Protein–RNA interactions for Protein: O54942

Cldn5, Claudin-5, mousemouse

Predictions only

Length 218 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cldn5O54942 Map1lc3b-204ENSMUST00000181826 2633 ntBASIC18.16■□□□□ 0.5
Cldn5O54942 Ablim1-204ENSMUST00000111524 1251 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Cldn5O54942 Gm7638-201ENSMUST00000121348 967 ntBASIC18.16■□□□□ 0.5
Cldn5O54942 AC124601.2-201ENSMUST00000222888 759 ntTSL 2 BASIC18.16■□□□□ 0.5
Cldn5O54942 Spata2l-202ENSMUST00000166768 2707 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Cldn5O54942 Mag-207ENSMUST00000191081 2007 ntAPPRIS ALT1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Cldn5O54942 Gm6093-201ENSMUST00000221792 1623 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Cldn5O54942 Dtnb-222ENSMUST00000174479 3689 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Cldn5O54942 Adam15-203ENSMUST00000107446 1686 ntTSL 5 BASIC18.15■□□□□ 0.5
Cldn5O54942 Gas1-201ENSMUST00000065086 2961 ntAPPRIS ALT2 BASIC18.15■□□□□ 0.5
Cldn5O54942 Aig1-201ENSMUST00000019942 1439 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Cldn5O54942 Csf3-201ENSMUST00000038886 1413 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Cldn5O54942 Rrbp1-202ENSMUST00000037875 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
Cldn5O54942 Meox1-201ENSMUST00000057054 2228 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Cldn5O54942 Ubtf-204ENSMUST00000107117 3258 ntAPPRIS ALT2 TSL 5 BASIC18.15■□□□□ 0.5
Cldn5O54942 Camsap3-212ENSMUST00000208240 2572 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Cldn5O54942 Vangl2-203ENSMUST00000111264 2349 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Cldn5O54942 Zbtb7a-201ENSMUST00000048128 5938 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Cldn5O54942 Tbc1d2b-202ENSMUST00000128874 3473 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Cldn5O54942 Snrnp48-202ENSMUST00000178564 847 ntTSL 5 BASIC18.15■□□□□ 0.5
Cldn5O54942 Gm10231-201ENSMUST00000181584 441 ntBASIC18.15■□□□□ 0.5
Cldn5O54942 Atp5g2-202ENSMUST00000185641 731 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Cldn5O54942 4732471J01Rik-202ENSMUST00000205787 991 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Cldn5O54942 Gm10175-202ENSMUST00000208752 441 ntBASIC18.15■□□□□ 0.5
Cldn5O54942 Krt88-201ENSMUST00000023781 903 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Cldn5O54942 Atp5g2-201ENSMUST00000075630 441 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Cldn5O54942 Pdx1-201ENSMUST00000085591 2158 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Cldn5O54942 Clint1-202ENSMUST00000109261 3365 ntAPPRIS ALT2 TSL 5 BASIC18.15■□□□□ 0.5
Cldn5O54942 Ggt6-202ENSMUST00000100903 1387 ntTSL 5 BASIC18.15■□□□□ 0.5
Cldn5O54942 Tspan9-201ENSMUST00000032503 1405 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Cldn5O54942 Nkd1-201ENSMUST00000034086 3035 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Cldn5O54942 Satb1-211ENSMUST00000152830 5993 ntAPPRIS P2 TSL 2 BASIC18.14■□□□□ 0.49
Cldn5O54942 Prdm6-203ENSMUST00000115399 2227 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
Cldn5O54942 Gm42939-201ENSMUST00000197514 2205 ntBASIC18.14■□□□□ 0.49
Cldn5O54942 Khdrbs2-201ENSMUST00000027226 2281 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Cldn5O54942 Gm16712-201ENSMUST00000181962 1960 ntTSL 2 BASIC18.14■□□□□ 0.49
Cldn5O54942 Pacsin1-203ENSMUST00000114872 1647 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Cldn5O54942 Izumo1r-204ENSMUST00000121116 726 ntTSL 2 BASIC18.14■□□□□ 0.49
Cldn5O54942 2210408F21Rik-208ENSMUST00000144612 450 ntTSL 3 BASIC18.14■□□□□ 0.49
Cldn5O54942 Gm27463-201ENSMUST00000183569 57 ntBASIC18.14■□□□□ 0.49
Cldn5O54942 Rab28-205ENSMUST00000202913 863 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Cldn5O54942 Cnih3-204ENSMUST00000209607 564 ntTSL 5 BASIC18.14■□□□□ 0.49
Cldn5O54942 Prok1-201ENSMUST00000049852 813 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Cldn5O54942 Smim15-205ENSMUST00000225972 2097 ntAPPRIS P1 BASIC18.14■□□□□ 0.49
Cldn5O54942 Ets1-206ENSMUST00000184887 2107 ntTSL 5 BASIC18.14■□□□□ 0.49
Cldn5O54942 Zdhhc16-201ENSMUST00000026154 1821 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Cldn5O54942 Agbl4-205ENSMUST00000106591 1406 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
Cldn5O54942 Paqr7-201ENSMUST00000081525 2351 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Cldn5O54942 Tmie-201ENSMUST00000050958 2802 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Cldn5O54942 Lmbr1-207ENSMUST00000200564 1598 ntTSL 5 BASIC18.13■□□□□ 0.49
