Protein–RNA interactions for Protein: J3QNE4

Ccdc180, Coiled-coil domain-containing 180, mousemouse

Predictions only

Length 1,664 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc180J3QNE4 Kcnk4-201ENSMUST00000025908 1715 ntAPPRIS P1 TSL 1 (best) BASIC31.9■■■□□ 2.7
Ccdc180J3QNE4 Nipsnap3b-201ENSMUST00000015391 1552 ntAPPRIS P1 TSL 1 (best) BASIC31.89■■■□□ 2.7
Ccdc180J3QNE4 Tfpt-202ENSMUST00000108641 1166 ntAPPRIS ALT2 TSL 1 (best) BASIC31.89■■■□□ 2.7
Ccdc180J3QNE4 AC156576.2-201ENSMUST00000222752 503 ntTSL 5 BASIC31.89■■■□□ 2.7
Ccdc180J3QNE4 D830030K20Rik-204ENSMUST00000225885 1142 ntBASIC31.89■■■□□ 2.7
Ccdc180J3QNE4 Upk3a-201ENSMUST00000023070 1106 ntAPPRIS P1 TSL 1 (best) BASIC31.89■■■□□ 2.7
Ccdc180J3QNE4 Nck2-201ENSMUST00000086421 2772 ntAPPRIS P1 TSL 1 (best) BASIC31.89■■■□□ 2.7
Ccdc180J3QNE4 Gm11373-201ENSMUST00000129791 2819 ntTSL 5 BASIC31.89■■■□□ 2.7
Ccdc180J3QNE4 Camk2b-202ENSMUST00000019133 2223 ntTSL 5 BASIC31.89■■■□□ 2.7
Ccdc180J3QNE4 Fbxo17-203ENSMUST00000108279 1563 ntTSL 1 (best) BASIC31.89■■■□□ 2.7
Ccdc180J3QNE4 Laptm4b-201ENSMUST00000022867 1902 ntAPPRIS P1 TSL 1 (best) BASIC31.89■■■□□ 2.7
Ccdc180J3QNE4 St8sia5-202ENSMUST00000079618 1989 ntAPPRIS P1 TSL 1 (best) BASIC31.89■■■□□ 2.7
Ccdc180J3QNE4 Rhoq-201ENSMUST00000024956 4151 ntAPPRIS P1 TSL 1 (best) BASIC31.89■■■□□ 2.7
Ccdc180J3QNE4 Foxj1-201ENSMUST00000036215 2623 ntAPPRIS P1 TSL 1 (best) BASIC31.88■■■□□ 2.69
Ccdc180J3QNE4 Mplkip-201ENSMUST00000049744 2672 ntAPPRIS P1 TSL 1 (best) BASIC31.88■■■□□ 2.69
Ccdc180J3QNE4 Sh2b3-203ENSMUST00000118580 2393 ntAPPRIS ALT2 TSL 2 BASIC31.88■■■□□ 2.69
Ccdc180J3QNE4 Pgrmc2-201ENSMUST00000058578 3007 ntAPPRIS P1 TSL 1 (best) BASIC31.88■■■□□ 2.69
Ccdc180J3QNE4 Serac1-201ENSMUST00000024570 2033 ntAPPRIS P3 TSL 1 (best) BASIC31.88■■■□□ 2.69
Ccdc180J3QNE4 Nat8f3-202ENSMUST00000168531 1347 ntAPPRIS P1 TSL 1 (best) BASIC31.88■■■□□ 2.69
Ccdc180J3QNE4 Snrnp48-201ENSMUST00000091641 1785 ntAPPRIS P1 TSL 1 (best) BASIC31.88■■■□□ 2.69
Ccdc180J3QNE4 Gm35558-201ENSMUST00000222675 2219 ntBASIC31.88■■■□□ 2.69
Ccdc180J3QNE4 Rap1b-201ENSMUST00000064667 2724 ntAPPRIS P1 TSL 1 (best) BASIC31.88■■■□□ 2.69
Ccdc180J3QNE4 Pou2f2-206ENSMUST00000108418 1934 ntTSL 1 (best) BASIC31.87■■■□□ 2.69
