Protein–RNA interactions for Protein: F6V035

Ccdc149, Coiled-coil domain-containing 149, mousemouse

Predictions only

Length 524 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc149F6V035 Bin2-204ENSMUST00000182775 1908 ntTSL 5 BASIC17.74■□□□□ 0.43
Ccdc149F6V035 Cntln-201ENSMUST00000047023 5528 ntAPPRIS ALT2 TSL 5 BASIC17.74■□□□□ 0.43
Ccdc149F6V035 Srsf4-202ENSMUST00000053819 2257 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Ccdc149F6V035 Map3k7cl-201ENSMUST00000026700 1652 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Ccdc149F6V035 F2rl3-201ENSMUST00000058099 1751 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Ccdc149F6V035 Gm22697-201ENSMUST00000175194 63 ntBASIC17.74■□□□□ 0.43
Ccdc149F6V035 4930544D05Rik-204ENSMUST00000180052 755 ntAPPRIS ALT2 TSL 5 BASIC17.74■□□□□ 0.43
Ccdc149F6V035 Gm42477-201ENSMUST00000202427 469 ntTSL 3 BASIC17.74■□□□□ 0.43
Ccdc149F6V035 Gm9731-201ENSMUST00000209480 747 ntBASIC17.74■□□□□ 0.43
Ccdc149F6V035 Gng11-201ENSMUST00000031670 919 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Ccdc149F6V035 Lce1h-201ENSMUST00000051521 706 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Ccdc149F6V035 Eif1b-201ENSMUST00000007139 1035 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Ccdc149F6V035 BC048679-201ENSMUST00000073406 522 ntAPPRIS P3 TSL 1 (best) BASIC17.74■□□□□ 0.43
Ccdc149F6V035 Wdsub1-201ENSMUST00000028368 2072 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Ccdc149F6V035 Pde1b-201ENSMUST00000023132 3218 ntAPPRIS P2 TSL 1 (best) BASIC17.74■□□□□ 0.43
Ccdc149F6V035 Smarca4-201ENSMUST00000034707 6354 ntAPPRIS P3 TSL 1 (best) BASIC17.74■□□□□ 0.43
Ccdc149F6V035 Cops8-201ENSMUST00000036153 2287 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Ccdc149F6V035 E2f1-202ENSMUST00000103145 2732 ntAPPRIS P3 TSL 1 (best) BASIC17.74■□□□□ 0.43
Ccdc149F6V035 Tpbgl-201ENSMUST00000178124 3022 ntAPPRIS P1 BASIC17.74■□□□□ 0.43
Ccdc149F6V035 Mtch2-205ENSMUST00000136872 2596 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Ccdc149F6V035 9030624G23Rik-201ENSMUST00000101538 2245 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Ccdc149F6V035 Shisa7-203ENSMUST00000119433 3481 ntAPPRIS P2 TSL 1 (best) BASIC17.73■□□□□ 0.43
Ccdc149F6V035 Sbf1-201ENSMUST00000123791 6190 ntAPPRIS P3 TSL 1 (best) BASIC17.73■□□□□ 0.43
Ccdc149F6V035 Ism1-201ENSMUST00000099307 2944 ntTSL 5 BASIC17.73■□□□□ 0.43
Ccdc149F6V035 Picalm-206ENSMUST00000207484 8209 ntAPPRIS P3 TSL 1 (best) BASIC17.73■□□□□ 0.43
Ccdc149F6V035 Wnt10a-201ENSMUST00000006718 2468 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Ccdc149F6V035 Arhgef1-204ENSMUST00000117796 3508 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
Ccdc149F6V035 Cdk5r2-201ENSMUST00000160379 2799 ntAPPRIS P1 BASIC17.73■□□□□ 0.43
Ccdc149F6V035 Gm15138-201ENSMUST00000151778 379 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Ccdc149F6V035 A730015C16Rik-201ENSMUST00000164855 1221 ntAPPRIS P1 BASIC17.73■□□□□ 0.43
Ccdc149F6V035 Gm4217-201ENSMUST00000182243 1002 ntBASIC17.73■□□□□ 0.43
Ccdc149F6V035 Dusp13-213ENSMUST00000184703 902 ntAPPRIS ALT1 TSL 5 BASIC17.73■□□□□ 0.43
Ccdc149F6V035 Rpl39l-201ENSMUST00000044103 805 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Ccdc149F6V035 Paox-202ENSMUST00000097967 1024 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Ccdc149F6V035 Lrch4-204ENSMUST00000176667 2209 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
Ccdc149F6V035 Camsap2-201ENSMUST00000048309 7823 ntAPPRIS P3 TSL 5 BASIC17.73■□□□□ 0.43
Ccdc149F6V035 Dock9-202ENSMUST00000100299 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
Ccdc149F6V035 Nck2-201ENSMUST00000086421 2772 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Ccdc149F6V035 Htra3-202ENSMUST00000114233 1901 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Ccdc149F6V035 Gas2-203ENSMUST00000107591 2232 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Ccdc149F6V035 Fam126a-202ENSMUST00000101513 1679 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Ccdc149F6V035 Cldn18-203ENSMUST00000131922 860 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Ccdc149F6V035 Tppp3-201ENSMUST00000014990 1127 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Ccdc149F6V035 Flg-203ENSMUST00000178695 777 ntAPPRIS P5 BASIC17.72■□□□□ 0.43
Ccdc149F6V035 Cacul1-201ENSMUST00000081790 5790 ntAPPRIS P3 TSL 1 (best) BASIC17.72■□□□□ 0.43
Ccdc149F6V035 Rap1b-201ENSMUST00000064667 2724 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Ccdc149F6V035 Gabra4-205ENSMUST00000199357 2407 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
Ccdc149F6V035 Tmem81-201ENSMUST00000058167 1742 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Ccdc149F6V035 Lmo4-203ENSMUST00000121796 1417 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Ccdc149F6V035 Def6-201ENSMUST00000002327 2277 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Ccdc149F6V035 Sapcd2-202ENSMUST00000100323 1761 ntAPPRIS ALT2 TSL 2 BASIC17.71■□□□□ 0.43
