Protein–RNA interactions for Protein: J3QMG8

Trav13d-3, T cell receptor alpha variable 13D-3 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav13d-3J3QMG8 Amigo2-201ENSMUST00000053106 2871 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Trav13d-3J3QMG8 Slc2a13-202ENSMUST00000109283 6536 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Trav13d-3J3QMG8 Tgds-201ENSMUST00000022727 1682 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Trav13d-3J3QMG8 Pitx2-201ENSMUST00000029657 1680 ntTSL 5 BASIC15.38■□□□□ 0.05
Trav13d-3J3QMG8 Haus8-201ENSMUST00000035960 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC15.38■□□□□ 0.05
Trav13d-3J3QMG8 Ddx19a-201ENSMUST00000040416 2547 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Trav13d-3J3QMG8 Ttc39a-201ENSMUST00000064129 2356 ntAPPRIS P3 TSL 1 (best) BASIC15.38■□□□□ 0.05
Trav13d-3J3QMG8 Gm20760-201ENSMUST00000179197 648 ntBASIC15.38■□□□□ 0.05
Trav13d-3J3QMG8 Sap30-201ENSMUST00000034022 1178 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Trav13d-3J3QMG8 AC125311.2-201ENSMUST00000227477 1940 ntBASIC15.38■□□□□ 0.05
Trav13d-3J3QMG8 Eif1a-202ENSMUST00000168382 1750 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Trav13d-3J3QMG8 Pcdhac2-201ENSMUST00000047479 5888 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Trav13d-3J3QMG8 Ssu72-201ENSMUST00000030905 1472 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Trav13d-3J3QMG8 4930461C15Rik-201ENSMUST00000133622 1302 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
Trav13d-3J3QMG8 Vkorc1l1-203ENSMUST00000201855 4809 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
Trav13d-3J3QMG8 Trim24-201ENSMUST00000031859 4042 ntAPPRIS P3 TSL 1 (best) BASIC15.38■□□□□ 0.05
Trav13d-3J3QMG8 Mark3-202ENSMUST00000084953 3365 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
Trav13d-3J3QMG8 Cables1-201ENSMUST00000046948 3202 ntAPPRIS P3 TSL 1 (best) BASIC15.38■□□□□ 0.05
Trav13d-3J3QMG8 Map4k4-202ENSMUST00000168431 5632 ntAPPRIS ALT2 TSL 5 BASIC15.37■□□□□ 0.05
Trav13d-3J3QMG8 Adsl-204ENSMUST00000164806 1595 ntTSL 5 BASIC15.37■□□□□ 0.05
Trav13d-3J3QMG8 Ankrd22-201ENSMUST00000025686 1766 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Trav13d-3J3QMG8 Tlcd1-204ENSMUST00000127587 1412 ntAPPRIS P3 TSL 1 (best) BASIC15.37■□□□□ 0.05
Trav13d-3J3QMG8 Sbf1-201ENSMUST00000123791 6190 ntAPPRIS P3 TSL 1 (best) BASIC15.37■□□□□ 0.05
Trav13d-3J3QMG8 Tnfaip8-208ENSMUST00000148989 1002 ntAPPRIS P1 TSL 2 BASIC15.37■□□□□ 0.05
Trav13d-3J3QMG8 Gm10698-201ENSMUST00000182663 604 ntBASIC15.37■□□□□ 0.05
Trav13d-3J3QMG8 Gm43183-201ENSMUST00000200632 547 ntBASIC15.37■□□□□ 0.05
Trav13d-3J3QMG8 4933406B15Rik-201ENSMUST00000220065 1182 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
Trav13d-3J3QMG8 Flywch2-201ENSMUST00000024704 694 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Trav13d-3J3QMG8 Epn1-202ENSMUST00000098845 2565 ntAPPRIS P2 TSL 1 (best) BASIC15.37■□□□□ 0.05
Trav13d-3J3QMG8 Runx1t1-201ENSMUST00000006761 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC15.37■□□□□ 0.05
Trav13d-3J3QMG8 Hmga1-204ENSMUST00000118570 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Trav13d-3J3QMG8 Ube2k-201ENSMUST00000142407 4893 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Trav13d-3J3QMG8 Prss12-201ENSMUST00000029603 2602 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Trav13d-3J3QMG8 Rtn4-204ENSMUST00000102842 2257 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
