Protein–RNA interactions for Protein: H3BJZ2

Cdhr4, Cadherin-related family member 4, mousemouse

Predictions only

Length 783 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdhr4H3BJZ2 Zfp78-205ENSMUST00000208030 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC15.5■□□□□ 0.07
Cdhr4H3BJZ2 Ltbp4-202ENSMUST00000108369 5377 ntAPPRIS ALT2 TSL 5 BASIC15.5■□□□□ 0.07
Cdhr4H3BJZ2 Rnf112-201ENSMUST00000054927 3086 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
Cdhr4H3BJZ2 Sh3bp1-202ENSMUST00000061239 1917 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
Cdhr4H3BJZ2 Thsd7a-202ENSMUST00000119581 5678 ntAPPRIS P2 TSL 5 BASIC15.5■□□□□ 0.07
Cdhr4H3BJZ2 Ncor1-203ENSMUST00000069456 3171 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
Cdhr4H3BJZ2 Kcns1-201ENSMUST00000045196 2712 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Cdhr4H3BJZ2 Kcng3-201ENSMUST00000051482 3356 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Cdhr4H3BJZ2 Pgs1-203ENSMUST00000132676 2863 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Cdhr4H3BJZ2 Itgb4-205ENSMUST00000106461 6208 ntAPPRIS ALT2 TSL 5 BASIC15.49■□□□□ 0.07
Cdhr4H3BJZ2 Gm5953-201ENSMUST00000220644 2616 ntBASIC15.49■□□□□ 0.07
Cdhr4H3BJZ2 Nptxr-203ENSMUST00000175858 4948 ntAPPRIS P2 TSL 1 (best) BASIC15.49■□□□□ 0.07
Cdhr4H3BJZ2 Nr1d2-201ENSMUST00000090543 4663 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Cdhr4H3BJZ2 Dlk2-202ENSMUST00000166280 1341 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Cdhr4H3BJZ2 Rassf1-201ENSMUST00000010211 1727 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
Cdhr4H3BJZ2 Runx2-204ENSMUST00000159943 2316 ntAPPRIS P3 TSL 1 (best) BASIC15.49■□□□□ 0.07
Cdhr4H3BJZ2 Sh3glb1-202ENSMUST00000198254 5945 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
Cdhr4H3BJZ2 Alcam-201ENSMUST00000023312 6036 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Cdhr4H3BJZ2 Gm45141-201ENSMUST00000206502 1888 ntBASIC15.49■□□□□ 0.07
Cdhr4H3BJZ2 Atf7ip2-204ENSMUST00000119023 1048 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
Cdhr4H3BJZ2 Slc25a51-203ENSMUST00000132815 1005 ntAPPRIS P1 TSL 2 BASIC15.49■□□□□ 0.07
Cdhr4H3BJZ2 Mir2861-201ENSMUST00000175539 82 ntBASIC15.49■□□□□ 0.07
Cdhr4H3BJZ2 Comtd1-204ENSMUST00000177527 714 ntAPPRIS ALT2 TSL 5 BASIC15.49■□□□□ 0.07
Cdhr4H3BJZ2 E030044B06Rik-201ENSMUST00000181195 1266 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
Cdhr4H3BJZ2 Timm23-208ENSMUST00000226683 750 ntBASIC15.49■□□□□ 0.07
Cdhr4H3BJZ2 Tpsg1-201ENSMUST00000024999 1186 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Cdhr4H3BJZ2 Tollip-202ENSMUST00000055819 1100 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
Cdhr4H3BJZ2 Limd2-202ENSMUST00000064545 798 ntAPPRIS P1 TSL 2 BASIC15.49■□□□□ 0.07
Cdhr4H3BJZ2 Gm10273-201ENSMUST00000092511 1126 ntAPPRIS P1 BASIC15.49■□□□□ 0.07
Cdhr4H3BJZ2 Tyw5-209ENSMUST00000162686 1847 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Cdhr4H3BJZ2 Mboat1-201ENSMUST00000047311 2905 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Cdhr4H3BJZ2 Cyth2-202ENSMUST00000107729 2519 ntAPPRIS P2 TSL 1 (best) BASIC15.49■□□□□ 0.07
