Protein–RNA interactions for Protein: F6VAN0

Atf6, Cyclic AMP-dependent transcription factor ATF-6 alpha, mousemouse

Predictions only

Length 656 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atf6F6VAN0 Rbmxl1-202ENSMUST00000211719 1622 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Atf6F6VAN0 Fcgrt-201ENSMUST00000003512 1770 ntAPPRIS P2 TSL 1 (best) BASIC17.95■□□□□ 0.46
Atf6F6VAN0 F2rl3-201ENSMUST00000058099 1751 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Atf6F6VAN0 K230015D01Rik-201ENSMUST00000211969 1516 ntBASIC17.95■□□□□ 0.46
Atf6F6VAN0 Josd2-204ENSMUST00000118628 864 ntAPPRIS P1 TSL 2 BASIC17.95■□□□□ 0.46
Atf6F6VAN0 Gm3331-201ENSMUST00000183423 1017 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Atf6F6VAN0 Hsbp1-202ENSMUST00000212468 638 ntAPPRIS P1 TSL 2 BASIC17.95■□□□□ 0.46
Atf6F6VAN0 Josd2-201ENSMUST00000035844 930 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Atf6F6VAN0 4930505A04Rik-201ENSMUST00000041763 904 ntAPPRIS P1 TSL 2 BASIC17.95■□□□□ 0.46
Atf6F6VAN0 Bcs1l-202ENSMUST00000113732 1679 ntAPPRIS P1 TSL 5 BASIC17.95■□□□□ 0.46
Atf6F6VAN0 Tbx2-201ENSMUST00000000095 3626 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Atf6F6VAN0 Prdm6-201ENSMUST00000091900 2601 ntAPPRIS P2 TSL 1 (best) BASIC17.95■□□□□ 0.46
Atf6F6VAN0 Haus8-201ENSMUST00000035960 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
Atf6F6VAN0 Gas2-201ENSMUST00000051912 2181 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Atf6F6VAN0 Col4a3bp-201ENSMUST00000077672 2746 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Atf6F6VAN0 Bean1-203ENSMUST00000167633 3275 ntAPPRIS ALT2 TSL 5 BASIC17.94■□□□□ 0.46
Atf6F6VAN0 Arhgef17-204ENSMUST00000209041 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
Atf6F6VAN0 Sept4-205ENSMUST00000107962 1678 ntAPPRIS ALT1 TSL 5 BASIC17.94■□□□□ 0.46
Atf6F6VAN0 Gata5os-201ENSMUST00000069943 1678 ntTSL 2 BASIC17.94■□□□□ 0.46
Atf6F6VAN0 Ttc39a-201ENSMUST00000064129 2356 ntAPPRIS P3 TSL 1 (best) BASIC17.94■□□□□ 0.46
Atf6F6VAN0 Abhd10-201ENSMUST00000066983 2848 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Atf6F6VAN0 Nsmf-202ENSMUST00000074422 2824 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Atf6F6VAN0 Arl6ip4-202ENSMUST00000122394 982 ntAPPRIS ALT2 TSL 5 BASIC17.94■□□□□ 0.46
Atf6F6VAN0 Fev-202ENSMUST00000159232 928 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Atf6F6VAN0 1700007L15Rik-201ENSMUST00000180923 737 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Atf6F6VAN0 Mir8112-201ENSMUST00000184382 131 ntBASIC17.94■□□□□ 0.46
Atf6F6VAN0 Rabac1-203ENSMUST00000205871 986 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Atf6F6VAN0 Trappc6a-201ENSMUST00000002112 785 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Atf6F6VAN0 Gm42417-201ENSMUST00000191849 2256 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Atf6F6VAN0 Nt5dc3-201ENSMUST00000099396 5952 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Atf6F6VAN0 Mrps23-203ENSMUST00000118784 1404 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Atf6F6VAN0 Map4k5-210ENSMUST00000171211 4334 ntTSL 2 BASIC17.94■□□□□ 0.46
Atf6F6VAN0 Txnl4b-201ENSMUST00000034159 1890 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Atf6F6VAN0 Camsap2-201ENSMUST00000048309 7823 ntAPPRIS P3 TSL 5 BASIC17.94■□□□□ 0.46
Atf6F6VAN0 Gmcl1-201ENSMUST00000001185 2949 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Atf6F6VAN0 Map3k10-201ENSMUST00000036453 3682 ntAPPRIS P2 TSL 1 (best) BASIC17.94■□□□□ 0.46
Atf6F6VAN0 Tspan4-201ENSMUST00000026585 1466 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Atf6F6VAN0 Nos1ap-207ENSMUST00000161966 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
Atf6F6VAN0 Chpt1-201ENSMUST00000020253 3898 ntAPPRIS P3 TSL 1 (best) BASIC17.94■□□□□ 0.46
Atf6F6VAN0 Enpp1-202ENSMUST00000105520 6777 ntAPPRIS P3 TSL 1 (best) BASIC17.93■□□□□ 0.46
Atf6F6VAN0 Gm16863-201ENSMUST00000181476 2431 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Atf6F6VAN0 Ubac2-201ENSMUST00000039803 2139 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Atf6F6VAN0 Tbx20-202ENSMUST00000166018 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
Atf6F6VAN0 Larp1b-206ENSMUST00000191872 1505 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
Atf6F6VAN0 Mroh5-201ENSMUST00000071419 2766 ntAPPRIS P2 TSL 1 (best) BASIC17.93■□□□□ 0.46
Atf6F6VAN0 Ust-201ENSMUST00000061601 4228 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Atf6F6VAN0 Artn-202ENSMUST00000097913 1568 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Atf6F6VAN0 Gm37519-201ENSMUST00000191687 2210 ntBASIC17.93■□□□□ 0.46
