Protein–RNA interactions for Protein: J3QMY9

Top6bl, Type 2 DNA topoisomerase 6 subunit B-like, mousemouse

Predictions only

Length 579 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Top6blJ3QMY9 Gaa-202ENSMUST00000106258 1369 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Top6blJ3QMY9 A930001A20Rik-201ENSMUST00000182586 1366 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Top6blJ3QMY9 Ctnnbip1-201ENSMUST00000030839 2674 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Top6blJ3QMY9 Rtkn-201ENSMUST00000065512 2191 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
Top6blJ3QMY9 Ssx2ip-204ENSMUST00000106153 3446 ntAPPRIS P3 TSL 1 (best) BASIC18.3■□□□□ 0.52
Top6blJ3QMY9 Tmc6-202ENSMUST00000103025 1279 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Top6blJ3QMY9 Gm15565-201ENSMUST00000118890 427 ntBASIC18.3■□□□□ 0.52
Top6blJ3QMY9 Gm12979-201ENSMUST00000145488 405 ntTSL 2 BASIC18.3■□□□□ 0.52
Top6blJ3QMY9 2210408F21Rik-211ENSMUST00000151800 750 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Top6blJ3QMY9 Ndufa12-201ENSMUST00000020209 1110 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Top6blJ3QMY9 Gm30025-201ENSMUST00000218555 728 ntBASIC18.3■□□□□ 0.52
Top6blJ3QMY9 Gzmd-201ENSMUST00000082093 964 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Top6blJ3QMY9 Hhipl1-201ENSMUST00000021685 5174 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Top6blJ3QMY9 Trim14-201ENSMUST00000046897 1429 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Top6blJ3QMY9 Zfp768-201ENSMUST00000060783 2356 ntAPPRIS P2 TSL 1 (best) BASIC18.3■□□□□ 0.52
Top6blJ3QMY9 Negr1-203ENSMUST00000106065 1953 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Top6blJ3QMY9 Ets1-206ENSMUST00000184887 2107 ntTSL 5 BASIC18.29■□□□□ 0.52
Top6blJ3QMY9 Polr1c-201ENSMUST00000087026 1314 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Top6blJ3QMY9 Traf3-203ENSMUST00000117269 6972 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Top6blJ3QMY9 Gabbr1-202ENSMUST00000172789 1460 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Top6blJ3QMY9 Ssr2-207ENSMUST00000195014 1059 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Top6blJ3QMY9 Gm42884-202ENSMUST00000202523 423 ntTSL 3 BASIC18.29■□□□□ 0.52
Top6blJ3QMY9 Ppp1r3f-201ENSMUST00000115742 3066 ntAPPRIS P3 TSL 1 (best) BASIC18.29■□□□□ 0.52
Top6blJ3QMY9 Klf16-201ENSMUST00000038558 2674 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Top6blJ3QMY9 Csf3-201ENSMUST00000038886 1413 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Top6blJ3QMY9 Gprc5c-203ENSMUST00000122967 1709 ntTSL 5 BASIC18.29■□□□□ 0.52
Top6blJ3QMY9 Ddx41-201ENSMUST00000021956 2205 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Top6blJ3QMY9 Agap3-205ENSMUST00000199856 2685 ntTSL 5 BASIC18.28■□□□□ 0.52
Top6blJ3QMY9 Snrnp48-201ENSMUST00000091641 1785 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Top6blJ3QMY9 Tia1-203ENSMUST00000095754 1789 ntAPPRIS ALT1 TSL 5 BASIC18.28■□□□□ 0.52
Top6blJ3QMY9 Gm14968-201ENSMUST00000155528 769 ntTSL 3 BASIC18.28■□□□□ 0.52
Top6blJ3QMY9 Stk11-210ENSMUST00000213772 1239 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
