Protein–RNA interactions for Protein: F6WEU2

Ccdc188, Coiled-coil domain-containing 188, mousemouse

Predictions only

Length 249 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc188F6WEU2 Epb41l4b-201ENSMUST00000030142 3247 ntAPPRIS P2 TSL 1 (best) BASIC17.73■□□□□ 0.43
Ccdc188F6WEU2 Snrnp25-201ENSMUST00000039601 821 ntAPPRIS P2 TSL 1 (best) BASIC17.72■□□□□ 0.43
Ccdc188F6WEU2 Dupd1-201ENSMUST00000073870 1138 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Ccdc188F6WEU2 A130006I12Rik-201ENSMUST00000091396 408 ntBASIC17.72■□□□□ 0.43
Ccdc188F6WEU2 Gprc5c-201ENSMUST00000021071 2200 ntAPPRIS P3 TSL 1 (best) BASIC17.72■□□□□ 0.43
Ccdc188F6WEU2 Phf14-202ENSMUST00000115510 3353 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Ccdc188F6WEU2 Pbx1-206ENSMUST00000176790 1828 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Ccdc188F6WEU2 Tmem80-201ENSMUST00000026578 1800 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Ccdc188F6WEU2 Crhr1-201ENSMUST00000093925 2460 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Ccdc188F6WEU2 Trim47-202ENSMUST00000106441 2192 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
Ccdc188F6WEU2 Fbxo17-203ENSMUST00000108279 1563 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Ccdc188F6WEU2 Sirt1-203ENSMUST00000120239 4430 ntAPPRIS P3 TSL 5 BASIC17.71■□□□□ 0.43
Ccdc188F6WEU2 4933433G15Rik-201ENSMUST00000180533 1481 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Ccdc188F6WEU2 Sstr1-201ENSMUST00000044299 2014 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Ccdc188F6WEU2 Ap1s1-201ENSMUST00000111080 1353 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Ccdc188F6WEU2 Dnajb2-208ENSMUST00000188346 1823 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Ccdc188F6WEU2 Tmem217-201ENSMUST00000114683 904 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Ccdc188F6WEU2 Gm27321-201ENSMUST00000185021 205 ntBASIC17.71■□□□□ 0.43
Ccdc188F6WEU2 Gm37280-201ENSMUST00000194583 375 ntTSL 3 BASIC17.71■□□□□ 0.43
Ccdc188F6WEU2 AC151286.1-201ENSMUST00000198489 145 ntBASIC17.71■□□□□ 0.43
Ccdc188F6WEU2 Gm44081-201ENSMUST00000204406 643 ntTSL 3 BASIC17.71■□□□□ 0.43
Ccdc188F6WEU2 2310001H17Rik-206ENSMUST00000205051 676 ntTSL 3 BASIC17.71■□□□□ 0.43
Ccdc188F6WEU2 Aga-201ENSMUST00000033920 1181 ntAPPRIS P3 TSL 1 (best) BASIC17.71■□□□□ 0.43
Ccdc188F6WEU2 Fam26f-201ENSMUST00000062784 1094 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Ccdc188F6WEU2 Fmr1nb-201ENSMUST00000069731 799 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
Ccdc188F6WEU2 Cdkn2d-201ENSMUST00000086374 1264 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Ccdc188F6WEU2 Pptc7-201ENSMUST00000053426 4644 ntAPPRIS P2 TSL 1 (best) BASIC17.71■□□□□ 0.43
Ccdc188F6WEU2 Sox18-201ENSMUST00000054491 1620 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Ccdc188F6WEU2 Rnf19b-206ENSMUST00000168461 2532 ntAPPRIS P2 TSL 5 BASIC17.71■□□□□ 0.43
Ccdc188F6WEU2 Fnbp1-205ENSMUST00000113552 1910 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Ccdc188F6WEU2 Gfi1-202ENSMUST00000065478 2639 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
Ccdc188F6WEU2 Kif27-203ENSMUST00000225388 5121 ntAPPRIS P1 BASIC17.7■□□□□ 0.42
