Protein–RNA interactions for Protein: J3QPF1

Gm10553, Predicted gene 10553, mousemouse

Predictions only

Length 123 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm10553J3QPF1 Alyref-201ENSMUST00000026125 3527 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Gm10553J3QPF1 Gm43042-201ENSMUST00000198676 1820 ntTSL 5 BASIC13.36□□□□□ -0.27
Gm10553J3QPF1 Nectin2-202ENSMUST00000108450 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Gm10553J3QPF1 Diras1-201ENSMUST00000055125 2953 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Gm10553J3QPF1 Ankle1-201ENSMUST00000119976 2136 ntAPPRIS P3 TSL 1 (best) BASIC13.36□□□□□ -0.27
Gm10553J3QPF1 Shroom3-201ENSMUST00000113051 6435 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Gm10553J3QPF1 Gm37194-201ENSMUST00000193092 3031 ntBASIC13.36□□□□□ -0.27
Gm10553J3QPF1 Snx16-202ENSMUST00000099223 2512 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Gm10553J3QPF1 H2-Q7-202ENSMUST00000076256 1523 ntAPPRIS ALT2 TSL 5 BASIC13.36□□□□□ -0.27
Gm10553J3QPF1 Ciz1-205ENSMUST00000113338 2666 ntAPPRIS P3 TSL 5 BASIC13.36□□□□□ -0.27
Gm10553J3QPF1 Gm10418-201ENSMUST00000100943 576 ntBASIC13.36□□□□□ -0.27
Gm10553J3QPF1 Gm10517-202ENSMUST00000192970 758 ntBASIC13.36□□□□□ -0.27
Gm10553J3QPF1 Gm44965-201ENSMUST00000204121 360 ntAPPRIS P1 TSL 3 BASIC13.36□□□□□ -0.27
Gm10553J3QPF1 AC175538.1-201ENSMUST00000225343 1269 ntBASIC13.36□□□□□ -0.27
Gm10553J3QPF1 4930412O13Rik-201ENSMUST00000026889 1187 ntAPPRIS P5 TSL 1 (best) BASIC13.36□□□□□ -0.27
Gm10553J3QPF1 Wtap-205ENSMUST00000160781 2442 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Gm10553J3QPF1 Naa60-212ENSMUST00000186375 2424 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Gm10553J3QPF1 Card10-202ENSMUST00000164826 4726 ntAPPRIS P2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Gm10553J3QPF1 5330438I03Rik-201ENSMUST00000168347 2845 ntBASIC13.36□□□□□ -0.27
Gm10553J3QPF1 Polr3gl-201ENSMUST00000091924 1427 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Gm10553J3QPF1 Iqsec2-202ENSMUST00000112604 5967 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Gm10553J3QPF1 Agfg2-201ENSMUST00000031736 2893 ntAPPRIS P3 TSL 1 (best) BASIC13.36□□□□□ -0.27
Gm10553J3QPF1 Srcin1-203ENSMUST00000107596 7054 ntAPPRIS P2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Gm10553J3QPF1 Slc7a10-201ENSMUST00000001854 1953 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Gm10553J3QPF1 Vat1-201ENSMUST00000040430 2766 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Gm10553J3QPF1 Unc13b-201ENSMUST00000079978 6354 ntAPPRIS P2 TSL 5 BASIC13.36□□□□□ -0.27
Gm10553J3QPF1 Col27a1-201ENSMUST00000036300 7612 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Gm10553J3QPF1 Ndufa10-201ENSMUST00000027478 2020 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Gm10553J3QPF1 Pard3-209ENSMUST00000160272 5815 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Gm10553J3QPF1 Rnf26-201ENSMUST00000056328 2724 ntAPPRIS P2 BASIC13.35□□□□□ -0.27
Gm10553J3QPF1 2810459M11Rik-202ENSMUST00000165824 3331 ntAPPRIS P3 TSL 1 (best) BASIC13.35□□□□□ -0.27
