Protein–RNA interactions for Protein: O54982

Kcnu1, Potassium channel subfamily U member 1, mousemouse

Predictions only

Length 1,121 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Kcnu1O54982 Hrh3-202ENSMUST00000163215 1401 ntTSL 5 BASIC18.63■□□□□ 0.57
Kcnu1O54982 Msx2-201ENSMUST00000021922 2453 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Kcnu1O54982 Amacr-201ENSMUST00000070877 2577 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Kcnu1O54982 Hnrnpul2-201ENSMUST00000096753 5726 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Kcnu1O54982 Elac2-202ENSMUST00000101049 2884 ntAPPRIS ALT2 TSL 5 BASIC18.63■□□□□ 0.57
Kcnu1O54982 Tmem125-201ENSMUST00000060214 1864 ntAPPRIS P1 TSL 2 BASIC18.63■□□□□ 0.57
Kcnu1O54982 Asap2-202ENSMUST00000064595 5678 ntAPPRIS P4 TSL 5 BASIC18.63■□□□□ 0.57
Kcnu1O54982 Ppp1r1b-201ENSMUST00000078694 2001 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Kcnu1O54982 Trip10-205ENSMUST00000224885 2136 ntAPPRIS ALT2 BASIC18.62■□□□□ 0.57
Kcnu1O54982 Atxn7l2-204ENSMUST00000119650 2274 ntTSL 5 BASIC18.62■□□□□ 0.57
Kcnu1O54982 2210016L21Rik-201ENSMUST00000031538 2607 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Kcnu1O54982 Gm12441-201ENSMUST00000121806 588 ntBASIC18.62■□□□□ 0.57
Kcnu1O54982 Mrps18a-202ENSMUST00000123646 621 ntTSL 2 BASIC18.62■□□□□ 0.57
Kcnu1O54982 Gm16764-202ENSMUST00000148931 433 ntTSL 5 BASIC18.62■□□□□ 0.57
Kcnu1O54982 Clybl-201ENSMUST00000026625 1231 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Kcnu1O54982 Hmga1-202ENSMUST00000117254 1328 ntAPPRIS P3 TSL 2 BASIC18.62■□□□□ 0.57
Kcnu1O54982 Tnfsf13-201ENSMUST00000018896 1407 ntAPPRIS P2 TSL 1 (best) BASIC18.62■□□□□ 0.57
Kcnu1O54982 Ntng1-207ENSMUST00000131027 1485 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Kcnu1O54982 Ntng1-209ENSMUST00000138344 1452 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Kcnu1O54982 Ssu72-201ENSMUST00000030905 1472 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Kcnu1O54982 Klc3-202ENSMUST00000108457 1632 ntAPPRIS P1 TSL 5 BASIC18.62■□□□□ 0.57
Kcnu1O54982 Gls-204ENSMUST00000114513 4966 ntAPPRIS P3 TSL 5 BASIC18.62■□□□□ 0.57
Kcnu1O54982 A130014A01Rik-201ENSMUST00000183021 2323 ntBASIC18.62■□□□□ 0.57
Kcnu1O54982 Klhdc8b-210ENSMUST00000193895 2718 ntAPPRIS P1 TSL 5 BASIC18.62■□□□□ 0.57
Kcnu1O54982 Piezo2-201ENSMUST00000046860 2849 ntTSL 5 BASIC18.61■□□□□ 0.57
Kcnu1O54982 Nipsnap3b-201ENSMUST00000015391 1552 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Kcnu1O54982 Zbtb5-204ENSMUST00000180217 4708 ntAPPRIS P1 TSL 2 BASIC18.61■□□□□ 0.57
Kcnu1O54982 K230015D01Rik-201ENSMUST00000211969 1516 ntBASIC18.61■□□□□ 0.57
Kcnu1O54982 Gm6576-201ENSMUST00000169678 883 ntBASIC18.61■□□□□ 0.57
Kcnu1O54982 AA465934-203ENSMUST00000177150 383 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Kcnu1O54982 4930554G22Rik-201ENSMUST00000196102 686 ntBASIC18.61■□□□□ 0.57
Kcnu1O54982 Gm45337-201ENSMUST00000210537 1267 ntAPPRIS P1 BASIC18.61■□□□□ 0.57
Kcnu1O54982 Rpl38-202ENSMUST00000082092 345 ntAPPRIS P1 TSL 2 BASIC18.61■□□□□ 0.57
Kcnu1O54982 Fam46a-202ENSMUST00000187711 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
Kcnu1O54982 Ankra2-203ENSMUST00000123924 2328 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Kcnu1O54982 Slc25a31-201ENSMUST00000091184 2128 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Kcnu1O54982 Nr1d2-201ENSMUST00000090543 4663 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Kcnu1O54982 Tspan5-201ENSMUST00000029800 6653 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Kcnu1O54982 Epha10-201ENSMUST00000059343 2544 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Kcnu1O54982 Zcchc4-203ENSMUST00000113904 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
Kcnu1O54982 Slc35e1-202ENSMUST00000152080 4383 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Kcnu1O54982 Acot7-203ENSMUST00000105652 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
Kcnu1O54982 Metrn-202ENSMUST00000165838 1363 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Kcnu1O54982 Cyp4f14-202ENSMUST00000179434 2207 ntAPPRIS P1 TSL 5 BASIC18.6■□□□□ 0.57
Kcnu1O54982 Cyp4f14-201ENSMUST00000054174 2207 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Kcnu1O54982 Ulk2-201ENSMUST00000004920 5743 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Kcnu1O54982 Gm12527-201ENSMUST00000117967 564 ntBASIC18.6■□□□□ 0.57
Kcnu1O54982 Gm13158-201ENSMUST00000122007 736 ntBASIC18.6■□□□□ 0.57
Kcnu1O54982 Fam50b-201ENSMUST00000039605 1229 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Kcnu1O54982 Zbtb24-201ENSMUST00000080771 2844 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Kcnu1O54982 Caskin1-201ENSMUST00000024958 6172 ntAPPRIS P1 TSL 5 BASIC18.6■□□□□ 0.57
