Protein–RNA interactions for Protein: O35454

Clcn6, Chloride transport protein 6, mousemouse

Predictions only

Length 870 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clcn6O35454 2810404M03Rik-201ENSMUST00000188324 1245 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Clcn6O35454 Gm37179-201ENSMUST00000194862 823 ntBASIC18.57■□□□□ 0.56
Clcn6O35454 Gm45462-201ENSMUST00000211267 792 ntTSL 5 BASIC18.57■□□□□ 0.56
Clcn6O35454 Ccdc84-211ENSMUST00000217270 681 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Clcn6O35454 Mcrip2-201ENSMUST00000026828 816 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Clcn6O35454 Fcrlb-201ENSMUST00000094337 1284 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Clcn6O35454 Gapvd1-203ENSMUST00000113099 5758 ntAPPRIS ALT2 TSL 5 BASIC18.57■□□□□ 0.56
Clcn6O35454 Hmx2-202ENSMUST00000183219 1546 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Clcn6O35454 Gtpbp3-208ENSMUST00000168847 2803 ntAPPRIS ALT2 TSL 5 BASIC18.57■□□□□ 0.56
Clcn6O35454 Pcyt2-203ENSMUST00000106188 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
Clcn6O35454 Cep57-208ENSMUST00000147115 2262 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
Clcn6O35454 Npepl1-201ENSMUST00000044415 2467 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Clcn6O35454 Spire1-203ENSMUST00000115050 5405 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
Clcn6O35454 Bcar1-201ENSMUST00000166232 3142 ntAPPRIS P3 TSL 1 (best) BASIC18.56■□□□□ 0.56
Clcn6O35454 Ociad2-202ENSMUST00000200776 2359 ntTSL 3 BASIC18.56■□□□□ 0.56
Clcn6O35454 Ppm1n-201ENSMUST00000032560 1648 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Clcn6O35454 6430573F11Rik-202ENSMUST00000135373 2573 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Clcn6O35454 Zxdc-203ENSMUST00000113539 4864 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
Clcn6O35454 Fxr1-201ENSMUST00000001620 2459 ntTSL 5 BASIC18.56■□□□□ 0.56
Clcn6O35454 Pnck-202ENSMUST00000114472 1532 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Clcn6O35454 Adamtsl5-202ENSMUST00000105352 989 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Clcn6O35454 Sox5it-201ENSMUST00000144026 1207 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Clcn6O35454 Gnas-208ENSMUST00000109087 1716 ntAPPRIS P4 TSL 1 (best) BASIC18.56■□□□□ 0.56
Clcn6O35454 Zfp692-201ENSMUST00000049353 1860 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Clcn6O35454 Il6st-208ENSMUST00000184311 2985 ntAPPRIS P2 TSL 5 BASIC18.56■□□□□ 0.56
Clcn6O35454 Gm30003-201ENSMUST00000200700 1433 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Clcn6O35454 Parg-208ENSMUST00000170840 2894 ntAPPRIS ALT2 TSL 5 BASIC18.56■□□□□ 0.56
Clcn6O35454 Gm28441-201ENSMUST00000190927 1343 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Clcn6O35454 Gm26728-202ENSMUST00000203423 1333 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Clcn6O35454 Fev-201ENSMUST00000068631 1490 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Clcn6O35454 Gm8773-201ENSMUST00000101627 1268 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Clcn6O35454 Gm14201-201ENSMUST00000117627 289 ntBASIC18.55■□□□□ 0.56