Ccdc149F6V035 Eif1a-202ENSMUST00000168382 1750 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Ccdc149F6V035 Hoxb3os-201ENSMUST00000131275 2315 ntTSL 3 BASIC17.71■□□□□ 0.43
Ccdc149F6V035 Hnrnpul2-201ENSMUST00000096753 5726 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Ccdc149F6V035 Acvr1c-204ENSMUST00000112608 1497 ntAPPRIS ALT2 TSL 5 BASIC17.71■□□□□ 0.43
Ccdc149F6V035 Azi2-207ENSMUST00000134433 2499 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Ccdc149F6V035 Bcor-206ENSMUST00000124033 6785 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
Ccdc149F6V035 Trmt11-201ENSMUST00000019927 2359 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Ccdc149F6V035 AA414768-201ENSMUST00000121924 1257 ntBASIC17.71■□□□□ 0.43
Ccdc149F6V035 Il3ra-202ENSMUST00000223589 738 ntBASIC17.71■□□□□ 0.43
Ccdc149F6V035 Pfdn6-201ENSMUST00000025163 807 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Ccdc149F6V035 Hoxa6-201ENSMUST00000062829 874 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Ccdc149F6V035 Gm5464-201ENSMUST00000100453 2156 ntAPPRIS P1 BASIC17.71■□□□□ 0.43
Ccdc149F6V035 Runx1t1-201ENSMUST00000006761 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
Ccdc149F6V035 Syndig1-202ENSMUST00000109935 2050 ntAPPRIS P1 TSL 5 BASIC17.71■□□□□ 0.43
Ccdc149F6V035 Rab11fip3-202ENSMUST00000120691 5103 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
Ccdc149F6V035 Grb14-201ENSMUST00000028252 1986 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Ccdc149F6V035 Gm15645-201ENSMUST00000131504 2208 ntTSL 5 BASIC17.71■□□□□ 0.43
Ccdc149F6V035 Hpn-209ENSMUST00000168884 1762 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Ccdc149F6V035 Praf2-201ENSMUST00000033489 1339 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.42
Ccdc149F6V035 Sept4-205ENSMUST00000107962 1678 ntAPPRIS ALT1 TSL 5 BASIC17.71■□□□□ 0.42
Ccdc149F6V035 Spata2l-201ENSMUST00000098327 2380 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.42
Ccdc149F6V035 Tmem127-201ENSMUST00000035871 4811 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Ccdc149F6V035 Trnt1-202ENSMUST00000113247 1934 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Ccdc149F6V035 Bcl9l-206ENSMUST00000220303 5760 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
Ccdc149F6V035 Slc25a35-202ENSMUST00000102606 1828 ntAPPRIS P2 TSL 1 (best) BASIC17.7■□□□□ 0.42
Ccdc149F6V035 Papola-212ENSMUST00000168186 2436 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Ccdc149F6V035 Fndc4-202ENSMUST00000172435 2333 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Ccdc149F6V035 Tmem131-201ENSMUST00000027290 6546 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Ccdc149F6V035 Marcks-201ENSMUST00000092584 4048 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Ccdc149F6V035 Efcab11-207ENSMUST00000223114 1122 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
Ccdc149F6V035 Pigf-201ENSMUST00000024957 988 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Ccdc149F6V035 Spsb2-202ENSMUST00000052727 1219 ntAPPRIS P1 TSL 3 BASIC17.7■□□□□ 0.42
Ccdc149F6V035 Asap2-204ENSMUST00000101562 5552 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
Ccdc149F6V035 Surf4-201ENSMUST00000015011 3281 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Ccdc149F6V035 Eif4g3-201ENSMUST00000058133 2663 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Ccdc149F6V035 Tbc1d13-201ENSMUST00000044556 3595 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Ccdc149F6V035 Tmem47-203ENSMUST00000171953 1801 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Ccdc149F6V035 Prmt6-201ENSMUST00000106567 2450 ntAPPRIS P1 BASIC17.7■□□□□ 0.42
Ccdc149F6V035 Camk2b-202ENSMUST00000019133 2223 ntTSL 5 BASIC17.7■□□□□ 0.42
Ccdc149F6V035 Gm35558-201ENSMUST00000222675 2219 ntBASIC17.7■□□□□ 0.42
Ccdc149F6V035 Gm10461-201ENSMUST00000202073 4786 ntBASIC17.7■□□□□ 0.42
Ccdc149F6V035 Cyb5r4-201ENSMUST00000168529 2644 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Ccdc149F6V035 Shkbp1-201ENSMUST00000003857 2358 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Ccdc149F6V035 Pex14-201ENSMUST00000103217 2006 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Ccdc149F6V035 Ubr3-202ENSMUST00000112251 8081 ntAPPRIS ALT2 TSL 5 BASIC17.69■□□□□ 0.42
Ccdc149F6V035 Myrip-201ENSMUST00000048121 4906 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Ccdc149F6V035 Tnk1-202ENSMUST00000108626 1798 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Ccdc149F6V035 Dlgap1-209ENSMUST00000140728 2173 ntAPPRIS ALT2 TSL 5 BASIC17.69■□□□□ 0.42
Ccdc149F6V035 Chka-201ENSMUST00000025760 2319 ntAPPRIS ALT2 TSL 5 BASIC17.69■□□□□ 0.42
Retrieved 100 of 76,532 protein–RNA pairs in 27.9 ms