 Tbc1d13-201ENSMUST00000044556 3595 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Pja1O55176 9430097D07Rik-201ENSMUST00000100190 1501 ntAPPRIS P1 BASIC18.45■□□□□ 0.54
Pja1O55176 Sprtn-201ENSMUST00000034467 4464 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Pja1O55176 Fdx1l-201ENSMUST00000010348 812 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Pja1O55176 Snca-201ENSMUST00000114268 1280 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Pja1O55176 Josd2-203ENSMUST00000118493 922 ntAPPRIS P1 TSL 5 BASIC18.45■□□□□ 0.54
Pja1O55176 4933406B15Rik-201ENSMUST00000220065 1182 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
Pja1O55176 Cdkn2a-201ENSMUST00000060501 852 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
Pja1O55176 Dnajc19-201ENSMUST00000011029 2499 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
Pja1O55176 Naif1-201ENSMUST00000048431 4650 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Pja1O55176 Hoxb6-201ENSMUST00000000704 1321 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Pja1O55176 4833418N02Rik-202ENSMUST00000146560 1495 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
Pja1O55176 Henmt1-202ENSMUST00000098680 1466 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
Pja1O55176 Mink1-205ENSMUST00000102559 4865 ntAPPRIS P4 TSL 1 (best) BASIC18.45■□□□□ 0.54
Pja1O55176 Rala-201ENSMUST00000009003 2688 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Pja1O55176 AW011738-201ENSMUST00000105140 1848 ntAPPRIS P1 BASIC18.44■□□□□ 0.54
Pja1O55176 Med18-201ENSMUST00000102567 1675 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Pja1O55176 Xpr1-202ENSMUST00000111774 2753 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
Pja1O55176 Raver2-201ENSMUST00000038463 4045 ntAPPRIS P2 TSL 1 (best) BASIC18.44■□□□□ 0.54
Pja1O55176 Lzts2-201ENSMUST00000039016 2825 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Pja1O55176 Trmo-202ENSMUST00000086563 1554 ntAPPRIS P3 TSL 1 (best) BASIC18.44■□□□□ 0.54
Pja1O55176 Rpl27-202ENSMUST00000107249 732 ntAPPRIS P1 TSL 2 BASIC18.44■□□□□ 0.54
Pja1O55176 Speg-206ENSMUST00000122266 917 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
Pja1O55176 Gm4881-201ENSMUST00000206705 1152 ntAPPRIS P1 TSL 5 BASIC18.44■□□□□ 0.54
Pja1O55176 Slc43a1-202ENSMUST00000111624 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC18.44■□□□□ 0.54
Pja1O55176 Chpt1-201ENSMUST00000020253 3898 ntAPPRIS P3 TSL 1 (best) BASIC18.44■□□□□ 0.54
Pja1O55176 Zranb2-203ENSMUST00000106058 2924 ntAPPRIS P2 TSL 1 (best) BASIC18.44■□□□□ 0.54
Pja1O55176 Sgsm1-204ENSMUST00000112325 2274 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
Pja1O55176 Nsmf-201ENSMUST00000006646 2922 ntAPPRIS P3 TSL 1 (best) BASIC18.44■□□□□ 0.54
Pja1O55176 Zbtb9-201ENSMUST00000120016 2798 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Pja1O55176 Ttpal-202ENSMUST00000109408 1999 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Pja1O55176 Ptpre-207ENSMUST00000211140 5753 ntAPPRIS P3 TSL 1 (best) BASIC18.44■□□□□ 0.54
Retrieved 100 of 76,532 protein–RNA pairs in 19.6 ms