Protein–RNA interactions for Protein: O35604

Npc1, Niemann-Pick C1 protein, mousemouse

Predictions only

Length 1,277 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Npc1O35604 Baiap2-202ENSMUST00000075180 3518 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Npc1O35604 3110043O21Rik-203ENSMUST00000108127 3193 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Npc1O35604 Pcdhac2-201ENSMUST00000047479 5888 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Npc1O35604 Ece2-202ENSMUST00000122306 2495 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Npc1O35604 Thumpd3-201ENSMUST00000032398 2163 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Npc1O35604 Mir5122-201ENSMUST00000175004 89 ntBASIC17.04■□□□□ 0.32
Npc1O35604 Mir6982-201ENSMUST00000184354 68 ntBASIC17.04■□□□□ 0.32
Npc1O35604 Gm37939-201ENSMUST00000192309 447 ntTSL 5 BASIC17.04■□□□□ 0.32
Npc1O35604 Uqcr11-201ENSMUST00000020372 445 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Npc1O35604 4932443I19Rik-204ENSMUST00000214337 1212 ntAPPRIS ALT2 TSL 5 BASIC17.04■□□□□ 0.32
Npc1O35604 Fgf8-202ENSMUST00000026241 1168 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Npc1O35604 Gm9803-201ENSMUST00000057649 563 ntAPPRIS P1 BASIC17.04■□□□□ 0.32
Npc1O35604 Glra1-201ENSMUST00000075603 2037 ntAPPRIS ALT1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Npc1O35604 Msl1-204ENSMUST00000107487 2836 ntAPPRIS ALT2 TSL 2 BASIC17.04■□□□□ 0.32
Npc1O35604 Slc16a3-201ENSMUST00000070653 2272 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Npc1O35604 Ythdc1-203ENSMUST00000120498 3269 ntAPPRIS ALT2 TSL 5 BASIC17.04■□□□□ 0.32
Npc1O35604 Gm10461-201ENSMUST00000202073 4786 ntBASIC17.03■□□□□ 0.32
Npc1O35604 Ndor1-202ENSMUST00000114349 2336 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Npc1O35604 U2af2-202ENSMUST00000165399 1810 ntTSL 5 BASIC17.03■□□□□ 0.32
Npc1O35604 Gpaa1-210ENSMUST00000172281 1809 ntTSL 5 BASIC17.03■□□□□ 0.32
Npc1O35604 Artn-202ENSMUST00000097913 1568 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Npc1O35604 Aatk-203ENSMUST00000103020 5687 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
Npc1O35604 Nrl-201ENSMUST00000062232 2504 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Npc1O35604 Rasl10b-204ENSMUST00000175848 3249 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Npc1O35604 Apbb1-209ENSMUST00000188368 1970 ntTSL 5 BASIC17.03■□□□□ 0.32
Npc1O35604 Rint1-204ENSMUST00000117783 560 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Npc1O35604 B430219N15Rik-201ENSMUST00000147230 835 ntTSL 2 BASIC17.03■□□□□ 0.32
Npc1O35604 Cxxc4-201ENSMUST00000166288 1290 ntAPPRIS ALT2 TSL 5 BASIC17.03■□□□□ 0.32
Npc1O35604 Gm3764-202ENSMUST00000180582 440 ntTSL 5 BASIC17.03■□□□□ 0.32
Npc1O35604 Odf3b-204ENSMUST00000227834 930 ntBASIC17.03■□□□□ 0.32
Npc1O35604 Myrip-201ENSMUST00000048121 4906 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Npc1O35604 Scamp3-201ENSMUST00000029684 1489 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
Npc1O35604 Sri-205ENSMUST00000148633 2251 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Npc1O35604 Noxa1-201ENSMUST00000044018 1617 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
Npc1O35604 Btnl9-201ENSMUST00000046522 5273 ntAPPRIS P2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Npc1O35604 Pdxdc1-202ENSMUST00000115802 2466 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Npc1O35604 Arrb2-203ENSMUST00000102563 1352 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Npc1O35604 Tekt1-203ENSMUST00000108503 1397 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Npc1O35604 Diras1-201ENSMUST00000055125 2953 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Npc1O35604 Rnf112-202ENSMUST00000060255 3161 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
Npc1O35604 Nf2-205ENSMUST00000109910 4720 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.32
Npc1O35604 Smim14-202ENSMUST00000121661 1056 ntAPPRIS P1 TSL 3 BASIC17.02■□□□□ 0.32
Npc1O35604 Phgr1-202ENSMUST00000130293 542 ntAPPRIS P2 TSL 5 BASIC17.02■□□□□ 0.32
Npc1O35604 Aldh1a3-204ENSMUST00000174215 1066 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
Npc1O35604 Timm23-208ENSMUST00000226683 750 ntBASIC17.02■□□□□ 0.32
Npc1O35604 Gm10273-201ENSMUST00000092511 1126 ntAPPRIS P1 BASIC17.02■□□□□ 0.32
Npc1O35604 Vegfc-201ENSMUST00000033919 2449 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Npc1O35604 Sertad4-204ENSMUST00000155579 3350 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Npc1O35604 Hrh3-202ENSMUST00000163215 1401 ntTSL 5 BASIC17.02■□□□□ 0.31