Clcn6O35454 Gm15298-201ENSMUST00000145916 1212 ntTSL 5 BASIC18.55■□□□□ 0.56
Clcn6O35454 Gm19094-201ENSMUST00000209791 1246 ntBASIC18.55■□□□□ 0.56
Clcn6O35454 E330011O21Rik-205ENSMUST00000211317 1062 ntTSL 5 BASIC18.55■□□□□ 0.56
Clcn6O35454 AC079680.1-201ENSMUST00000218730 649 ntTSL 5 BASIC18.55■□□□□ 0.56
Clcn6O35454 Col15a1-202ENSMUST00000102917 5172 ntAPPRIS P2 TSL 1 (best) BASIC18.55■□□□□ 0.56
Clcn6O35454 Best2-203ENSMUST00000209421 2212 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Clcn6O35454 Lancl2-202ENSMUST00000072954 2245 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Clcn6O35454 Pmepa1-201ENSMUST00000036248 4538 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Clcn6O35454 Gm45447-201ENSMUST00000209874 1805 ntTSL 5 BASIC18.55■□□□□ 0.56
Clcn6O35454 Rchy1-204ENSMUST00000169948 1417 ntTSL 3 BASIC18.55■□□□□ 0.56
Clcn6O35454 Angptl6-201ENSMUST00000043726 1582 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Clcn6O35454 Tssk2-201ENSMUST00000055374 1387 ntAPPRIS P1 BASIC18.55■□□□□ 0.56
Clcn6O35454 4930503L19Rik-201ENSMUST00000067556 2291 ntAPPRIS P2 TSL 1 (best) BASIC18.54■□□□□ 0.56
Clcn6O35454 Proser2-201ENSMUST00000054254 2061 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Clcn6O35454 Podnl1-201ENSMUST00000093380 2090 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Clcn6O35454 Zc3h14-203ENSMUST00000110104 3146 ntTSL 5 BASIC18.54■□□□□ 0.56
Clcn6O35454 Clstn2-201ENSMUST00000035027 4365 ntAPPRIS P2 TSL 1 (best) BASIC18.54■□□□□ 0.56
Clcn6O35454 Mtch2-205ENSMUST00000136872 2596 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Clcn6O35454 Yeats4-201ENSMUST00000020382 1327 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Clcn6O35454 Cntln-201ENSMUST00000047023 5528 ntAPPRIS ALT2 TSL 5 BASIC18.54■□□□□ 0.56
Clcn6O35454 Pigl-201ENSMUST00000014389 2174 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Clcn6O35454 Sart3-201ENSMUST00000019118 4447 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Clcn6O35454 3110043O21Rik-203ENSMUST00000108127 3193 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Clcn6O35454 Csnk1g3-201ENSMUST00000069597 4394 ntAPPRIS P1 TSL 5 BASIC18.54■□□□□ 0.56
Clcn6O35454 Bend4-204ENSMUST00000201972 8268 ntAPPRIS P1 TSL 5 BASIC18.54■□□□□ 0.56
Clcn6O35454 2810459M11Rik-202ENSMUST00000165824 3331 ntAPPRIS P3 TSL 1 (best) BASIC18.54■□□□□ 0.56
Clcn6O35454 Gm12356-201ENSMUST00000122854 353 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Clcn6O35454 Fam241b-209ENSMUST00000142821 1283 ntAPPRIS P1 TSL 5 BASIC18.54■□□□□ 0.56
Clcn6O35454 Rell2-204ENSMUST00000163591 1057 ntTSL 5 BASIC18.54■□□□□ 0.56
Clcn6O35454 Snhg8-203ENSMUST00000199645 528 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Clcn6O35454 Prl6a1-201ENSMUST00000091679 1093 ntAPPRIS ALT2 TSL 5 BASIC18.54■□□□□ 0.56
Clcn6O35454 Prl6a1-202ENSMUST00000091680 868 ntAPPRIS P2 TSL 1 (best) BASIC18.54■□□□□ 0.56
Clcn6O35454 Tead3-205ENSMUST00000154873 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
Clcn6O35454 Mindy2-201ENSMUST00000049031 8081 ntAPPRIS P2 TSL 1 (best) BASIC18.54■□□□□ 0.56