Gm10553J3QPF1 1700041G16Rik-202ENSMUST00000186344 1824 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Gm10553J3QPF1 Fam171b-201ENSMUST00000051454 5614 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Gm10553J3QPF1 Bex3-202ENSMUST00000113112 826 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Gm10553J3QPF1 Pgap3-205ENSMUST00000128897 1264 ntTSL 5 BASIC13.35□□□□□ -0.27
Gm10553J3QPF1 Gm16127-201ENSMUST00000131619 234 ntTSL 5 BASIC13.35□□□□□ -0.27
Gm10553J3QPF1 Tlx1os-201ENSMUST00000173437 620 ntTSL 3 BASIC13.35□□□□□ -0.27
Gm10553J3QPF1 Zfp428-203ENSMUST00000177205 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Gm10553J3QPF1 E030044B06Rik-201ENSMUST00000181195 1266 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Gm10553J3QPF1 Rsu1-209ENSMUST00000191959 720 ntTSL 3 BASIC13.35□□□□□ -0.27
Gm10553J3QPF1 Cldn24-201ENSMUST00000079639 663 ntAPPRIS P1 BASIC13.35□□□□□ -0.27
Gm10553J3QPF1 Mmp11-201ENSMUST00000000924 2288 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Gm10553J3QPF1 Pex11b-202ENSMUST00000118557 2424 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Gm10553J3QPF1 Hmces-202ENSMUST00000113606 1572 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Gm10553J3QPF1 Agfg2-202ENSMUST00000100544 2858 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Gm10553J3QPF1 Ubald1-201ENSMUST00000037843 1851 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Gm10553J3QPF1 Por-201ENSMUST00000005651 2636 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Gm10553J3QPF1 Shank3-203ENSMUST00000109309 7365 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Gm10553J3QPF1 F2rl3-201ENSMUST00000058099 1751 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Gm10553J3QPF1 Prcc-201ENSMUST00000005015 2099 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Gm10553J3QPF1 Spata2l-201ENSMUST00000098327 2380 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Gm10553J3QPF1 Cdkl3-207ENSMUST00000109080 2749 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Gm10553J3QPF1 Ppp2r1b-205ENSMUST00000175640 1523 ntTSL 5 BASIC13.34□□□□□ -0.27
Gm10553J3QPF1 Gm7712-202ENSMUST00000222331 1510 ntBASIC13.34□□□□□ -0.27
Gm10553J3QPF1 Arrb2-203ENSMUST00000102563 1352 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Gm10553J3QPF1 Tlk2-201ENSMUST00000015107 3212 ntAPPRIS P3 TSL 5 BASIC13.34□□□□□ -0.27
Gm10553J3QPF1 Rarb-207ENSMUST00000225921 2756 ntBASIC13.34□□□□□ -0.27
Gm10553J3QPF1 Nadk2-202ENSMUST00000100789 3578 ntAPPRIS ALT2 TSL 5 BASIC13.34□□□□□ -0.27
Gm10553J3QPF1 Tmem81-201ENSMUST00000058167 1742 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Gm10553J3QPF1 Rbbp7-202ENSMUST00000112326 1430 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Gm10553J3QPF1 Espn-204ENSMUST00000080042 1402 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Gm10553J3QPF1 Zmynd19-202ENSMUST00000148042 1103 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Gm10553J3QPF1 Mir6982-201ENSMUST00000184354 68 ntBASIC13.34□□□□□ -0.27
Gm10553J3QPF1 Uqcr11-201ENSMUST00000020372 445 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Gm10553J3QPF1 Gm16042-201ENSMUST00000204813 1247 ntBASIC13.34□□□□□ -0.27
Gm10553J3QPF1 Arfip2-212ENSMUST00000209550 1141 ntAPPRIS ALT1 TSL 5 BASIC13.34□□□□□ -0.27
Gm10553J3QPF1 Arfip2-214ENSMUST00000210911 938 ntTSL 5 BASIC13.34□□□□□ -0.27