Ccdc188F6WEU2 Dnajc2-202ENSMUST00000115192 1132 ntTSL 2 BASIC17.7■□□□□ 0.42
Ccdc188F6WEU2 Gm27867-201ENSMUST00000184778 125 ntBASIC17.7■□□□□ 0.42
Ccdc188F6WEU2 Gm16845-202ENSMUST00000216270 567 ntTSL 2 BASIC17.7■□□□□ 0.42
Ccdc188F6WEU2 Prm2-201ENSMUST00000037996 621 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Ccdc188F6WEU2 Nudt16l1-201ENSMUST00000050881 1269 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Ccdc188F6WEU2 Trim9-208ENSMUST00000221370 2393 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Ccdc188F6WEU2 Shd-201ENSMUST00000044216 1546 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
Ccdc188F6WEU2 Rdx-202ENSMUST00000061352 1502 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Ccdc188F6WEU2 Ascl4-202ENSMUST00000170396 2016 ntAPPRIS P1 BASIC17.7■□□□□ 0.42
Ccdc188F6WEU2 1700028E10Rik-201ENSMUST00000181114 2034 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Ccdc188F6WEU2 Gtf2h4-201ENSMUST00000001565 1679 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Ccdc188F6WEU2 Atp2b2-208ENSMUST00000205052 5658 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Ccdc188F6WEU2 Chsy1-201ENSMUST00000036372 4176 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Ccdc188F6WEU2 Aire-213ENSMUST00000148469 1618 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Ccdc188F6WEU2 Fam20b-202ENSMUST00000122424 4532 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
Ccdc188F6WEU2 Stx3-202ENSMUST00000069285 2810 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Ccdc188F6WEU2 Ttc39c-201ENSMUST00000025294 2571 ntAPPRIS P2 TSL 1 (best) BASIC17.69■□□□□ 0.42
Ccdc188F6WEU2 Senp6-201ENSMUST00000037484 5111 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
Ccdc188F6WEU2 Gm11750-201ENSMUST00000146016 583 ntTSL 5 BASIC17.69■□□□□ 0.42
Ccdc188F6WEU2 Acaa1a-203ENSMUST00000175743 1219 ntTSL 5 BASIC17.69■□□□□ 0.42
Ccdc188F6WEU2 Acaa1a-207ENSMUST00000176397 996 ntTSL 5 BASIC17.69■□□□□ 0.42
Ccdc188F6WEU2 Smim22-208ENSMUST00000185147 399 ntAPPRIS ALT2 TSL 2 BASIC17.69■□□□□ 0.42
Ccdc188F6WEU2 AC125350.1-201ENSMUST00000225115 903 ntBASIC17.69■□□□□ 0.42
Ccdc188F6WEU2 Mrpl17-201ENSMUST00000033170 1028 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Ccdc188F6WEU2 Hist1h1a-201ENSMUST00000055770 741 ntAPPRIS P1 BASIC17.69■□□□□ 0.42
Ccdc188F6WEU2 6030408B16Rik-201ENSMUST00000071328 1155 ntAPPRIS ALT2 TSL 5 BASIC17.69■□□□□ 0.42
Ccdc188F6WEU2 Mknk2-205ENSMUST00000200082 3439 ntAPPRIS P2 TSL 1 (best) BASIC17.69■□□□□ 0.42
Ccdc188F6WEU2 Htra3-201ENSMUST00000087629 2750 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Ccdc188F6WEU2 Enoph1-201ENSMUST00000031268 1420 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Ccdc188F6WEU2 Ero1lb-203ENSMUST00000221560 1964 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Ccdc188F6WEU2 Myd88-201ENSMUST00000035092 1960 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Ccdc188F6WEU2 Trmt61a-202ENSMUST00000168338 2131 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
Ccdc188F6WEU2 Kcnj12-202ENSMUST00000089184 2291 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
Ccdc188F6WEU2 Rnpep-201ENSMUST00000074357 2171 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Ccdc188F6WEU2 Mfn1-201ENSMUST00000091257 4562 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Ccdc188F6WEU2 Fgfr3-202ENSMUST00000087820 2630 ntAPPRIS ALT2 TSL 5 BASIC17.68■□□□□ 0.42