Trav13d-3J3QMG8 Auh-202ENSMUST00000110031 3235 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
Trav13d-3J3QMG8 Ccdc124-201ENSMUST00000007865 1356 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Trav13d-3J3QMG8 Sort1-201ENSMUST00000102632 6796 ntAPPRIS P3 TSL 1 (best) BASIC15.36■□□□□ 0.05
Trav13d-3J3QMG8 Matn4-202ENSMUST00000103104 2243 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Trav13d-3J3QMG8 Bub3-201ENSMUST00000084502 2218 ntAPPRIS P2 TSL 1 (best) BASIC15.36■□□□□ 0.05
Trav13d-3J3QMG8 Cdc14b-201ENSMUST00000039318 5859 ntAPPRIS P3 TSL 1 (best) BASIC15.36■□□□□ 0.05
Trav13d-3J3QMG8 2810408A11Rik-201ENSMUST00000018714 1485 ntAPPRIS ALT2 TSL 1 (best) BASIC15.36■□□□□ 0.05
Trav13d-3J3QMG8 Hist1h4a-201ENSMUST00000102964 539 ntAPPRIS P1 BASIC15.36■□□□□ 0.05
Trav13d-3J3QMG8 Gm12382-201ENSMUST00000122005 922 ntBASIC15.36■□□□□ 0.05
Trav13d-3J3QMG8 Gm17041-201ENSMUST00000163196 479 ntTSL 3 BASIC15.36■□□□□ 0.05
Trav13d-3J3QMG8 Ccdc58-202ENSMUST00000163352 970 ntTSL 3 BASIC15.36■□□□□ 0.05
Trav13d-3J3QMG8 Ccdc58-203ENSMUST00000164916 1096 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Trav13d-3J3QMG8 Klf13-202ENSMUST00000183817 599 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
Trav13d-3J3QMG8 Cdk2ap2-201ENSMUST00000025779 1080 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Trav13d-3J3QMG8 Apba3-201ENSMUST00000057798 2106 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Trav13d-3J3QMG8 Slc25a31-201ENSMUST00000091184 2128 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Trav13d-3J3QMG8 Rtkn-201ENSMUST00000065512 2191 ntAPPRIS ALT2 TSL 1 (best) BASIC15.36■□□□□ 0.05
Trav13d-3J3QMG8 Aurkb-201ENSMUST00000021277 1950 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Trav13d-3J3QMG8 Cmip-202ENSMUST00000166750 2408 ntAPPRIS P1 TSL 5 BASIC15.36■□□□□ 0.05
Trav13d-3J3QMG8 Gm37519-201ENSMUST00000191687 2210 ntBASIC15.36■□□□□ 0.05
Trav13d-3J3QMG8 Rnf112-202ENSMUST00000060255 3161 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
Trav13d-3J3QMG8 Lrrc47-201ENSMUST00000030894 3395 ntAPPRIS P2 TSL 1 (best) BASIC15.35■□□□□ 0.05
Trav13d-3J3QMG8 Gm16863-201ENSMUST00000181476 2431 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
Trav13d-3J3QMG8 Usp36-202ENSMUST00000106296 5655 ntAPPRIS P1 TSL 5 BASIC15.35■□□□□ 0.05
Trav13d-3J3QMG8 Neurl1b-201ENSMUST00000053020 6195 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Trav13d-3J3QMG8 Col4a3bp-201ENSMUST00000077672 2746 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Trav13d-3J3QMG8 Card10-203ENSMUST00000170584 3220 ntAPPRIS ALT2 TSL 5 BASIC15.35■□□□□ 0.05
Trav13d-3J3QMG8 Stox1-202ENSMUST00000133371 3510 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Trav13d-3J3QMG8 Sh2b2-203ENSMUST00000196397 2797 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Trav13d-3J3QMG8 Acadvl-201ENSMUST00000018718 2020 ntAPPRIS ALT2 TSL 5 BASIC15.35■□□□□ 0.05
Trav13d-3J3QMG8 Naa10-205ENSMUST00000114390 797 ntTSL 5 BASIC15.35■□□□□ 0.05
Trav13d-3J3QMG8 Serf1-204ENSMUST00000151821 570 ntTSL 2 BASIC15.35■□□□□ 0.05
Trav13d-3J3QMG8 Nadk2-202ENSMUST00000100789 3578 ntAPPRIS ALT2 TSL 5 BASIC15.35■□□□□ 0.05