Atf6F6VAN0 Ube2z-201ENSMUST00000100528 3997 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Atf6F6VAN0 Phtf1-203ENSMUST00000090685 3006 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Atf6F6VAN0 Rbm39-202ENSMUST00000109584 667 ntTSL 5 BASIC17.93■□□□□ 0.46
Atf6F6VAN0 Gm11643-201ENSMUST00000119578 864 ntBASIC17.93■□□□□ 0.46
Atf6F6VAN0 Arl4aos-201ENSMUST00000135883 748 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Atf6F6VAN0 Aldh1a3-204ENSMUST00000174215 1066 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Atf6F6VAN0 Igsf23-201ENSMUST00000043440 1908 ntAPPRIS P2 TSL 1 (best) BASIC17.93■□□□□ 0.46
Atf6F6VAN0 Med9-201ENSMUST00000081980 1920 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Atf6F6VAN0 Hoxb4-201ENSMUST00000049241 2566 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Atf6F6VAN0 Hpn-209ENSMUST00000168884 1762 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Atf6F6VAN0 Gprin1-202ENSMUST00000135343 4248 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Atf6F6VAN0 Apba3-201ENSMUST00000057798 2106 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Atf6F6VAN0 Slc35e1-202ENSMUST00000152080 4383 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Atf6F6VAN0 Wipf1-201ENSMUST00000094681 4728 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Atf6F6VAN0 Myh7b-201ENSMUST00000092995 6163 ntAPPRIS P1 TSL 5 BASIC17.92■□□□□ 0.46
Atf6F6VAN0 Arid1a-205ENSMUST00000145664 8187 ntAPPRIS ALT2 TSL 2 BASIC17.92■□□□□ 0.46
Atf6F6VAN0 Hrh3-202ENSMUST00000163215 1401 ntTSL 5 BASIC17.92■□□□□ 0.46
Atf6F6VAN0 4930432B10Rik-202ENSMUST00000181330 1612 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Atf6F6VAN0 Tnfaip8l2-201ENSMUST00000013851 1122 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Atf6F6VAN0 Spata3-208ENSMUST00000149469 1110 ntTSL 5 BASIC17.92■□□□□ 0.46
Atf6F6VAN0 Smim10l1-204ENSMUST00000191462 574 ntTSL 3 BASIC17.92■□□□□ 0.46
Atf6F6VAN0 Vgll2-201ENSMUST00000058347 966 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
Atf6F6VAN0 Fst-201ENSMUST00000022287 2556 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Atf6F6VAN0 Tmco4-202ENSMUST00000050949 3318 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Atf6F6VAN0 A930024E05Rik-201ENSMUST00000148466 1896 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Atf6F6VAN0 A530016L24Rik-202ENSMUST00000223266 1547 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Atf6F6VAN0 Nanp-201ENSMUST00000066640 1394 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Atf6F6VAN0 Hmbox1-203ENSMUST00000175744 1771 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Atf6F6VAN0 Ptpa-202ENSMUST00000113601 1838 ntTSL 5 BASIC17.91■□□□□ 0.46
Atf6F6VAN0 Aida-206ENSMUST00000193625 1810 ntTSL 3 BASIC17.91■□□□□ 0.46
Atf6F6VAN0 Serbp1-203ENSMUST00000203077 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Atf6F6VAN0 Pigp-203ENSMUST00000113910 966 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Atf6F6VAN0 Gm15723-201ENSMUST00000139331 600 ntTSL 3 BASIC17.91■□□□□ 0.46
Atf6F6VAN0 1700101I19Rik-202ENSMUST00000186712 510 ntBASIC17.91■□□□□ 0.46
Atf6F6VAN0 Gm44878-201ENSMUST00000205812 1295 ntBASIC17.91■□□□□ 0.46
Atf6F6VAN0 Tmem192-201ENSMUST00000026595 1122 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Atf6F6VAN0 Tcf7l2-203ENSMUST00000111646 2839 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Atf6F6VAN0 Acadvl-201ENSMUST00000018718 2020 ntAPPRIS ALT2 TSL 5 BASIC17.91■□□□□ 0.46
Atf6F6VAN0 Mtcp1-201ENSMUST00000033542 1592 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Atf6F6VAN0 AW011738-201ENSMUST00000105140 1848 ntAPPRIS P1 BASIC17.91■□□□□ 0.46
Atf6F6VAN0 Pitx3-201ENSMUST00000026259 1380 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Atf6F6VAN0 Proser2-201ENSMUST00000054254 2061 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Atf6F6VAN0 Ric3-202ENSMUST00000120876 1633 ntAPPRIS ALT1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Atf6F6VAN0 Pdap1-201ENSMUST00000031627 2353 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Atf6F6VAN0 Ache-201ENSMUST00000024099 2186 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Atf6F6VAN0 Eif2b4-201ENSMUST00000077693 2025 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Atf6F6VAN0 Ssu72-202ENSMUST00000105595 874 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Atf6F6VAN0 Romo1-202ENSMUST00000109597 550 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Atf6F6VAN0 Gtf2a2-204ENSMUST00000119905 622 ntTSL 2 BASIC17.9■□□□□ 0.46
Atf6F6VAN0 Gm18666-201ENSMUST00000190039 958 ntBASIC17.9■□□□□ 0.46
Atf6F6VAN0 Gm45337-201ENSMUST00000210537 1267 ntAPPRIS P1 BASIC17.9■□□□□ 0.46
Atf6F6VAN0 Tmem42-202ENSMUST00000213514 631 ntTSL 3 BASIC17.9■□□□□ 0.46
Retrieved 100 of 76,532 protein–RNA pairs in 26.5 ms