Cdhr4H3BJZ2 Ptprt-201ENSMUST00000109441 6623 ntAPPRIS ALT2 TSL 1 (best) BASIC15.48■□□□□ 0.07
Cdhr4H3BJZ2 Inppl1-201ENSMUST00000035836 4995 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Cdhr4H3BJZ2 Sec61a2-202ENSMUST00000102981 2448 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Cdhr4H3BJZ2 Tax1bp3-201ENSMUST00000040687 1523 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Cdhr4H3BJZ2 Anks1b-217ENSMUST00000182550 1868 ntTSL 5 BASIC15.48■□□□□ 0.07
Cdhr4H3BJZ2 Actr3-201ENSMUST00000027579 2554 ntAPPRIS P1 TSL 5 BASIC15.48■□□□□ 0.07
Cdhr4H3BJZ2 Il4i1-201ENSMUST00000033015 2048 ntAPPRIS P3 TSL 1 (best) BASIC15.48■□□□□ 0.07
Cdhr4H3BJZ2 AC108858.1-201ENSMUST00000228461 1498 ntBASIC15.48■□□□□ 0.07
Cdhr4H3BJZ2 Kdm1a-202ENSMUST00000105847 3028 ntAPPRIS ALT2 TSL 5 BASIC15.48■□□□□ 0.07
Cdhr4H3BJZ2 Chka-201ENSMUST00000025760 2319 ntAPPRIS ALT2 TSL 5 BASIC15.48■□□□□ 0.07
Cdhr4H3BJZ2 Gm12085-201ENSMUST00000119263 940 ntBASIC15.48■□□□□ 0.07
Cdhr4H3BJZ2 Ccl27a-219ENSMUST00000173865 657 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
Cdhr4H3BJZ2 Fkbp3-201ENSMUST00000021332 1022 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Cdhr4H3BJZ2 Lce1m-201ENSMUST00000029520 874 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Cdhr4H3BJZ2 Grip1-201ENSMUST00000041962 5343 ntAPPRIS ALT2 TSL 1 (best) BASIC15.48■□□□□ 0.07
Cdhr4H3BJZ2 Cadps2-212ENSMUST00000163871 4969 ntAPPRIS ALT2 TSL 5 BASIC15.48■□□□□ 0.07
Cdhr4H3BJZ2 Rarb-207ENSMUST00000225921 2756 ntBASIC15.48■□□□□ 0.07
Cdhr4H3BJZ2 Golga7-202ENSMUST00000121783 1945 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Cdhr4H3BJZ2 Gm44832-201ENSMUST00000208849 2303 ntBASIC15.48■□□□□ 0.07
Cdhr4H3BJZ2 Mtmr3-202ENSMUST00000109943 5674 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Cdhr4H3BJZ2 Senp2-201ENSMUST00000023561 4499 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Cdhr4H3BJZ2 Wtap-205ENSMUST00000160781 2442 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
Cdhr4H3BJZ2 Hmces-201ENSMUST00000032141 1464 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Cdhr4H3BJZ2 Ddit4-201ENSMUST00000020308 1755 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Cdhr4H3BJZ2 Atg16l2-202ENSMUST00000122116 2083 ntAPPRIS ALT2 TSL 1 (best) BASIC15.47■□□□□ 0.07
Cdhr4H3BJZ2 Clstn2-201ENSMUST00000035027 4365 ntAPPRIS P2 TSL 1 (best) BASIC15.47■□□□□ 0.07
Cdhr4H3BJZ2 Schip1-201ENSMUST00000029346 2201 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
Cdhr4H3BJZ2 Epo-203ENSMUST00000111039 706 ntAPPRIS ALT2 TSL 1 (best) BASIC15.47■□□□□ 0.07
Cdhr4H3BJZ2 Foxp1-230ENSMUST00000177437 2468 ntAPPRIS P2 TSL 1 (best) BASIC15.47■□□□□ 0.07
Cdhr4H3BJZ2 H2-DMa-201ENSMUST00000042121 1555 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Cdhr4H3BJZ2 Hist1h2bh-201ENSMUST00000224359 1679 ntAPPRIS P1 BASIC15.47■□□□□ 0.07
Cdhr4H3BJZ2 Dusp12-201ENSMUST00000027970 1374 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Cdhr4H3BJZ2 Zfp800-203ENSMUST00000115321 2699 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Cdhr4H3BJZ2 Usp49-201ENSMUST00000024779 8252 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Cdhr4H3BJZ2 Creg1-202ENSMUST00000111432 2163 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Cdhr4H3BJZ2 AC154231.1-201ENSMUST00000220564 2175 ntBASIC15.46■□□□□ 0.07