Top6blJ3QMY9 AC124601.2-201ENSMUST00000222888 759 ntTSL 2 BASIC18.28■□□□□ 0.52
Top6blJ3QMY9 Serac1-201ENSMUST00000024570 2033 ntAPPRIS P3 TSL 1 (best) BASIC18.28■□□□□ 0.52
Top6blJ3QMY9 Thumpd3-201ENSMUST00000032398 2163 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Top6blJ3QMY9 Kmt5c-201ENSMUST00000098853 2189 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Top6blJ3QMY9 Paxip1-201ENSMUST00000002291 5850 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Top6blJ3QMY9 Ggt6-202ENSMUST00000100903 1387 ntTSL 5 BASIC18.28■□□□□ 0.52
Top6blJ3QMY9 Tfap2a-208ENSMUST00000224999 2058 ntAPPRIS ALT1 BASIC18.27■□□□□ 0.52
Top6blJ3QMY9 BC029722-201ENSMUST00000124586 1615 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Top6blJ3QMY9 Cxadr-201ENSMUST00000023572 5734 ntAPPRIS P3 TSL 1 (best) BASIC18.27■□□□□ 0.52
Top6blJ3QMY9 Vps53-202ENSMUST00000094015 2645 ntTSL 5 BASIC18.27■□□□□ 0.52
Top6blJ3QMY9 Pacsin1-204ENSMUST00000114873 1857 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Top6blJ3QMY9 Ccdc105-201ENSMUST00000105383 1714 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Top6blJ3QMY9 Dcaf8-206ENSMUST00000192704 2859 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Top6blJ3QMY9 Pomp-201ENSMUST00000031654 1579 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Top6blJ3QMY9 0610012G03Rik-201ENSMUST00000202722 1445 ntAPPRIS P1 BASIC18.27■□□□□ 0.52
Top6blJ3QMY9 Hist1h4a-201ENSMUST00000102964 539 ntAPPRIS P1 BASIC18.27■□□□□ 0.52
Top6blJ3QMY9 Crct1-202ENSMUST00000107301 460 ntAPPRIS P1 TSL 2 BASIC18.27■□□□□ 0.52
Top6blJ3QMY9 Gm7638-201ENSMUST00000121348 967 ntBASIC18.27■□□□□ 0.52
Top6blJ3QMY9 Zfas1-205ENSMUST00000189909 738 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
Top6blJ3QMY9 Gm37025-201ENSMUST00000195159 829 ntBASIC18.27■□□□□ 0.52
Top6blJ3QMY9 Cspg5-205ENSMUST00000199736 2107 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
Top6blJ3QMY9 Dctn3-201ENSMUST00000030158 973 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Top6blJ3QMY9 Gm44832-201ENSMUST00000208849 2303 ntBASIC18.27■□□□□ 0.51
Top6blJ3QMY9 Nptxr-201ENSMUST00000023057 5004 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.51
Top6blJ3QMY9 Chst1-201ENSMUST00000065797 2680 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Top6blJ3QMY9 Tmem132d-201ENSMUST00000044441 6139 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Top6blJ3QMY9 Rragd-203ENSMUST00000098190 5008 ntAPPRIS P1 TSL 2 BASIC18.26■□□□□ 0.51
Top6blJ3QMY9 Cxcl14-201ENSMUST00000021970 1827 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Top6blJ3QMY9 Dleu2-208ENSMUST00000182768 1442 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Top6blJ3QMY9 Mpz-202ENSMUST00000111334 1278 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Top6blJ3QMY9 Anapc13-203ENSMUST00000188398 727 ntAPPRIS P1 TSL 2 BASIC18.26■□□□□ 0.51
Top6blJ3QMY9 Krt88-201ENSMUST00000023781 903 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Top6blJ3QMY9 Pfdn4-201ENSMUST00000063682 935 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Top6blJ3QMY9 Syt7-203ENSMUST00000169121 6834 ntTSL 5 BASIC18.26■□□□□ 0.51
