Protein–RNA interactions for Protein: O35627

Nr1i3, Nuclear receptor subfamily 1 group I member 3, mousemouse

Predictions only

Length 358 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nr1i3O35627 Aspscr1-204ENSMUST00000106159 1615 ntTSL 5 BASIC18.81■□□□□ 0.6
Nr1i3O35627 Ssfa2-203ENSMUST00000111788 4976 ntAPPRIS ALT2 TSL 5 BASIC18.81■□□□□ 0.6
Nr1i3O35627 Grk6-201ENSMUST00000001115 2994 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Nr1i3O35627 Bcat2-201ENSMUST00000033098 1772 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Nr1i3O35627 Cox18-201ENSMUST00000048363 1333 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
Nr1i3O35627 Ccni-201ENSMUST00000058550 2804 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Nr1i3O35627 Zfyve19-201ENSMUST00000090174 2008 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Nr1i3O35627 4921536K21Rik-201ENSMUST00000020712 2590 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Nr1i3O35627 Smim1-209ENSMUST00000145527 562 ntAPPRIS P1 TSL 2 BASIC18.8■□□□□ 0.6
Nr1i3O35627 Gm34933-201ENSMUST00000203245 1067 ntTSL 5 BASIC18.8■□□□□ 0.6
Nr1i3O35627 Mrps10-201ENSMUST00000060752 1109 ntTSL 5 BASIC18.8■□□□□ 0.6
Nr1i3O35627 Fcrlb-201ENSMUST00000094337 1284 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Nr1i3O35627 Ptpre-201ENSMUST00000073961 5410 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
Nr1i3O35627 Kcnab3-201ENSMUST00000018614 2538 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Nr1i3O35627 Vangl2-203ENSMUST00000111264 2349 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Nr1i3O35627 Nipsnap3b-201ENSMUST00000015391 1552 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Nr1i3O35627 Ntrk1-201ENSMUST00000029712 2588 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Nr1i3O35627 Yipf2-202ENSMUST00000078572 1894 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Nr1i3O35627 Arhgap8-201ENSMUST00000006029 1527 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
Nr1i3O35627 Cdipt-201ENSMUST00000032920 1974 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Nr1i3O35627 Adgrl1-207ENSMUST00000141158 8181 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Nr1i3O35627 Slc2a8-201ENSMUST00000028129 2108 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Nr1i3O35627 Atad3a-201ENSMUST00000030903 2413 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Nr1i3O35627 1110065P20Rik-203ENSMUST00000137769 659 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Nr1i3O35627 Sco2-201ENSMUST00000167643 1143 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Nr1i3O35627 Cbx2-201ENSMUST00000026662 3807 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Nr1i3O35627 Rapgef3-207ENSMUST00000134885 1422 ntTSL 5 BASIC18.79■□□□□ 0.6
Nr1i3O35627 Sh3bp1-201ENSMUST00000001226 2510 ntTSL 5 BASIC18.79■□□□□ 0.6
Nr1i3O35627 Rbbp7-203ENSMUST00000112327 1862 ntTSL 5 BASIC18.79■□□□□ 0.6
Nr1i3O35627 Card10-203ENSMUST00000170584 3220 ntAPPRIS ALT2 TSL 5 BASIC18.79■□□□□ 0.6
Nr1i3O35627 Sh3gl2-203ENSMUST00000107188 2286 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Nr1i3O35627 Vmn1r17-201ENSMUST00000227186 2234 ntAPPRIS P2 BASIC18.78■□□□□ 0.6
Nr1i3O35627 4833418N02Rik-202ENSMUST00000146560 1495 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Nr1i3O35627 Auh-202ENSMUST00000110031 3235 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Nr1i3O35627 Tbc1d9-202ENSMUST00000093393 5334 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Nr1i3O35627 Alkbh1-212ENSMUST00000185301 408 ntBASIC18.78■□□□□ 0.6
Nr1i3O35627 Gm30085-201ENSMUST00000209694 594 ntTSL 3 BASIC18.78■□□□□ 0.6
Nr1i3O35627 Gm36033-202ENSMUST00000214827 745 ntTSL 2 BASIC18.78■□□□□ 0.6
Nr1i3O35627 Tbc1d7-201ENSMUST00000021797 1239 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Nr1i3O35627 Sft2d2-201ENSMUST00000043338 5535 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Nr1i3O35627 Rps16-201ENSMUST00000082134 1109 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Nr1i3O35627 Mark3-202ENSMUST00000084953 3365 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Nr1i3O35627 Myb-201ENSMUST00000020158 3074 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
Nr1i3O35627 Med18-201ENSMUST00000102567 1675 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Nr1i3O35627 Gm19721-201ENSMUST00000195284 1764 ntBASIC18.78■□□□□ 0.6
Nr1i3O35627 Slc26a10-205ENSMUST00000222911 3067 ntAPPRIS ALT2 TSL 5 BASIC18.77■□□□□ 0.6
Nr1i3O35627 Gm21596-201ENSMUST00000178049 1316 ntBASIC18.77■□□□□ 0.6
Nr1i3O35627 4430402I18Rik-205ENSMUST00000162110 1559 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.6
Nr1i3O35627 Otud5-201ENSMUST00000033494 4259 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.6