Ccdc180J3QNE4 4932702P03Rik-201ENSMUST00000138447 1482 ntTSL 1 (best) BASIC31.87■■■□□ 2.69
Ccdc180J3QNE4 Ptgis-202ENSMUST00000088041 1711 ntTSL 1 (best) BASIC31.87■■■□□ 2.69
Ccdc180J3QNE4 Tob1-201ENSMUST00000041589 2288 ntAPPRIS P1 TSL 1 (best) BASIC31.87■■■□□ 2.69
Ccdc180J3QNE4 Cldn7-204ENSMUST00000108597 913 ntAPPRIS P1 TSL 2 BASIC31.87■■■□□ 2.69
Ccdc180J3QNE4 Rapgef3os1-201ENSMUST00000149373 483 ntTSL 3 BASIC31.87■■■□□ 2.69
Ccdc180J3QNE4 Runx2-204ENSMUST00000159943 2316 ntAPPRIS P3 TSL 1 (best) BASIC31.87■■■□□ 2.69
Ccdc180J3QNE4 Lemd3-202ENSMUST00000119944 4743 ntAPPRIS P2 TSL 1 (best) BASIC31.87■■■□□ 2.69
Ccdc180J3QNE4 Tmem241-205ENSMUST00000209859 1426 ntAPPRIS P4 TSL 1 (best) BASIC31.87■■■□□ 2.69
Ccdc180J3QNE4 Chka-201ENSMUST00000025760 2319 ntAPPRIS ALT2 TSL 5 BASIC31.87■■■□□ 2.69
Ccdc180J3QNE4 Mthfsl-204ENSMUST00000186863 725 ntTSL 2 BASIC31.86■■■□□ 2.69
Ccdc180J3QNE4 AC164629.2-201ENSMUST00000217916 270 ntBASIC31.86■■■□□ 2.69
Ccdc180J3QNE4 Tomm22-201ENSMUST00000023062 1031 ntAPPRIS P1 TSL 1 (best) BASIC31.86■■■□□ 2.69
Ccdc180J3QNE4 Mfsd14a-201ENSMUST00000029570 2782 ntAPPRIS P1 TSL 1 (best) BASIC31.86■■■□□ 2.69
Ccdc180J3QNE4 Txndc5-201ENSMUST00000035988 2843 ntAPPRIS P3 TSL 1 (best) BASIC31.86■■■□□ 2.69
Ccdc180J3QNE4 Usp21-201ENSMUST00000065941 2219 ntAPPRIS P2 TSL 1 (best) BASIC31.86■■■□□ 2.69
Ccdc180J3QNE4 Gm15890-201ENSMUST00000161024 770 ntTSL 1 (best) BASIC31.86■■■□□ 2.69
Ccdc180J3QNE4 Mir3081-201ENSMUST00000175305 84 ntBASIC31.86■■■□□ 2.69
Ccdc180J3QNE4 Exosc5-201ENSMUST00000079634 1020 ntAPPRIS P1 TSL 1 (best) BASIC31.86■■■□□ 2.69
Ccdc180J3QNE4 Mgme1-203ENSMUST00000110028 2308 ntAPPRIS P1 TSL 1 (best) BASIC31.85■■■□□ 2.69
Ccdc180J3QNE4 Vangl2-203ENSMUST00000111264 2349 ntTSL 1 (best) BASIC31.85■■■□□ 2.69
Ccdc180J3QNE4 Grb14-201ENSMUST00000028252 1986 ntAPPRIS P1 TSL 1 (best) BASIC31.85■■■□□ 2.69
Ccdc180J3QNE4 Lrrc43-201ENSMUST00000094327 2046 ntAPPRIS P3 TSL 1 (best) BASIC31.85■■■□□ 2.69
Ccdc180J3QNE4 Rnpc3-203ENSMUST00000106536 1839 ntAPPRIS P3 TSL 1 (best) BASIC31.85■■■□□ 2.69
Ccdc180J3QNE4 Gm19569-202ENSMUST00000184658 1305 ntTSL 2 BASIC31.85■■■□□ 2.69
Ccdc180J3QNE4 Cnpy1-201ENSMUST00000117098 2661 ntTSL 1 (best) BASIC31.85■■■□□ 2.69
Ccdc180J3QNE4 Chst8-203ENSMUST00000154629 2079 ntTSL 5 BASIC31.85■■■□□ 2.69
