Protein–RNA interactions for Protein: O35595

Ptch2, Protein patched homolog 2, mousemouse

Predictions only

Length 1,182 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ptch2O35595 Ptges3l-202ENSMUST00000103102 1463 ntAPPRIS P2 TSL 1 (best) BASIC17.9■□□□□ 0.46
Ptch2O35595 Kctd15-201ENSMUST00000032709 2480 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Ptch2O35595 Iqsec2-207ENSMUST00000168786 5993 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
Ptch2O35595 Mir142hg-201ENSMUST00000123700 269 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Ptch2O35595 Gm24841-201ENSMUST00000158676 357 ntBASIC17.9■□□□□ 0.46
Ptch2O35595 Cnih3-204ENSMUST00000209607 564 ntTSL 5 BASIC17.9■□□□□ 0.46
Ptch2O35595 Gm7791-201ENSMUST00000219066 539 ntBASIC17.9■□□□□ 0.46
Ptch2O35595 4930505A04Rik-201ENSMUST00000041763 904 ntAPPRIS P1 TSL 2 BASIC17.9■□□□□ 0.46
Ptch2O35595 Vps37d-202ENSMUST00000076203 1286 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Ptch2O35595 Zfp524-201ENSMUST00000086349 1142 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Ptch2O35595 Gm11549-201ENSMUST00000124606 2829 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Ptch2O35595 Cacnb3-201ENSMUST00000003442 2819 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Ptch2O35595 Ppp1r13b-201ENSMUST00000054815 4389 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Ptch2O35595 4930447C04Rik-201ENSMUST00000044000 2051 ntAPPRIS P2 TSL 1 (best) BASIC17.9■□□□□ 0.46
Ptch2O35595 BC017158-201ENSMUST00000033044 2627 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Ptch2O35595 Kcnb1-201ENSMUST00000059826 4015 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Ptch2O35595 Ythdf3-201ENSMUST00000108345 5102 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Ptch2O35595 Mrpl9-201ENSMUST00000029786 1612 ntAPPRIS P2 TSL 1 (best) BASIC17.9■□□□□ 0.46
Ptch2O35595 Pigu-201ENSMUST00000077626 1636 ntAPPRIS P2 TSL 1 (best) BASIC17.9■□□□□ 0.46
Ptch2O35595 Maneal-201ENSMUST00000064444 2727 ntAPPRIS P1 TSL 3 BASIC17.9■□□□□ 0.46
Ptch2O35595 Ggt6-202ENSMUST00000100903 1387 ntTSL 5 BASIC17.9■□□□□ 0.46
Ptch2O35595 Gm9774-202ENSMUST00000192538 1392 ntAPPRIS P1 BASIC17.9■□□□□ 0.46
Ptch2O35595 Irgq-201ENSMUST00000049020 6083 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Ptch2O35595 Csf3-201ENSMUST00000038886 1413 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.46
Ptch2O35595 Wisp2-201ENSMUST00000029188 1719 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.46
Ptch2O35595 Itm2c-203ENSMUST00000185569 1465 ntTSL 5 BASIC17.89■□□□□ 0.45
Ptch2O35595 9330171B17Rik-201ENSMUST00000035939 2073 ntBASIC17.89■□□□□ 0.45
Ptch2O35595 Hist1h2bf-201ENSMUST00000105106 461 ntAPPRIS P1 BASIC17.89■□□□□ 0.45
Ptch2O35595 4930544I03Rik-201ENSMUST00000181184 1276 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
Ptch2O35595 Gm45442-201ENSMUST00000210038 411 ntTSL 3 BASIC17.89■□□□□ 0.45
Ptch2O35595 Cnn1-203ENSMUST00000214601 1225 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
Ptch2O35595 4930465K10Rik-201ENSMUST00000056675 1238 ntBASIC17.89■□□□□ 0.45
Ptch2O35595 Aire-204ENSMUST00000128241 1938 ntAPPRIS P3 TSL 1 (best) BASIC17.89■□□□□ 0.45
Ptch2O35595 Aire-205ENSMUST00000130972 1923 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
Ptch2O35595 Aire-212ENSMUST00000145975 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
Ptch2O35595 Aire-201ENSMUST00000019257 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
Ptch2O35595 Mtch2-205ENSMUST00000136872 2596 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Ptch2O35595 Stim2-204ENSMUST00000201469 4892 ntAPPRIS ALT2 TSL 5 BASIC17.89■□□□□ 0.45
Ptch2O35595 Tmem245-202ENSMUST00000107609 2643 ntAPPRIS P2 TSL 5 BASIC17.89■□□□□ 0.45
Ptch2O35595 Cpsf4-207ENSMUST00000162244 1387 ntAPPRIS P4 TSL 1 (best) BASIC17.89■□□□□ 0.45
Ptch2O35595 Nfs1-201ENSMUST00000029147 2051 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Ptch2O35595 Smarcc1-207ENSMUST00000199896 5773 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
Ptch2O35595 Gm26781-201ENSMUST00000181385 1477 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Ptch2O35595 Col9a3-203ENSMUST00000132527 3046 ntAPPRIS P1 TSL 5 BASIC17.88■□□□□ 0.45
Ptch2O35595 AC163637.2-201ENSMUST00000213826 1945 ntAPPRIS P1 TSL 2 BASIC17.88■□□□□ 0.45
Ptch2O35595 Pqlc1-201ENSMUST00000070135 1911 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
Ptch2O35595 Hoxb2-201ENSMUST00000100523 1628 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Ptch2O35595 Csf1-203ENSMUST00000120243 2097 ntAPPRIS P3 TSL 1 (best) BASIC17.88■□□□□ 0.45
Ptch2O35595 Nmnat3-203ENSMUST00000112938 848 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Ptch2O35595 Mdfi-203ENSMUST00000113280 1281 ntTSL 5 BASIC17.88■□□□□ 0.45