Nr1i3O35627 Col15a1-202ENSMUST00000102917 5172 ntAPPRIS P2 TSL 1 (best) BASIC18.77■□□□□ 0.6
Nr1i3O35627 Ppan-201ENSMUST00000004203 1670 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Nr1i3O35627 Gm6270-201ENSMUST00000132731 559 ntTSL 5 BASIC18.77■□□□□ 0.6
Nr1i3O35627 Gm6576-201ENSMUST00000169678 883 ntBASIC18.77■□□□□ 0.6
Nr1i3O35627 Mrpl52-204ENSMUST00000199195 463 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Nr1i3O35627 1110004E09Rik-201ENSMUST00000023694 1143 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Nr1i3O35627 Grp-201ENSMUST00000025395 862 ntAPPRIS P2 TSL 1 (best) BASIC18.77■□□□□ 0.6
Nr1i3O35627 Ypel1-202ENSMUST00000090199 631 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Nr1i3O35627 Snrnp48-201ENSMUST00000091641 1785 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Nr1i3O35627 Zscan25-201ENSMUST00000094116 1796 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Nr1i3O35627 Ddhd2-206ENSMUST00000211688 2265 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Nr1i3O35627 Dlgap1-206ENSMUST00000133717 2355 ntAPPRIS ALT2 TSL 5 BASIC18.77■□□□□ 0.6
Nr1i3O35627 P2ry1-203ENSMUST00000193943 2203 ntAPPRIS P1 BASIC18.77■□□□□ 0.59
Nr1i3O35627 Tbxas1-201ENSMUST00000003017 1990 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
Nr1i3O35627 Gm45560-201ENSMUST00000211492 1472 ntBASIC18.77■□□□□ 0.59
Nr1i3O35627 Ankrd9-202ENSMUST00000128353 2577 ntAPPRIS P2 TSL 1 (best) BASIC18.77■□□□□ 0.59
Nr1i3O35627 Acss2-201ENSMUST00000029135 2931 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
Nr1i3O35627 Vkorc1l1-203ENSMUST00000201855 4809 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Nr1i3O35627 Pick1-206ENSMUST00000166155 1699 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Nr1i3O35627 Fiz1-203ENSMUST00000167804 2637 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Nr1i3O35627 Tia1-203ENSMUST00000095754 1789 ntAPPRIS ALT1 TSL 5 BASIC18.76■□□□□ 0.59
Nr1i3O35627 Nfib-204ENSMUST00000107246 3075 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Nr1i3O35627 Gm9954-202ENSMUST00000198686 4725 ntBASIC18.76■□□□□ 0.59
Nr1i3O35627 Vgf-201ENSMUST00000041543 2553 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Nr1i3O35627 Sh3yl1-202ENSMUST00000110880 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
Nr1i3O35627 Prcd-201ENSMUST00000106381 724 ntTSL 3 BASIC18.76■□□□□ 0.59
Nr1i3O35627 Gm5901-201ENSMUST00000106805 1140 ntAPPRIS P1 TSL 5 BASIC18.76■□□□□ 0.59
Nr1i3O35627 AC163280.1-201ENSMUST00000228194 1100 ntBASIC18.76■□□□□ 0.59
Nr1i3O35627 Hist1h2ap-201ENSMUST00000081342 482 ntAPPRIS P1 BASIC18.76■□□□□ 0.59
Nr1i3O35627 March8-202ENSMUST00000101032 4611 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Nr1i3O35627 Irgc1-204ENSMUST00000205776 1835 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Nr1i3O35627 Ssu72-201ENSMUST00000030905 1472 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Nr1i3O35627 Gm38534-201ENSMUST00000206566 1909 ntTSL 5 BASIC18.76■□□□□ 0.59
Nr1i3O35627 Gm26548-201ENSMUST00000181165 2029 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Nr1i3O35627 Lrriq4-203ENSMUST00000172350 1797 ntAPPRIS P3 TSL 5 BASIC18.76■□□□□ 0.59
Nr1i3O35627 Cpeb2-204ENSMUST00000166713 6846 ntAPPRIS ALT2 TSL 5 BASIC18.75■□□□□ 0.59
Nr1i3O35627 Eepd1-201ENSMUST00000040677 2723 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Nr1i3O35627 Pdgfa-201ENSMUST00000046901 1543 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Nr1i3O35627 Zxdc-203ENSMUST00000113539 4864 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
Nr1i3O35627 Gprc5c-203ENSMUST00000122967 1709 ntTSL 5 BASIC18.75■□□□□ 0.59
Nr1i3O35627 Ak5-201ENSMUST00000045262 3323 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Nr1i3O35627 Iqsec2-207ENSMUST00000168786 5993 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
Nr1i3O35627 1110004F10Rik-202ENSMUST00000106607 1153 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Nr1i3O35627 Gm11249-201ENSMUST00000117071 859 ntBASIC18.75■□□□□ 0.59
Nr1i3O35627 Dsg2-203ENSMUST00000121837 953 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Nr1i3O35627 4930554G22Rik-201ENSMUST00000196102 686 ntBASIC18.75■□□□□ 0.59
Nr1i3O35627 Tspan2-203ENSMUST00000196611 682 ntTSL 5 BASIC18.75■□□□□ 0.59
Nr1i3O35627 Ltb-201ENSMUST00000025262 1160 ntAPPRIS P2 TSL 1 (best) BASIC18.75■□□□□ 0.59
Nr1i3O35627 Fiz1-208ENSMUST00000208944 2306 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Nr1i3O35627 Gm16401-202ENSMUST00000197463 2074 ntBASIC18.75■□□□□ 0.59
Nr1i3O35627 Lrig1-201ENSMUST00000032105 4831 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Retrieved 100 of 76,532 protein–RNA pairs in 19.9 ms