Ccdc188F6WEU2 Gse1-203ENSMUST00000120493 4610 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Ccdc188F6WEU2 Cenpw-201ENSMUST00000099985 1532 ntAPPRIS P2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Ccdc188F6WEU2 Lmtk3-202ENSMUST00000120005 4997 ntAPPRIS P2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Ccdc188F6WEU2 Klk6-202ENSMUST00000107967 1172 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Ccdc188F6WEU2 Tmsb4x-201ENSMUST00000112172 768 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Ccdc188F6WEU2 Gm15920-201ENSMUST00000118998 402 ntBASIC17.68■□□□□ 0.42
Ccdc188F6WEU2 Ndufv1-202ENSMUST00000128787 1436 ntAPPRIS ALT2 TSL 5 BASIC17.68■□□□□ 0.42
Ccdc188F6WEU2 1810062O18Rik-203ENSMUST00000129237 647 ntTSL 5 BASIC17.68■□□□□ 0.42
Ccdc188F6WEU2 Rasd2-201ENSMUST00000132133 1299 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Ccdc188F6WEU2 Timm13-201ENSMUST00000020440 1225 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Ccdc188F6WEU2 Jak2-202ENSMUST00000065796 5030 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
Ccdc188F6WEU2 Lpar3-201ENSMUST00000039164 2464 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Ccdc188F6WEU2 Cpeb3-205ENSMUST00000126781 2095 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Ccdc188F6WEU2 Gm13830-202ENSMUST00000144202 381 ntTSL 3 BASIC17.67■□□□□ 0.42
Ccdc188F6WEU2 Gm44662-201ENSMUST00000206970 412 ntTSL 5 BASIC17.67■□□□□ 0.42
Ccdc188F6WEU2 Psma5-201ENSMUST00000090569 1239 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Ccdc188F6WEU2 B3gat2-203ENSMUST00000144602 1488 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Ccdc188F6WEU2 Prss54-205ENSMUST00000213096 1501 ntAPPRIS P3 TSL 5 BASIC17.67■□□□□ 0.42
Ccdc188F6WEU2 Tgif1-209ENSMUST00000166395 1714 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Ccdc188F6WEU2 Homer1-207ENSMUST00000109494 2468 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Ccdc188F6WEU2 Mcmbp-202ENSMUST00000119081 2347 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Ccdc188F6WEU2 Sh3glb1-205ENSMUST00000199854 1416 ntTSL 5 BASIC17.66■□□□□ 0.42
Ccdc188F6WEU2 Habp4-201ENSMUST00000021929 2564 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Ccdc188F6WEU2 Sigmar1-201ENSMUST00000059354 1640 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Ccdc188F6WEU2 Ncmap-205ENSMUST00000105860 2000 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Ccdc188F6WEU2 Papd7-202ENSMUST00000198607 4750 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Ccdc188F6WEU2 Gm12216-201ENSMUST00000117316 1152 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Ccdc188F6WEU2 Gm17178-201ENSMUST00000163273 357 ntTSL 5 BASIC17.66■□□□□ 0.42
Ccdc188F6WEU2 Sbsn-202ENSMUST00000182227 432 ntAPPRIS ALT2 TSL 5 BASIC17.66■□□□□ 0.42
Ccdc188F6WEU2 Sbsn-203ENSMUST00000182229 732 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Ccdc188F6WEU2 Gm44107-201ENSMUST00000203242 573 ntTSL 2 BASIC17.66■□□□□ 0.42
Ccdc188F6WEU2 Ap2s1-204ENSMUST00000205607 372 ntTSL 3 BASIC17.66■□□□□ 0.42
Retrieved 100 of 76,532 protein–RNA pairs in 28.3 ms