Clcn6O35454 Camk2d-228ENSMUST00000200171 5396 ntTSL 5 BASIC18.54■□□□□ 0.56
Clcn6O35454 Foxp1-225ENSMUST00000177229 1848 ntAPPRIS ALT2 TSL 5 BASIC18.53■□□□□ 0.56
Clcn6O35454 Nfe2-210ENSMUST00000156927 1608 ntAPPRIS P1 TSL 5 BASIC18.53■□□□□ 0.56
Clcn6O35454 Mthfd2-201ENSMUST00000005810 2085 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Clcn6O35454 Wnt4-201ENSMUST00000045747 4194 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Clcn6O35454 Zfp467-201ENSMUST00000101443 599 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Clcn6O35454 Capzb-203ENSMUST00000102507 1702 ntAPPRIS P4 TSL 1 (best) BASIC18.53■□□□□ 0.56
Clcn6O35454 Agpat3-203ENSMUST00000105388 3681 ntAPPRIS P1 TSL 5 BASIC18.53■□□□□ 0.56
Clcn6O35454 AI507597-201ENSMUST00000140726 880 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Clcn6O35454 Gm9780-201ENSMUST00000184272 350 ntTSL 2 BASIC18.53■□□□□ 0.56
Clcn6O35454 Gm20918-202ENSMUST00000188637 1227 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Clcn6O35454 Ndufa5-201ENSMUST00000023851 875 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Clcn6O35454 Vmn1r11-201ENSMUST00000071304 900 ntAPPRIS P2 BASIC18.53■□□□□ 0.56
Clcn6O35454 Lsm2-201ENSMUST00000007266 873 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Clcn6O35454 Nin-203ENSMUST00000095666 7183 ntAPPRIS ALT2 TSL 5 BASIC18.53■□□□□ 0.56
Clcn6O35454 C130071C03Rik-203ENSMUST00000182788 1368 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Clcn6O35454 H2afx-201ENSMUST00000052686 1384 ntAPPRIS P1 BASIC18.53■□□□□ 0.56
Clcn6O35454 Pgm3-202ENSMUST00000072585 1920 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Clcn6O35454 Syde1-201ENSMUST00000040580 3288 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Clcn6O35454 Ulk1-201ENSMUST00000031490 5213 ntAPPRIS P3 TSL 1 (best) BASIC18.52■□□□□ 0.56
Clcn6O35454 Mff-202ENSMUST00000078332 1894 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Clcn6O35454 Zfp800-203ENSMUST00000115321 2699 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Clcn6O35454 Mipol1-201ENSMUST00000123498 2117 ntAPPRIS ALT2 TSL 5 BASIC18.52■□□□□ 0.56
Clcn6O35454 Sarnp-201ENSMUST00000105230 918 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Clcn6O35454 Gm15155-201ENSMUST00000112542 1009 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Clcn6O35454 Dpyd-204ENSMUST00000149101 531 ntTSL 3 BASIC18.52■□□□□ 0.56
Clcn6O35454 Erh-205ENSMUST00000218740 981 ntTSL 2 BASIC18.52■□□□□ 0.56
Clcn6O35454 Olfr718-ps1-204ENSMUST00000218872 963 ntAPPRIS ALT2 BASIC18.52■□□□□ 0.56
Clcn6O35454 6230400D17Rik-202ENSMUST00000224976 1019 ntBASIC18.52■□□□□ 0.56
Clcn6O35454 Cystm1-201ENSMUST00000050584 831 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.56
Clcn6O35454 Pop5-201ENSMUST00000081497 1025 ntAPPRIS P1 TSL 5 BASIC18.52■□□□□ 0.56
Clcn6O35454 Rpl21-203ENSMUST00000099272 1067 ntAPPRIS P1 TSL 3 BASIC18.52■□□□□ 0.56
Clcn6O35454 Wnt16-201ENSMUST00000031681 1663 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Clcn6O35454 Irak1-201ENSMUST00000033769 2890 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.56
Retrieved 100 of 76,532 protein–RNA pairs in 20.8 ms