Cldn5O54942 Fmnl2-203ENSMUST00000090952 5414 ntAPPRIS P1 TSL 5 BASIC18.13■□□□□ 0.49
Cldn5O54942 Nmnat3-203ENSMUST00000112938 848 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Cldn5O54942 Gm4217-201ENSMUST00000182243 1002 ntBASIC18.13■□□□□ 0.49
Cldn5O54942 Fuz-209ENSMUST00000208179 1164 ntTSL 5 BASIC18.13■□□□□ 0.49
Cldn5O54942 Stk11-210ENSMUST00000213772 1239 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
Cldn5O54942 Dcxr-201ENSMUST00000026144 892 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Cldn5O54942 Ripply2-201ENSMUST00000058846 503 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Cldn5O54942 Ctbp2-201ENSMUST00000033269 2321 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Cldn5O54942 A930001A20Rik-201ENSMUST00000182586 1366 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Cldn5O54942 Racgap1-213ENSMUST00000171702 3052 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Cldn5O54942 Agpat3-201ENSMUST00000001240 5980 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Cldn5O54942 Lysmd4-209ENSMUST00000208998 2110 ntAPPRIS P2 TSL 1 (best) BASIC18.13■□□□□ 0.49
Cldn5O54942 A530016L24Rik-202ENSMUST00000223266 1547 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Cldn5O54942 Atp6v1g2-201ENSMUST00000068261 1528 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Cldn5O54942 Epc2-201ENSMUST00000092123 4697 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Cldn5O54942 Dnajb9-201ENSMUST00000015049 2461 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Cldn5O54942 Nrxn2-203ENSMUST00000113459 3285 ntTSL 2 BASIC18.12■□□□□ 0.49
Cldn5O54942 Tfeb-203ENSMUST00000113284 1974 ntTSL 5 BASIC18.12■□□□□ 0.49
Cldn5O54942 Zfp219-204ENSMUST00000226522 2804 ntAPPRIS P2 BASIC18.12■□□□□ 0.49
Cldn5O54942 Fez2-202ENSMUST00000112487 2020 ntAPPRIS ALT1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Cldn5O54942 Ptf1aos-201ENSMUST00000122978 916 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Cldn5O54942 4833413E03Rik-201ENSMUST00000013706 1091 ntTSL 5 BASIC18.12■□□□□ 0.49
Cldn5O54942 AC159205.6-201ENSMUST00000224935 887 ntBASIC18.12■□□□□ 0.49
Cldn5O54942 AC121577.1-201ENSMUST00000227302 707 ntBASIC18.12■□□□□ 0.49
Cldn5O54942 Cdh4-201ENSMUST00000000314 6388 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Cldn5O54942 Gng11-201ENSMUST00000031670 919 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Cldn5O54942 Alkbh5-201ENSMUST00000044250 5730 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Cldn5O54942 Caskin1-201ENSMUST00000024958 6172 ntAPPRIS P1 TSL 5 BASIC18.12■□□□□ 0.49
Cldn5O54942 Adat2-201ENSMUST00000019944 1466 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Cldn5O54942 Hoxb2-201ENSMUST00000100523 1628 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Cldn5O54942 Tgds-201ENSMUST00000022727 1682 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Cldn5O54942 Ptpra-201ENSMUST00000028769 3227 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Cldn5O54942 Lrp5-202ENSMUST00000176867 2759 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Cldn5O54942 Vhl-201ENSMUST00000035673 2792 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Cldn5O54942 Wnk2-205ENSMUST00000110097 6882 ntAPPRIS ALT2 TSL 5 BASIC18.11■□□□□ 0.49
Cldn5O54942 Wnk2-203ENSMUST00000091623 6897 ntAPPRIS P4 TSL 5 BASIC18.11■□□□□ 0.49
Cldn5O54942 Gab1-202ENSMUST00000210676 4985 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Cldn5O54942 Osbpl1a-207ENSMUST00000121808 3030 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Cldn5O54942 Tmc6-202ENSMUST00000103025 1279 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Cldn5O54942 Gm16731-201ENSMUST00000132432 922 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Cldn5O54942 Ccl27a-219ENSMUST00000173865 657 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Cldn5O54942 4930579K19Rik-202ENSMUST00000190541 632 ntTSL 2 BASIC18.11■□□□□ 0.49
Cldn5O54942 Rpl18a-206ENSMUST00000212709 700 ntTSL 2 BASIC18.11■□□□□ 0.49
Cldn5O54942 Gm7791-201ENSMUST00000219066 539 ntBASIC18.11■□□□□ 0.49
Cldn5O54942 Gm32151-201ENSMUST00000223521 915 ntTSL 5 BASIC18.11■□□□□ 0.49
Cldn5O54942 Alg5-201ENSMUST00000044567 1471 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Cldn5O54942 Txnl4b-201ENSMUST00000034159 1890 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Cldn5O54942 Polr2m-202ENSMUST00000163972 2138 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Cldn5O54942 Hikeshi-206ENSMUST00000153470 2224 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Cldn5O54942 Zfp697-201ENSMUST00000056096 5166 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Retrieved 100 of 76,532 protein–RNA pairs in 47.1 ms