Cdhr4H3BJZ2 Gpr162-204ENSMUST00000204667 2855 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Cdhr4H3BJZ2 Krt77-201ENSMUST00000087996 2930 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Cdhr4H3BJZ2 Fbxw5-201ENSMUST00000015239 2388 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Cdhr4H3BJZ2 Tekt1-201ENSMUST00000021155 1447 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Cdhr4H3BJZ2 1810043G02Rik-201ENSMUST00000105397 1818 ntAPPRIS P2 TSL 1 (best) BASIC15.46■□□□□ 0.07
Cdhr4H3BJZ2 Ccnd2-204ENSMUST00000201637 1006 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
Cdhr4H3BJZ2 Tomm20-202ENSMUST00000212771 458 ntTSL 2 BASIC15.46■□□□□ 0.07
Cdhr4H3BJZ2 Aldoa-ps3-201ENSMUST00000217558 306 ntBASIC15.46■□□□□ 0.07
Cdhr4H3BJZ2 Gm26709-202ENSMUST00000223049 819 ntTSL 5 BASIC15.46■□□□□ 0.07
Cdhr4H3BJZ2 AC130671.1-201ENSMUST00000227384 1237 ntBASIC15.46■□□□□ 0.07
Cdhr4H3BJZ2 Ntpcr-201ENSMUST00000034313 1155 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Cdhr4H3BJZ2 Gm11373-201ENSMUST00000129791 2819 ntTSL 5 BASIC15.46■□□□□ 0.07
Cdhr4H3BJZ2 Ankle1-202ENSMUST00000120725 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC15.46■□□□□ 0.06
Cdhr4H3BJZ2 Tfap4-201ENSMUST00000005862 2113 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.06
Cdhr4H3BJZ2 Naif1-201ENSMUST00000048431 4650 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.06
Cdhr4H3BJZ2 St8sia5-202ENSMUST00000079618 1989 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Cdhr4H3BJZ2 Tbx2-201ENSMUST00000000095 3626 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Cdhr4H3BJZ2 Npas3-201ENSMUST00000101432 5879 ntAPPRIS P2 TSL 1 (best) BASIC15.45■□□□□ 0.06
Cdhr4H3BJZ2 Ube2z-201ENSMUST00000100528 3997 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Cdhr4H3BJZ2 Wnt10b-202ENSMUST00000166022 1594 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Cdhr4H3BJZ2 Ddx39b-203ENSMUST00000173731 2848 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Cdhr4H3BJZ2 Mid1-203ENSMUST00000079443 2815 ntTSL 5 BASIC15.45■□□□□ 0.06
Cdhr4H3BJZ2 Dynll2-202ENSMUST00000107923 2443 ntAPPRIS P1 TSL 3 BASIC15.45■□□□□ 0.06
Cdhr4H3BJZ2 Fbxo7-203ENSMUST00000120344 1655 ntAPPRIS ALT2 TSL 1 (best) BASIC15.45■□□□□ 0.06
Cdhr4H3BJZ2 Fst-202ENSMUST00000223640 2612 ntBASIC15.45■□□□□ 0.06
Cdhr4H3BJZ2 Bad-202ENSMUST00000113423 990 ntAPPRIS ALT2 TSL 1 (best) BASIC15.45■□□□□ 0.06
Cdhr4H3BJZ2 Gm6433-201ENSMUST00000118634 875 ntBASIC15.45■□□□□ 0.06
Cdhr4H3BJZ2 Gm20544-201ENSMUST00000174338 690 ntTSL 3 BASIC15.45■□□□□ 0.06
Cdhr4H3BJZ2 Gm10517-202ENSMUST00000192970 758 ntBASIC15.45■□□□□ 0.06
Cdhr4H3BJZ2 Lamtor5-202ENSMUST00000199317 743 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Cdhr4H3BJZ2 Gm42738-201ENSMUST00000201813 439 ntTSL 3 BASIC15.45■□□□□ 0.06
Cdhr4H3BJZ2 Pthlh-202ENSMUST00000204197 1281 ntAPPRIS P1 TSL 5 BASIC15.45■□□□□ 0.06
Retrieved 100 of 76,532 protein–RNA pairs in 28.2 ms