Protein–RNA interactions for Protein: O08983

Hps1, Hermansky-Pudlak syndrome 1 protein homolog, mousemouse

Predictions only

Length 704 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hps1O08983 Ubxn1-201ENSMUST00000096255 1041 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Hps1O08983 BC107364-202ENSMUST00000098841 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
Hps1O08983 Ctnnbip1-201ENSMUST00000030839 2674 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Hps1O08983 Lrp8-201ENSMUST00000030356 4555 ntAPPRIS P5 TSL 5 BASIC16.22■□□□□ 0.19
Hps1O08983 Cyth2-201ENSMUST00000056820 2527 ntAPPRIS ALT1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Hps1O08983 Gm37194-201ENSMUST00000193092 3031 ntBASIC16.22■□□□□ 0.19
Hps1O08983 Fam3c-203ENSMUST00000163963 1617 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Hps1O08983 Rasgrp1-207ENSMUST00000178884 5104 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Hps1O08983 Mn1-201ENSMUST00000094463 6860 ntAPPRIS P1 TSL 2 BASIC16.22■□□□□ 0.19
Hps1O08983 Mfsd12-201ENSMUST00000044844 3971 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Hps1O08983 Clasp2-204ENSMUST00000213663 2727 ntTSL 5 BASIC16.22■□□□□ 0.19
Hps1O08983 Smarcd3-208ENSMUST00000195943 1712 ntTSL 5 BASIC16.22■□□□□ 0.19
Hps1O08983 Smarcd3-201ENSMUST00000030791 1735 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Hps1O08983 Bcor-203ENSMUST00000115512 6887 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
Hps1O08983 Gm45447-201ENSMUST00000209874 1805 ntTSL 5 BASIC16.22■□□□□ 0.19
Hps1O08983 Cep68-204ENSMUST00000162811 2788 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
Hps1O08983 Xxylt1-201ENSMUST00000055389 2987 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Hps1O08983 Gm1043-204ENSMUST00000207866 4296 ntAPPRIS P1 TSL 5 BASIC16.21■□□□□ 0.19
Hps1O08983 Ispd-207ENSMUST00000223205 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
Hps1O08983 Gfer-201ENSMUST00000046839 1775 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Hps1O08983 Rb1cc1-201ENSMUST00000027040 7607 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Hps1O08983 Chst8-204ENSMUST00000205259 1980 ntAPPRIS P1 TSL 5 BASIC16.21■□□□□ 0.19
Hps1O08983 Lhpp-202ENSMUST00000106170 999 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Hps1O08983 Gm19094-201ENSMUST00000209791 1246 ntBASIC16.21■□□□□ 0.19
Hps1O08983 Lrp5-202ENSMUST00000176867 2759 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Hps1O08983 Mrpl10-201ENSMUST00000001485 1708 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Hps1O08983 Gm7292-201ENSMUST00000194706 2527 ntBASIC16.21■□□□□ 0.19
Hps1O08983 Flt1-203ENSMUST00000110529 6292 ntTSL 1 (best) BASIC16.21■□□□□ 0.18
Hps1O08983 Agpat3-203ENSMUST00000105388 3681 ntAPPRIS P1 TSL 5 BASIC16.21■□□□□ 0.18
Hps1O08983 Abcd4-210ENSMUST00000223107 2410 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Hps1O08983 Cep83-201ENSMUST00000020212 3639 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Hps1O08983 H2-Q7-201ENSMUST00000071951 1406 ntAPPRIS P2 TSL 1 (best) BASIC16.2■□□□□ 0.18
Hps1O08983 Sgsm1-204ENSMUST00000112325 2274 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Hps1O08983 Zscan12-201ENSMUST00000053293 2270 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Hps1O08983 Sec1-201ENSMUST00000040636 2470 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Hps1O08983 Etv2-201ENSMUST00000108147 1048 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Hps1O08983 Gm38205-201ENSMUST00000192243 258 ntBASIC16.2■□□□□ 0.18
Hps1O08983 Jmjd7-201ENSMUST00000044675 1373 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Hps1O08983 Fndc4-202ENSMUST00000172435 2333 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Hps1O08983 Dmrt1-201ENSMUST00000025755 2340 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Hps1O08983 Stx4a-201ENSMUST00000033075 1456 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Hps1O08983 A930017K11Rik-201ENSMUST00000162431 2539 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Hps1O08983 Rasgrp2-224ENSMUST00000167240 2192 ntAPPRIS P1 TSL 5 BASIC16.2■□□□□ 0.18
Hps1O08983 Dvl2-201ENSMUST00000019362 2968 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Hps1O08983 Klhl25-203ENSMUST00000205612 1343 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Hps1O08983 Unc50-201ENSMUST00000027285 1414 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Hps1O08983 Senp2-201ENSMUST00000023561 4499 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Hps1O08983 Tcp1-201ENSMUST00000089024 1902 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Hps1O08983 Fezf1-201ENSMUST00000031709 2409 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Hps1O08983 Crlf3-201ENSMUST00000061283 2396 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Hps1O08983 Fam107a-202ENSMUST00000120411 2093 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Hps1O08983 Rab7-202ENSMUST00000113596 1657 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Hps1O08983 Lrp12-202ENSMUST00000110305 4244 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Hps1O08983 Mir6982-201ENSMUST00000184354 68 ntBASIC16.19■□□□□ 0.18