Ptch2O35595 Vps9d1-203ENSMUST00000122363 2952 ntAPPRIS P3 TSL 1 (best) BASIC17.88■□□□□ 0.45
Ptch2O35595 D330023K18Rik-201ENSMUST00000133550 920 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Ptch2O35595 Gm16105-201ENSMUST00000156926 697 ntTSL 3 BASIC17.88■□□□□ 0.45
Ptch2O35595 Psmd13-209ENSMUST00000164681 726 ntTSL 5 BASIC17.88■□□□□ 0.45
Ptch2O35595 Fgf9-202ENSMUST00000074654 1198 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Ptch2O35595 Foxj1-201ENSMUST00000036215 2623 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Ptch2O35595 Crocc-201ENSMUST00000040222 6248 ntTSL 5 BASIC17.88■□□□□ 0.45
Ptch2O35595 Klf16-201ENSMUST00000038558 2674 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Ptch2O35595 Map6-206ENSMUST00000208605 2275 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
Ptch2O35595 Mmp11-201ENSMUST00000000924 2288 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Ptch2O35595 Aig1-201ENSMUST00000019942 1439 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Ptch2O35595 B3galnt2-204ENSMUST00000221300 2397 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Ptch2O35595 Mpst-201ENSMUST00000043865 1413 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Ptch2O35595 Cyb5d2-201ENSMUST00000079681 2393 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Ptch2O35595 Tbcel-201ENSMUST00000066148 5000 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Ptch2O35595 Gm15558-201ENSMUST00000126849 2018 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Ptch2O35595 Mthfd2-201ENSMUST00000005810 2085 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Ptch2O35595 Ets1-206ENSMUST00000184887 2107 ntTSL 5 BASIC17.87■□□□□ 0.45
Ptch2O35595 Smarca4-201ENSMUST00000034707 6354 ntAPPRIS P3 TSL 1 (best) BASIC17.87■□□□□ 0.45
Ptch2O35595 Ahr-202ENSMUST00000116436 5548 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Ptch2O35595 Nup85-201ENSMUST00000021085 2230 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Ptch2O35595 Gm6627-201ENSMUST00000218299 2386 ntBASIC17.87■□□□□ 0.45
Ptch2O35595 AA414768-201ENSMUST00000121924 1257 ntBASIC17.87■□□□□ 0.45
Ptch2O35595 Cdpf1-204ENSMUST00000144067 761 ntAPPRIS P1 TSL 2 BASIC17.87■□□□□ 0.45
Ptch2O35595 Steap1-201ENSMUST00000015796 1230 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Ptch2O35595 Vpreb1-201ENSMUST00000075017 766 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Ptch2O35595 Mfsd14a-201ENSMUST00000029570 2782 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Ptch2O35595 Dlgap1-209ENSMUST00000140728 2173 ntAPPRIS ALT2 TSL 5 BASIC17.87■□□□□ 0.45
Ptch2O35595 Elmo2-204ENSMUST00000103088 3052 ntAPPRIS ALT2 TSL 5 BASIC17.87■□□□□ 0.45
Ptch2O35595 Ube2d2a-201ENSMUST00000167406 2393 ntAPPRIS P1 TSL 5 BASIC17.87■□□□□ 0.45
Ptch2O35595 Nos1ap-207ENSMUST00000161966 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
Ptch2O35595 Miga1-201ENSMUST00000068243 2689 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Ptch2O35595 Krt86-201ENSMUST00000088049 1960 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Ptch2O35595 Chst8-203ENSMUST00000154629 2079 ntTSL 5 BASIC17.86■□□□□ 0.45
Ptch2O35595 Eif4e2-205ENSMUST00000113232 1125 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Ptch2O35595 Tekt5-202ENSMUST00000115831 1277 ntAPPRIS P3 TSL 1 (best) BASIC17.86■□□□□ 0.45
Ptch2O35595 Ccdc125-202ENSMUST00000170347 1216 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
Ptch2O35595 Gm22697-201ENSMUST00000175194 63 ntBASIC17.86■□□□□ 0.45
Ptch2O35595 Flg-203ENSMUST00000178695 777 ntAPPRIS P5 BASIC17.86■□□□□ 0.45
Ptch2O35595 Arpc4-204ENSMUST00000204802 794 ntTSL 3 BASIC17.86■□□□□ 0.45
Ptch2O35595 Gm29791-202ENSMUST00000207888 369 ntBASIC17.86■□□□□ 0.45
Ptch2O35595 D230030E09Rik-201ENSMUST00000222459 884 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Ptch2O35595 Rpl39l-201ENSMUST00000044103 805 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Ptch2O35595 Rab3ip-201ENSMUST00000020375 2690 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Ptch2O35595 Enah-205ENSMUST00000177811 4231 ntAPPRIS ALT2 TSL 5 BASIC17.86■□□□□ 0.45
Ptch2O35595 Hmg20b-201ENSMUST00000020454 1621 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Ptch2O35595 Gm6093-201ENSMUST00000221792 1623 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Ptch2O35595 Map3k7cl-201ENSMUST00000026700 1652 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Ptch2O35595 Tra2a-204ENSMUST00000204189 1777 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
Ptch2O35595 Marcks-201ENSMUST00000092584 4048 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Retrieved 100 of 76,532 protein–RNA pairs in 35.7 ms