Kcnu1O54982 4930432B10Rik-202ENSMUST00000181330 1612 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Kcnu1O54982 Aspscr1-205ENSMUST00000106160 1550 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Kcnu1O54982 Tmtc4-209ENSMUST00000148661 2719 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Kcnu1O54982 1600012H06Rik-203ENSMUST00000174004 1466 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Kcnu1O54982 2810408A11Rik-201ENSMUST00000018714 1485 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
Kcnu1O54982 Sdsl-201ENSMUST00000031594 1476 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Kcnu1O54982 Glmn-201ENSMUST00000078021 2015 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Kcnu1O54982 Nanp-201ENSMUST00000066640 1394 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Kcnu1O54982 Ghrhr-202ENSMUST00000203241 1328 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Kcnu1O54982 Donson-201ENSMUST00000023682 2360 ntAPPRIS P2 TSL 1 (best) BASIC18.59■□□□□ 0.57
Kcnu1O54982 Gm12473-201ENSMUST00000137535 579 ntTSL 5 BASIC18.59■□□□□ 0.57
Kcnu1O54982 Spr-202ENSMUST00000174286 775 ntTSL 2 BASIC18.59■□□□□ 0.57
Kcnu1O54982 Flywch2-201ENSMUST00000024704 694 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Kcnu1O54982 Ttyh3-202ENSMUST00000197452 4576 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Kcnu1O54982 D730003I15Rik-202ENSMUST00000194375 1667 ntBASIC18.59■□□□□ 0.57
Kcnu1O54982 Snx15-201ENSMUST00000025702 1635 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Kcnu1O54982 Cd47-201ENSMUST00000084838 5277 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Kcnu1O54982 Mtcp1-201ENSMUST00000033542 1592 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Kcnu1O54982 Nrl-202ENSMUST00000111404 2422 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Kcnu1O54982 Cdipt-201ENSMUST00000032920 1974 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Kcnu1O54982 Pex6-201ENSMUST00000002840 3200 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Kcnu1O54982 Tmem121b-201ENSMUST00000178687 4869 ntAPPRIS P1 BASIC18.58■□□□□ 0.57
Kcnu1O54982 Dcps-202ENSMUST00000119847 1445 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
Kcnu1O54982 Mboat4-201ENSMUST00000095345 1836 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Kcnu1O54982 Fam57b-207ENSMUST00000207020 1777 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
Kcnu1O54982 Acss2-202ENSMUST00000065973 2876 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
Kcnu1O54982 4732440D04Rik-203ENSMUST00000191825 5428 ntBASIC18.58■□□□□ 0.57
Kcnu1O54982 3110082J24Rik-201ENSMUST00000127749 327 ntAPPRIS P1 TSL 5 BASIC18.58■□□□□ 0.56
Kcnu1O54982 Klf13-202ENSMUST00000183817 599 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
Kcnu1O54982 Gm42545-201ENSMUST00000202755 922 ntBASIC18.58■□□□□ 0.56
Kcnu1O54982 H2-Eb1-201ENSMUST00000074557 1184 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Kcnu1O54982 Igsf11-201ENSMUST00000023478 3443 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Kcnu1O54982 Cdca3-201ENSMUST00000024270 1976 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Kcnu1O54982 Eml2-203ENSMUST00000120595 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.56
Kcnu1O54982 Trim24-201ENSMUST00000031859 4042 ntAPPRIS P3 TSL 1 (best) BASIC18.58■□□□□ 0.56
Kcnu1O54982 Soga1-201ENSMUST00000069098 7864 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Kcnu1O54982 Nsmf-201ENSMUST00000006646 2922 ntAPPRIS P3 TSL 1 (best) BASIC18.58■□□□□ 0.56
Kcnu1O54982 Gjb3-201ENSMUST00000046532 1880 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Kcnu1O54982 Mbip-201ENSMUST00000021416 1512 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Kcnu1O54982 Tspan4-201ENSMUST00000026585 1466 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Kcnu1O54982 Sapcd2-202ENSMUST00000100323 1761 ntAPPRIS ALT2 TSL 2 BASIC18.58■□□□□ 0.56
Kcnu1O54982 Lonp1-201ENSMUST00000047226 2963 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Kcnu1O54982 F12-201ENSMUST00000021948 1960 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Kcnu1O54982 Phldb3-201ENSMUST00000073325 2273 ntAPPRIS P1 TSL 5 BASIC18.57■□□□□ 0.56
Kcnu1O54982 Parg-208ENSMUST00000170840 2894 ntAPPRIS ALT2 TSL 5 BASIC18.57■□□□□ 0.56
Kcnu1O54982 Hmgxb3-201ENSMUST00000091884 5101 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Kcnu1O54982 AC166341.7-201ENSMUST00000221698 126 ntBASIC18.57■□□□□ 0.56
Kcnu1O54982 Gm18025-201ENSMUST00000221733 862 ntBASIC18.57■□□□□ 0.56
Kcnu1O54982 Dlgap1-206ENSMUST00000133717 2355 ntAPPRIS ALT2 TSL 5 BASIC18.57■□□□□ 0.56
Retrieved 100 of 76,532 protein–RNA pairs in 30.5 ms