Trav13d-3J3QMG8 Vgf-204ENSMUST00000190827 2834 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Trav13d-3J3QMG8 Fam171a1-204ENSMUST00000115099 4149 ntAPPRIS P3 TSL 1 (best) BASIC15.35■□□□□ 0.05
Trav13d-3J3QMG8 Vangl2-203ENSMUST00000111264 2349 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
Trav13d-3J3QMG8 Nf2-205ENSMUST00000109910 4720 ntAPPRIS P3 TSL 1 (best) BASIC15.35■□□□□ 0.05
Trav13d-3J3QMG8 Btnl9-201ENSMUST00000046522 5273 ntAPPRIS P2 TSL 1 (best) BASIC15.35■□□□□ 0.05
Trav13d-3J3QMG8 Pdap1-201ENSMUST00000031627 2353 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Trav13d-3J3QMG8 Gnao1-201ENSMUST00000034198 2948 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Trav13d-3J3QMG8 Stk32c-202ENSMUST00000165870 1883 ntTSL 5 BASIC15.35■□□□□ 0.05
Trav13d-3J3QMG8 Itgb1bp1-201ENSMUST00000076260 1874 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Trav13d-3J3QMG8 Iqsec2-207ENSMUST00000168786 5993 ntAPPRIS ALT2 TSL 1 (best) BASIC15.35■□□□□ 0.05
Trav13d-3J3QMG8 Abhd10-201ENSMUST00000066983 2848 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Trav13d-3J3QMG8 Gm42417-201ENSMUST00000191849 2256 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Trav13d-3J3QMG8 Ilk-212ENSMUST00000163389 1749 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Trav13d-3J3QMG8 Tm2d3-202ENSMUST00000065574 1478 ntAPPRIS P4 TSL 1 (best) BASIC15.34■□□□□ 0.05
Trav13d-3J3QMG8 Nfs1-201ENSMUST00000029147 2051 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Trav13d-3J3QMG8 Ppm1b-202ENSMUST00000112304 3262 ntAPPRIS P3 TSL 1 (best) BASIC15.34■□□□□ 0.05
Trav13d-3J3QMG8 Vac14-201ENSMUST00000034190 3069 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Trav13d-3J3QMG8 Rab1a-201ENSMUST00000020358 2827 ntAPPRIS ALT1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Trav13d-3J3QMG8 Nipsnap3b-201ENSMUST00000015391 1552 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Trav13d-3J3QMG8 2010016I18Rik-204ENSMUST00000190356 1562 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Trav13d-3J3QMG8 Bex3-202ENSMUST00000113112 826 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
Trav13d-3J3QMG8 Gm15378-201ENSMUST00000121894 207 ntBASIC15.34■□□□□ 0.05
Trav13d-3J3QMG8 Ly6g6d-201ENSMUST00000007259 546 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Trav13d-3J3QMG8 Prkra-201ENSMUST00000002808 1614 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Trav13d-3J3QMG8 Kat14-208ENSMUST00000147747 3299 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Trav13d-3J3QMG8 Coil-201ENSMUST00000036649 2607 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Trav13d-3J3QMG8 8030462N17Rik-201ENSMUST00000074653 3418 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Trav13d-3J3QMG8 Proser2-201ENSMUST00000054254 2061 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Trav13d-3J3QMG8 St7l-202ENSMUST00000106769 2428 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Trav13d-3J3QMG8 Ift74-201ENSMUST00000030311 2139 ntAPPRIS P1 TSL 5 BASIC15.34■□□□□ 0.05
Trav13d-3J3QMG8 Ubac2-201ENSMUST00000039803 2139 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Trav13d-3J3QMG8 Cacnb1-204ENSMUST00000107561 1778 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Trav13d-3J3QMG8 Tmem131-201ENSMUST00000027290 6546 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Retrieved 100 of 76,532 protein–RNA pairs in 26.1 ms