Top6blJ3QMY9 Foxo3-204ENSMUST00000175881 2535 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Top6blJ3QMY9 Fbxw5-201ENSMUST00000015239 2388 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Top6blJ3QMY9 Htr6-202ENSMUST00000105802 2341 ntAPPRIS P1 TSL 5 BASIC18.26■□□□□ 0.51
Top6blJ3QMY9 Plekhg3-207ENSMUST00000219063 4535 ntAPPRIS ALT2 TSL 5 BASIC18.26■□□□□ 0.51
Top6blJ3QMY9 Purb-201ENSMUST00000179343 8319 ntAPPRIS P1 BASIC18.25■□□□□ 0.51
Top6blJ3QMY9 Snx14-205ENSMUST00000173011 2238 ntTSL 5 BASIC18.25■□□□□ 0.51
Top6blJ3QMY9 Sap18-201ENSMUST00000111267 660 ntTSL 2 BASIC18.25■□□□□ 0.51
Top6blJ3QMY9 2210408F21Rik-213ENSMUST00000153057 652 ntTSL 3 BASIC18.25■□□□□ 0.51
Top6blJ3QMY9 Cnih3-204ENSMUST00000209607 564 ntTSL 5 BASIC18.25■□□□□ 0.51
Top6blJ3QMY9 Kansl1l-201ENSMUST00000068168 4459 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Top6blJ3QMY9 Cd47-201ENSMUST00000084838 5277 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Top6blJ3QMY9 Gm2788-202ENSMUST00000147173 1390 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Top6blJ3QMY9 Tm2d3-202ENSMUST00000065574 1478 ntAPPRIS P4 TSL 1 (best) BASIC18.25■□□□□ 0.51
Top6blJ3QMY9 Slc43a1-202ENSMUST00000111624 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
Top6blJ3QMY9 Agfg2-202ENSMUST00000100544 2858 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
Top6blJ3QMY9 Stk32c-202ENSMUST00000165870 1883 ntTSL 5 BASIC18.24■□□□□ 0.51
Top6blJ3QMY9 9930012K11Rik-205ENSMUST00000153871 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
Top6blJ3QMY9 9930012K11Rik-201ENSMUST00000058240 1986 ntAPPRIS P3 TSL 1 (best) BASIC18.24■□□□□ 0.51
Top6blJ3QMY9 Acbd4-201ENSMUST00000024492 2075 ntAPPRIS P1 TSL 5 BASIC18.24■□□□□ 0.51
Top6blJ3QMY9 Wnk2-204ENSMUST00000110096 6534 ntAPPRIS ALT2 TSL 5 BASIC18.24■□□□□ 0.51
Top6blJ3QMY9 Ric3-202ENSMUST00000120876 1633 ntAPPRIS ALT1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Top6blJ3QMY9 A930012L18Rik-201ENSMUST00000181094 2364 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
Top6blJ3QMY9 Sept8-203ENSMUST00000120878 1806 ntAPPRIS ALT2 TSL 5 BASIC18.24■□□□□ 0.51
Top6blJ3QMY9 Hilpda-202ENSMUST00000115289 658 ntAPPRIS P1 TSL 3 BASIC18.24■□□□□ 0.51
Top6blJ3QMY9 Rpl18-ps2-201ENSMUST00000118863 567 ntBASIC18.24■□□□□ 0.51
Top6blJ3QMY9 Gm11539-201ENSMUST00000119837 557 ntBASIC18.24■□□□□ 0.51
Top6blJ3QMY9 Gm13436-201ENSMUST00000120418 567 ntBASIC18.24■□□□□ 0.51
Top6blJ3QMY9 1700025A08Rik-201ENSMUST00000200753 609 ntBASIC18.24■□□□□ 0.51
Top6blJ3QMY9 Rprml-201ENSMUST00000057870 1010 ntAPPRIS P1 BASIC18.24■□□□□ 0.51
Top6blJ3QMY9 Rps28-201ENSMUST00000087342 392 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Top6blJ3QMY9 Trappc3-201ENSMUST00000030660 1336 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Top6blJ3QMY9 Agbl4-205ENSMUST00000106591 1406 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
Top6blJ3QMY9 E030042O20Rik-201ENSMUST00000135244 1427 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Top6blJ3QMY9 Sema3c-201ENSMUST00000030568 5491 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Retrieved 100 of 76,532 protein–RNA pairs in 27.4 ms