Npc1O35604 Tnfsf13-201ENSMUST00000018896 1407 ntAPPRIS P2 TSL 1 (best) BASIC17.02■□□□□ 0.31
Npc1O35604 Vac14-201ENSMUST00000034190 3069 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Npc1O35604 Mfsd13a-201ENSMUST00000086969 2278 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Npc1O35604 Lat2-202ENSMUST00000077636 1717 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Npc1O35604 Ergic3-202ENSMUST00000088650 1349 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Npc1O35604 Pitx2-201ENSMUST00000029657 1680 ntTSL 5 BASIC17.01■□□□□ 0.31
Npc1O35604 Agfg2-202ENSMUST00000100544 2858 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
Npc1O35604 Eda-204ENSMUST00000113777 1056 ntTSL 5 BASIC17.01■□□□□ 0.31
Npc1O35604 2210408F21Rik-204ENSMUST00000136571 478 ntTSL 3 BASIC17.01■□□□□ 0.31
Npc1O35604 Gm3264-202ENSMUST00000166776 882 ntAPPRIS ALT2 TSL 5 BASIC17.01■□□□□ 0.31
Npc1O35604 Gm37055-201ENSMUST00000191866 133 ntBASIC17.01■□□□□ 0.31
Npc1O35604 Eda-201ENSMUST00000071453 1152 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Npc1O35604 Zfp943-202ENSMUST00000153985 1598 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Npc1O35604 Six3-203ENSMUST00000176081 3680 ntAPPRIS P2 TSL 1 (best) BASIC17.01■□□□□ 0.31
Npc1O35604 Lhx6-205ENSMUST00000112967 3378 ntTSL 1 (best) BASIC17■□□□□ 0.31
Npc1O35604 Polr1c-201ENSMUST00000087026 1314 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Npc1O35604 Rcn1-201ENSMUST00000006128 2720 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Npc1O35604 Xxylt1-201ENSMUST00000055389 2987 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Npc1O35604 Clta-203ENSMUST00000107847 1121 ntTSL 5 BASIC17■□□□□ 0.31
Npc1O35604 Gm12979-201ENSMUST00000145488 405 ntTSL 2 BASIC17■□□□□ 0.31
Npc1O35604 E030044B06Rik-201ENSMUST00000181195 1266 ntTSL 1 (best) BASIC17■□□□□ 0.31
Npc1O35604 Gm21814-202ENSMUST00000203277 873 ntBASIC17■□□□□ 0.31
Npc1O35604 Tmem14c-201ENSMUST00000021790 914 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Npc1O35604 Zfp119b-201ENSMUST00000056147 1889 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Npc1O35604 Lrig1-201ENSMUST00000032105 4831 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Npc1O35604 Ostm1-201ENSMUST00000040718 3006 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Npc1O35604 Cers1-202ENSMUST00000140239 2711 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
Npc1O35604 Fbrsl1-206ENSMUST00000198834 2571 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
Npc1O35604 Cog2-201ENSMUST00000034460 2825 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Npc1O35604 Ctnnbip1-201ENSMUST00000030839 2674 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Npc1O35604 Chst1-201ENSMUST00000065797 2680 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Npc1O35604 Tfap2a-208ENSMUST00000224999 2058 ntAPPRIS ALT1 BASIC17■□□□□ 0.31
Npc1O35604 Gm20604-201ENSMUST00000174651 2795 ntAPPRIS P1 TSL 2 BASIC17■□□□□ 0.31
Npc1O35604 Ak5-201ENSMUST00000045262 3323 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Npc1O35604 Tmco4-202ENSMUST00000050949 3318 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Npc1O35604 Stox1-202ENSMUST00000133371 3510 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Npc1O35604 Elmo2-204ENSMUST00000103088 3052 ntAPPRIS ALT2 TSL 5 BASIC16.99■□□□□ 0.31
Npc1O35604 Ckap4-202ENSMUST00000167671 2606 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Npc1O35604 D330020A13Rik-201ENSMUST00000181956 1069 ntAPPRIS P1 BASIC16.99■□□□□ 0.31
Npc1O35604 AL672049.1-201ENSMUST00000197943 91 ntBASIC16.99■□□□□ 0.31
Npc1O35604 Gm16042-201ENSMUST00000204813 1247 ntBASIC16.99■□□□□ 0.31
Npc1O35604 AC156016.1-201ENSMUST00000227190 1035 ntBASIC16.99■□□□□ 0.31
Npc1O35604 Fam167b-201ENSMUST00000052835 913 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Npc1O35604 Coro7-202ENSMUST00000090480 1147 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Npc1O35604 Atp2c1-204ENSMUST00000112558 5642 ntAPPRIS P3 TSL 1 (best) BASIC16.99■□□□□ 0.31
Npc1O35604 Dock9-202ENSMUST00000100299 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
Npc1O35604 Atp2a2-201ENSMUST00000031423 4486 ntAPPRIS P4 TSL 1 (best) BASIC16.99■□□□□ 0.31
Npc1O35604 Lsm6-201ENSMUST00000051867 2107 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Npc1O35604 Tigd3-201ENSMUST00000055911 2114 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Npc1O35604 Cdv3-201ENSMUST00000035484 3387 ntAPPRIS P3 TSL 1 (best) BASIC16.98■□□□□ 0.31
Npc1O35604 Col4a3bp-201ENSMUST00000077672 2746 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Retrieved 100 of 76,532 protein–RNA pairs in 24.5 ms