Ccdc180J3QNE4 Gm5464-201ENSMUST00000100453 2156 ntAPPRIS P1 BASIC31.85■■■□□ 2.69
Ccdc180J3QNE4 Rdx-202ENSMUST00000061352 1502 ntTSL 1 (best) BASIC31.85■■■□□ 2.69
Ccdc180J3QNE4 Cdk10-201ENSMUST00000036880 1642 ntAPPRIS P1 TSL 1 (best) BASIC31.85■■■□□ 2.69
Ccdc180J3QNE4 Spata18-202ENSMUST00000071077 1978 ntAPPRIS P2 TSL 5 BASIC31.84■■■□□ 2.69
Ccdc180J3QNE4 Cables2-201ENSMUST00000108891 2975 ntAPPRIS P1 TSL 1 (best) BASIC31.84■■■□□ 2.69
Ccdc180J3QNE4 Map4k3-202ENSMUST00000112389 4231 ntAPPRIS ALT1 TSL 5 BASIC31.84■■■□□ 2.69
Ccdc180J3QNE4 Lhfp-201ENSMUST00000059562 2108 ntAPPRIS P1 TSL 1 (best) BASIC31.84■■■□□ 2.69
Ccdc180J3QNE4 Gm18115-201ENSMUST00000221209 621 ntBASIC31.84■■■□□ 2.69
Ccdc180J3QNE4 Ptcra-201ENSMUST00000041012 1283 ntAPPRIS P1 TSL 1 (best) BASIC31.84■■■□□ 2.69
Ccdc180J3QNE4 Fez2-201ENSMUST00000070039 1939 ntAPPRIS P3 TSL 1 (best) BASIC31.84■■■□□ 2.69
Ccdc180J3QNE4 Hmg20b-204ENSMUST00000122993 1502 ntTSL 1 (best) BASIC31.83■■■□□ 2.69
Ccdc180J3QNE4 Gm20422-202ENSMUST00000149782 956 ntTSL 2 BASIC31.83■■■□□ 2.69
Ccdc180J3QNE4 Gm26627-201ENSMUST00000181540 1487 ntTSL 1 (best) BASIC31.83■■■□□ 2.69
Ccdc180J3QNE4 2010010A06Rik-202ENSMUST00000186356 694 ntTSL 1 (best) BASIC31.83■■■□□ 2.69
Ccdc180J3QNE4 Hsd17b1-201ENSMUST00000019445 1339 ntAPPRIS P1 TSL 1 (best) BASIC31.83■■■□□ 2.69
Ccdc180J3QNE4 Dtnbp1-203ENSMUST00000220555 1589 ntAPPRIS ALT2 TSL 5 BASIC31.83■■■□□ 2.69
Ccdc180J3QNE4 Pnmt-201ENSMUST00000041301 1154 ntAPPRIS P1 TSL 1 (best) BASIC31.83■■■□□ 2.69
Ccdc180J3QNE4 Cenpw-201ENSMUST00000099985 1532 ntAPPRIS P2 TSL 1 (best) BASIC31.83■■■□□ 2.69
Ccdc180J3QNE4 Grin2d-201ENSMUST00000002848 5431 ntAPPRIS P1 TSL 1 (best) BASIC31.83■■■□□ 2.69
Ccdc180J3QNE4 Tnk1-202ENSMUST00000108626 1798 ntTSL 1 (best) BASIC31.83■■■□□ 2.69
Ccdc180J3QNE4 2810408A11Rik-203ENSMUST00000102580 1640 ntAPPRIS P3 TSL 1 (best) BASIC31.83■■■□□ 2.69
Ccdc180J3QNE4 F420014N23Rik-202ENSMUST00000219079 659 ntTSL 1 (best) BASIC31.83■■■□□ 2.69
Ccdc180J3QNE4 Olfr1232-201ENSMUST00000099785 936 ntAPPRIS P1 BASIC31.83■■■□□ 2.69
Ccdc180J3QNE4 Tyw5-209ENSMUST00000162686 1847 ntAPPRIS P1 TSL 1 (best) BASIC31.82■■■□□ 2.68
Ccdc180J3QNE4 Tyk2-205ENSMUST00000214864 1662 ntTSL 1 (best) BASIC31.82■■■□□ 2.68
Ccdc180J3QNE4 Sim1-202ENSMUST00000219436 1687 ntTSL 5 BASIC31.82■■■□□ 2.68
