Protein–RNA interactions for Protein: O54990

Prom1, Prominin-1, mousemouse

Predictions only

Length 867 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prom1O54990 Pabpc1l2b-ps-201ENSMUST00000124538 690 ntBASIC19.3■□□□□ 0.68
Prom1O54990 Ppdpf-201ENSMUST00000016488 1160 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Prom1O54990 Taar2-201ENSMUST00000079134 1020 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Prom1O54990 Znhit1-202ENSMUST00000085941 740 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Prom1O54990 Trmt11-201ENSMUST00000019927 2359 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Prom1O54990 Prss54-205ENSMUST00000213096 1501 ntAPPRIS P3 TSL 5 BASIC19.3■□□□□ 0.68
Prom1O54990 Pias2-202ENSMUST00000114777 4968 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Prom1O54990 Eml4-203ENSMUST00000112363 5238 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
Prom1O54990 Rapgefl1-202ENSMUST00000107479 4855 ntAPPRIS P1 TSL 5 BASIC19.29■□□□□ 0.68
Prom1O54990 4930401G09Rik-201ENSMUST00000139500 637 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Prom1O54990 Utp23-204ENSMUST00000161651 582 ntTSL 5 BASIC19.29■□□□□ 0.68
Prom1O54990 Gm43791-201ENSMUST00000202914 468 ntTSL 5 BASIC19.29■□□□□ 0.68
Prom1O54990 Sox6os-201ENSMUST00000032900 420 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Prom1O54990 C1qbp-201ENSMUST00000078528 1175 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Prom1O54990 Pde7a-202ENSMUST00000099195 6298 ntAPPRIS ALT1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Prom1O54990 Trmo-201ENSMUST00000030015 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
Prom1O54990 Ache-202ENSMUST00000085934 2176 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Prom1O54990 Ythdc1-202ENSMUST00000119339 3222 ntAPPRIS ALT2 TSL 5 BASIC19.29■□□□□ 0.68
Prom1O54990 Akain1-201ENSMUST00000169935 2296 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Prom1O54990 Cyp26c1-201ENSMUST00000073391 1747 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Prom1O54990 Chmp6-201ENSMUST00000026434 1557 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Prom1O54990 Gm15645-201ENSMUST00000131504 2208 ntTSL 5 BASIC19.28■□□□□ 0.68
Prom1O54990 Galnt9-201ENSMUST00000040001 2883 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Prom1O54990 Agfg1-205ENSMUST00000187899 2078 ntTSL 5 BASIC19.28■□□□□ 0.68
Prom1O54990 Tyk2-205ENSMUST00000214864 1662 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Prom1O54990 Gm17971-201ENSMUST00000190239 806 ntBASIC19.28■□□□□ 0.68
Prom1O54990 AC156832.2-201ENSMUST00000216217 1295 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Prom1O54990 Prss40-201ENSMUST00000047840 1275 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Prom1O54990 Tnk1-202ENSMUST00000108626 1798 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Prom1O54990 Tada2b-201ENSMUST00000031097 3791 ntAPPRIS P1 TSL 2 BASIC19.28■□□□□ 0.68
Prom1O54990 Rbm18-201ENSMUST00000028251 2617 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Prom1O54990 Gm7008-201ENSMUST00000038121 1366 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Prom1O54990 Adamtsl5-201ENSMUST00000095446 1957 ntAPPRIS P1 TSL 5 BASIC19.28■□□□□ 0.68
Prom1O54990 G730003C15Rik-202ENSMUST00000189096 2309 ntBASIC19.28■□□□□ 0.68
Prom1O54990 Znrf1-205ENSMUST00000172856 4600 ntAPPRIS P1 TSL 5 BASIC19.28■□□□□ 0.68
Prom1O54990 Gm15582-201ENSMUST00000132849 1581 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
Prom1O54990 Egln1-201ENSMUST00000034469 3594 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Prom1O54990 Prdm8-202ENSMUST00000210477 3316 ntAPPRIS P1 TSL 5 BASIC19.27■□□□□ 0.68
Prom1O54990 Wnt10b-203ENSMUST00000226610 2217 ntAPPRIS P1 BASIC19.27■□□□□ 0.68
Prom1O54990 Ube2h-202ENSMUST00000102993 4657 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Prom1O54990 Nrxn2-201ENSMUST00000077182 6059 ntAPPRIS ALT2 TSL 5 BASIC19.27■□□□□ 0.68
Prom1O54990 Elf2-212ENSMUST00000194641 5919 ntAPPRIS P3 TSL 5 BASIC19.27■□□□□ 0.68
Prom1O54990 Gm2431-201ENSMUST00000171531 519 ntAPPRIS P1 TSL 5 BASIC19.27■□□□□ 0.68
Prom1O54990 Gm26620-201ENSMUST00000180542 817 ntAPPRIS P1 BASIC19.27■□□□□ 0.68
Prom1O54990 Gm28033-201ENSMUST00000184224 96 ntBASIC19.27■□□□□ 0.68
Prom1O54990 Gm10358-201ENSMUST00000212864 1250 ntAPPRIS P1 BASIC19.27■□□□□ 0.68
Prom1O54990 Gm26709-203ENSMUST00000223260 715 ntTSL 5 BASIC19.27■□□□□ 0.68
Prom1O54990 Alkbh2-201ENSMUST00000053657 1073 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Prom1O54990 Gmnn-201ENSMUST00000006898 1127 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Prom1O54990 Olfr315-201ENSMUST00000081533 998 ntAPPRIS P1 BASIC19.27■□□□□ 0.68