Hps1O08983 Olfr718-ps1-204ENSMUST00000218872 963 ntAPPRIS ALT2 BASIC16.19■□□□□ 0.18
Hps1O08983 Appl2-201ENSMUST00000020500 3020 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Hps1O08983 Six3os1-212ENSMUST00000177220 5601 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Hps1O08983 Nt5c3b-204ENSMUST00000107398 1635 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Hps1O08983 Dgkz-202ENSMUST00000099709 3512 ntAPPRIS ALT2 TSL 5 BASIC16.19■□□□□ 0.18
Hps1O08983 Dlgap1-206ENSMUST00000133717 2355 ntAPPRIS ALT2 TSL 5 BASIC16.19■□□□□ 0.18
Hps1O08983 Gm43859-201ENSMUST00000200075 1412 ntBASIC16.19■□□□□ 0.18
Hps1O08983 Zfp768-201ENSMUST00000060783 2356 ntAPPRIS P2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Hps1O08983 Sh3gl2-203ENSMUST00000107188 2286 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Hps1O08983 Zfp219-204ENSMUST00000226522 2804 ntAPPRIS P2 BASIC16.18■□□□□ 0.18
Hps1O08983 Nsmf-202ENSMUST00000074422 2824 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Hps1O08983 Slc25a47-202ENSMUST00000221080 1890 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Hps1O08983 Pcyt2-201ENSMUST00000026129 1881 ntAPPRIS P3 TSL 1 (best) BASIC16.18■□□□□ 0.18
Hps1O08983 Pgrmc1-201ENSMUST00000073339 1857 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Hps1O08983 Rnf103-201ENSMUST00000064637 3264 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Hps1O08983 Cyfip2-205ENSMUST00000165599 6659 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Hps1O08983 1810013L24Rik-201ENSMUST00000023150 4066 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Hps1O08983 Myh14-204ENSMUST00000207775 6499 ntAPPRIS ALT2 TSL 5 BASIC16.18■□□□□ 0.18
Hps1O08983 Psen2-202ENSMUST00000111104 1475 ntAPPRIS ALT1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Hps1O08983 Zdhhc15-201ENSMUST00000042070 5509 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Hps1O08983 Ankrd63-201ENSMUST00000104937 4861 ntAPPRIS P1 BASIC16.18■□□□□ 0.18
Hps1O08983 Zkscan3-204ENSMUST00000117721 5788 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Hps1O08983 Tmem136-202ENSMUST00000213544 2463 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Hps1O08983 Marc2-201ENSMUST00000068725 1917 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Hps1O08983 Gm11713-201ENSMUST00000139941 523 ntTSL 3 BASIC16.18■□□□□ 0.18
Hps1O08983 1110046J04Rik-201ENSMUST00000147622 397 ntTSL 3 BASIC16.18■□□□□ 0.18
Hps1O08983 Nnat-205ENSMUST00000153739 1146 ntAPPRIS ALT1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Hps1O08983 Nnat-206ENSMUST00000172487 404 ntTSL 5 BASIC16.18■□□□□ 0.18
Hps1O08983 Nnat-210ENSMUST00000173839 1135 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Hps1O08983 Rwdd1-201ENSMUST00000019917 1090 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Hps1O08983 Rpl18-202ENSMUST00000209287 1027 ntTSL 3 BASIC16.18■□□□□ 0.18
Hps1O08983 Gm20049-201ENSMUST00000219950 730 ntBASIC16.18■□□□□ 0.18
Hps1O08983 Ppm1b-202ENSMUST00000112304 3262 ntAPPRIS P3 TSL 1 (best) BASIC16.18■□□□□ 0.18
Hps1O08983 Rabep1-201ENSMUST00000076270 5408 ntAPPRIS P2 TSL 1 (best) BASIC16.18■□□□□ 0.18
Hps1O08983 Parg-201ENSMUST00000022470 4413 ntAPPRIS P2 TSL 1 (best) BASIC16.18■□□□□ 0.18
Hps1O08983 Spsb3-203ENSMUST00000117890 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
Hps1O08983 Zfp384-208ENSMUST00000112428 3132 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Hps1O08983 Gm5828-201ENSMUST00000071842 1860 ntBASIC16.18■□□□□ 0.18
Hps1O08983 Znrf1-201ENSMUST00000095176 3108 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Hps1O08983 Golga7-201ENSMUST00000051094 1792 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Hps1O08983 Itgb4-201ENSMUST00000021107 6014 ntAPPRIS P2 TSL 5 BASIC16.18■□□□□ 0.18
Hps1O08983 Cdon-202ENSMUST00000119129 7503 ntAPPRIS P1 TSL 5 BASIC16.18■□□□□ 0.18
Hps1O08983 Hps4-201ENSMUST00000035279 2836 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Hps1O08983 Efnb3-201ENSMUST00000004036 3183 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Hps1O08983 Mtmr12-201ENSMUST00000038172 6840 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Hps1O08983 Gm15635-204ENSMUST00000208024 2539 ntBASIC16.17■□□□□ 0.18
Retrieved 100 of 76,532 protein–RNA pairs in 47.3 ms