Ccdc180J3QNE4 Tnfrsf25-201ENSMUST00000025706 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC31.82■■■□□ 2.68
Ccdc180J3QNE4 Eif4g3-201ENSMUST00000058133 2663 ntTSL 1 (best) BASIC31.82■■■□□ 2.68
Ccdc180J3QNE4 Gsg1-201ENSMUST00000087729 1307 ntAPPRIS P4 TSL 1 (best) BASIC31.82■■■□□ 2.68
Ccdc180J3QNE4 Smim1-210ENSMUST00000146054 707 ntAPPRIS P1 TSL 1 (best) BASIC31.82■■■□□ 2.68
Ccdc180J3QNE4 Gm27742-201ENSMUST00000184667 60 ntBASIC31.82■■■□□ 2.68
Ccdc180J3QNE4 4833445I07Rik-201ENSMUST00000193193 1642 ntBASIC31.81■■■□□ 2.68
Ccdc180J3QNE4 Plekha4-206ENSMUST00000211155 2044 ntAPPRIS ALT2 TSL 5 BASIC31.81■■■□□ 2.68
Ccdc180J3QNE4 Slc16a10-202ENSMUST00000213488 2325 ntTSL 1 (best) BASIC31.81■■■□□ 2.68
Ccdc180J3QNE4 Fnbp1-205ENSMUST00000113552 1910 ntTSL 1 (best) BASIC31.81■■■□□ 2.68
Ccdc180J3QNE4 Atf4-201ENSMUST00000109605 1724 ntAPPRIS P1 TSL 1 (best) BASIC31.81■■■□□ 2.68
Ccdc180J3QNE4 Bex3-201ENSMUST00000053540 930 ntAPPRIS P3 TSL 1 (best) BASIC31.8■■■□□ 2.68
Ccdc180J3QNE4 Creg1-202ENSMUST00000111432 2163 ntAPPRIS P1 TSL 1 (best) BASIC31.8■■■□□ 2.68
Ccdc180J3QNE4 B3galnt2-204ENSMUST00000221300 2397 ntAPPRIS P1 TSL 1 (best) BASIC31.8■■■□□ 2.68
Ccdc180J3QNE4 Agfg1-205ENSMUST00000187899 2078 ntTSL 5 BASIC31.8■■■□□ 2.68
Ccdc180J3QNE4 Usp48-205ENSMUST00000105840 5741 ntAPPRIS P1 TSL 5 BASIC31.8■■■□□ 2.68
Ccdc180J3QNE4 Slbp-203ENSMUST00000101354 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC31.8■■■□□ 2.68
Ccdc180J3QNE4 Adal-203ENSMUST00000110662 1231 ntTSL 5 BASIC31.8■■■□□ 2.68
Ccdc180J3QNE4 Stard3nl-208ENSMUST00000200323 1128 ntTSL 1 (best) BASIC31.8■■■□□ 2.68
Ccdc180J3QNE4 CAAA01066804.1-201ENSMUST00000217800 611 ntTSL 3 BASIC31.8■■■□□ 2.68
Ccdc180J3QNE4 Spr-ps1-201ENSMUST00000089584 605 ntBASIC31.8■■■□□ 2.68
Ccdc180J3QNE4 Pou2f2-202ENSMUST00000108413 1599 ntTSL 1 (best) BASIC31.79■■■□□ 2.68
Ccdc180J3QNE4 Arhgef1-204ENSMUST00000117796 3508 ntAPPRIS ALT2 TSL 1 (best) BASIC31.79■■■□□ 2.68
Ccdc180J3QNE4 Pwwp2b-201ENSMUST00000093993 3057 ntTSL 1 (best) BASIC31.79■■■□□ 2.68
Ccdc180J3QNE4 Pdcd2l-201ENSMUST00000002710 1295 ntAPPRIS P1 TSL 1 (best) BASIC31.79■■■□□ 2.68
Ccdc180J3QNE4 Fbxo24-202ENSMUST00000111002 2306 ntTSL 5 BASIC31.79■■■□□ 2.68
Retrieved 100 of 76,532 protein–RNA pairs in 30.5 ms