Gm10553J3QPF1 Aldoa-ps3-201ENSMUST00000217558 306 ntBASIC13.34□□□□□ -0.27
Gm10553J3QPF1 4930505A04Rik-201ENSMUST00000041763 904 ntAPPRIS P1 TSL 2 BASIC13.34□□□□□ -0.27
Gm10553J3QPF1 Ppp2r1b-206ENSMUST00000175645 1931 ntAPPRIS ALT2 TSL 5 BASIC13.34□□□□□ -0.27
Gm10553J3QPF1 Glra1-203ENSMUST00000108853 1797 ntTSL 5 BASIC13.34□□□□□ -0.27
Gm10553J3QPF1 2810408A11Rik-201ENSMUST00000018714 1485 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Gm10553J3QPF1 Rnf44-204ENSMUST00000125871 4292 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Gm10553J3QPF1 Zfp623-201ENSMUST00000037260 2463 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Gm10553J3QPF1 Ctbp2-201ENSMUST00000033269 2321 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Gm10553J3QPF1 Fbxo7-203ENSMUST00000120344 1655 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Gm10553J3QPF1 Retreg1-201ENSMUST00000022881 3248 ntTSL 5 BASIC13.34□□□□□ -0.27
Gm10553J3QPF1 Abhd5-202ENSMUST00000111497 2576 ntTSL 1 (best) BASIC13.33□□□□□ -0.27
Gm10553J3QPF1 Il17rb-201ENSMUST00000016110 2061 ntAPPRIS P2 TSL 1 (best) BASIC13.33□□□□□ -0.27
Gm10553J3QPF1 Tbc1d9b-202ENSMUST00000101270 5213 ntAPPRIS ALT2 TSL 5 BASIC13.33□□□□□ -0.28
Gm10553J3QPF1 Ddx39b-203ENSMUST00000173731 2848 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Gm10553J3QPF1 Tmem136-202ENSMUST00000213544 2463 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Gm10553J3QPF1 Nos1ap-207ENSMUST00000161966 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Gm10553J3QPF1 Rbm24-201ENSMUST00000037923 3086 ntAPPRIS P1 TSL 2 BASIC13.33□□□□□ -0.28
Gm10553J3QPF1 Atxn7-201ENSMUST00000022257 6853 ntAPPRIS P2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Gm10553J3QPF1 Npm3-ps1-201ENSMUST00000119728 528 ntBASIC13.33□□□□□ -0.28
Gm10553J3QPF1 Id1-201ENSMUST00000038368 934 ntAPPRIS P2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Gm10553J3QPF1 Gm9803-201ENSMUST00000057649 563 ntAPPRIS P1 BASIC13.33□□□□□ -0.28
Gm10553J3QPF1 Npm3-201ENSMUST00000070215 888 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Gm10553J3QPF1 Gm10549-201ENSMUST00000097634 450 ntAPPRIS P1 TSL 2 BASIC13.33□□□□□ -0.28
Gm10553J3QPF1 Plxnd1-201ENSMUST00000015511 6907 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Gm10553J3QPF1 Fam109a-201ENSMUST00000056654 2368 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Gm10553J3QPF1 Rnf157-202ENSMUST00000106398 4553 ntAPPRIS ALT2 TSL 5 BASIC13.33□□□□□ -0.28
Gm10553J3QPF1 Nsg1-201ENSMUST00000031009 2581 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Gm10553J3QPF1 Polr3d-201ENSMUST00000000793 2016 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Gm10553J3QPF1 Cyp4f16-201ENSMUST00000003416 2227 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Gm10553J3QPF1 Map3k7-202ENSMUST00000080933 5669 ntAPPRIS P3 TSL 1 (best) BASIC13.33□□□□□ -0.28
Gm10553J3QPF1 Tmed3-201ENSMUST00000058488 1346 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Gm10553J3QPF1 Larp1b-206ENSMUST00000191872 1505 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Gm10553J3QPF1 4430402I18Rik-205ENSMUST00000162110 1559 ntAPPRIS P1 TSL 5 BASIC13.32□□□□□ -0.28
Retrieved 100 of 76,532 protein–RNA pairs in 18.8 ms