Prom1O54990 Mta3-203ENSMUST00000112350 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
Prom1O54990 Camsap3-207ENSMUST00000207712 2539 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
Prom1O54990 Dmap1-201ENSMUST00000102687 1566 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
Prom1O54990 Zfp523-202ENSMUST00000073534 2654 ntAPPRIS P1 TSL 5 BASIC19.27■□□□□ 0.67
Prom1O54990 Trp73-204ENSMUST00000105644 5042 ntAPPRIS P3 TSL 1 (best) BASIC19.26■□□□□ 0.67
Prom1O54990 Negr1-201ENSMUST00000041425 2095 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Prom1O54990 Prps1l3-201ENSMUST00000139049 1720 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Prom1O54990 Mtmr14-201ENSMUST00000113146 2676 ntAPPRIS P2 TSL 1 (best) BASIC19.26■□□□□ 0.67
Prom1O54990 Serac1-201ENSMUST00000024570 2033 ntAPPRIS P3 TSL 1 (best) BASIC19.26■□□□□ 0.67
Prom1O54990 Mocs1-202ENSMUST00000165390 729 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Prom1O54990 Snhg10-202ENSMUST00000222812 527 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Prom1O54990 Ndufb8-201ENSMUST00000026222 680 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Prom1O54990 Dnajc2-201ENSMUST00000030771 2133 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Prom1O54990 Hmgb3-202ENSMUST00000072699 1571 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Prom1O54990 Astn2-202ENSMUST00000084496 4675 ntAPPRIS ALT2 TSL 5 BASIC19.26■□□□□ 0.67
Prom1O54990 Gm44618-201ENSMUST00000208431 2262 ntTSL 3 BASIC19.26■□□□□ 0.67
Prom1O54990 Fam83d-201ENSMUST00000029183 2266 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Prom1O54990 Hmg20b-213ENSMUST00000167481 1321 ntAPPRIS P1 TSL 5 BASIC19.25■□□□□ 0.67
Prom1O54990 Eme2-202ENSMUST00000121542 1521 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Prom1O54990 Nr2f1-201ENSMUST00000091458 3207 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Prom1O54990 Hunk-201ENSMUST00000065856 5009 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Prom1O54990 Slc7a10-201ENSMUST00000001854 1953 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Prom1O54990 Gm20460-201ENSMUST00000168709 1572 ntTSL 5 BASIC19.25■□□□□ 0.67
Prom1O54990 Tagln-201ENSMUST00000034590 1595 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Prom1O54990 Sap18-202ENSMUST00000111268 662 ntTSL 2 BASIC19.25■□□□□ 0.67
Prom1O54990 Gm15952-201ENSMUST00000122858 490 ntTSL 3 BASIC19.25■□□□□ 0.67
Prom1O54990 Flt3l-206ENSMUST00000210197 834 ntAPPRIS ALT2 TSL 5 BASIC19.25■□□□□ 0.67
Prom1O54990 Hist1h2af-201ENSMUST00000073261 399 ntAPPRIS P1 BASIC19.25■□□□□ 0.67
Prom1O54990 Rcor1-201ENSMUST00000084968 5684 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
Prom1O54990 Nrxn2-205ENSMUST00000113462 6667 ntAPPRIS P4 TSL 1 (best) BASIC19.25■□□□□ 0.67
Prom1O54990 Hpn-202ENSMUST00000108102 1830 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Prom1O54990 Hhat-203ENSMUST00000128619 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
Prom1O54990 BC029722-201ENSMUST00000124586 1615 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Prom1O54990 Cacng4-201ENSMUST00000021066 3500 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Prom1O54990 Hes6-201ENSMUST00000086851 1335 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Prom1O54990 Wnt6-201ENSMUST00000006716 2071 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Prom1O54990 Nmnat3-202ENSMUST00000112937 1898 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Prom1O54990 Tia1-203ENSMUST00000095754 1789 ntAPPRIS ALT1 TSL 5 BASIC19.24■□□□□ 0.67
Prom1O54990 Dbnl-203ENSMUST00000109845 2001 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
Prom1O54990 Atf6b-201ENSMUST00000015605 2566 ntAPPRIS P2 TSL 1 (best) BASIC19.24■□□□□ 0.67
Prom1O54990 1700024G13Rik-201ENSMUST00000100723 850 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Prom1O54990 Gm9013-201ENSMUST00000132939 882 ntBASIC19.24■□□□□ 0.67
Prom1O54990 Gm45631-201ENSMUST00000210318 1244 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Prom1O54990 Rpl18a-206ENSMUST00000212709 700 ntTSL 2 BASIC19.24■□□□□ 0.67
Prom1O54990 Mrpl14-201ENSMUST00000024734 645 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Prom1O54990 Krt15-201ENSMUST00000107411 1700 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Prom1O54990 Wdsub1-201ENSMUST00000028368 2072 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Prom1O54990 Chtop-204ENSMUST00000107342 2411 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Prom1O54990 Shc3-201ENSMUST00000021898 1537 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Prom1O54990 Pgrmc1-201ENSMUST00000073339 1857 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Retrieved 100 of 76,532 protein–RNA pairs in 20.9 ms