Protein–RNA interactions for Protein: E9PZP8

Herc1, HECT and RLD domain-containing E3 ubiquitin protein ligase family member 1, mousemouse

Predictions only

Length 4,859 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Herc1E9PZP8 Hfe2-201ENSMUST00000049208 2028 ntAPPRIS P1 TSL 1 (best) BASIC9.87□□□□□ -0.83
Herc1E9PZP8 Casp16-ps-201ENSMUST00000088673 531 ntAPPRIS P1 TSL 5 BASIC9.87□□□□□ -0.83
Herc1E9PZP8 Eml2-202ENSMUST00000117338 2765 ntAPPRIS ALT2 TSL 5 BASIC9.87□□□□□ -0.83
Herc1E9PZP8 Stam2-202ENSMUST00000127316 1928 ntTSL 1 (best) BASIC9.87□□□□□ -0.83
Herc1E9PZP8 2610307P16Rik-205ENSMUST00000148885 1870 ntTSL 1 (best) BASIC9.87□□□□□ -0.83
Herc1E9PZP8 Kcnn1-207ENSMUST00000212509 1608 ntAPPRIS ALT2 TSL 5 BASIC9.87□□□□□ -0.83
Herc1E9PZP8 Krt23-201ENSMUST00000006969 1565 ntAPPRIS P1 TSL 1 (best) BASIC9.87□□□□□ -0.83
Herc1E9PZP8 Gm8909-201ENSMUST00000040467 1357 ntAPPRIS P2 TSL 1 (best) BASIC9.87□□□□□ -0.83
Herc1E9PZP8 Gm12428-201ENSMUST00000119844 727 ntBASIC9.87□□□□□ -0.83
Herc1E9PZP8 Gm20412-201ENSMUST00000173249 633 ntTSL 5 BASIC9.87□□□□□ -0.83
Herc1E9PZP8 Cyb561d2-205ENSMUST00000195235 1162 ntAPPRIS P1 TSL 1 (best) BASIC9.87□□□□□ -0.83
Herc1E9PZP8 Vsig2-206ENSMUST00000215957 851 ntTSL 1 (best) BASIC9.87□□□□□ -0.83
Herc1E9PZP8 Ftl1-ps1-202ENSMUST00000222435 938 ntAPPRIS P1 BASIC9.87□□□□□ -0.83
Herc1E9PZP8 Mrps36-202ENSMUST00000078573 571 ntAPPRIS ALT1 TSL 1 (best) BASIC9.87□□□□□ -0.83
Herc1E9PZP8 Trafd1-201ENSMUST00000042312 2503 ntAPPRIS P4 TSL 1 (best) BASIC9.87□□□□□ -0.83
Herc1E9PZP8 Sox18-201ENSMUST00000054491 1620 ntAPPRIS P1 TSL 1 (best) BASIC9.87□□□□□ -0.83
Herc1E9PZP8 Tbcb-201ENSMUST00000006254 1416 ntAPPRIS P1 TSL 1 (best) BASIC9.87□□□□□ -0.83
Herc1E9PZP8 Nkx2-2-201ENSMUST00000067075 2120 ntAPPRIS P1 TSL 1 (best) BASIC9.87□□□□□ -0.83
Herc1E9PZP8 Klhdc3-202ENSMUST00000165007 1973 ntAPPRIS P1 TSL 1 (best) BASIC9.87□□□□□ -0.83
Herc1E9PZP8 Gm16194-204ENSMUST00000141797 475 ntTSL 3 BASIC9.87□□□□□ -0.83
Herc1E9PZP8 Egfl7-216ENSMUST00000174211 1163 ntAPPRIS P4 TSL 1 (best) BASIC9.87□□□□□ -0.83
Herc1E9PZP8 Mrpl20-201ENSMUST00000030942 764 ntAPPRIS P1 TSL 1 (best) BASIC9.87□□□□□ -0.83
Herc1E9PZP8 Nmnat3-202ENSMUST00000112937 1898 ntTSL 1 (best) BASIC9.87□□□□□ -0.83
Herc1E9PZP8 Cldn11-201ENSMUST00000046174 1870 ntAPPRIS P1 TSL 1 (best) BASIC9.87□□□□□ -0.83
Herc1E9PZP8 St3gal3-201ENSMUST00000030263 2549 ntAPPRIS P1 TSL 1 (best) BASIC9.86□□□□□ -0.83
Herc1E9PZP8 Dmtn-209ENSMUST00000228295 2572 ntBASIC9.86□□□□□ -0.83
Herc1E9PZP8 Vps25-203ENSMUST00000100414 1220 ntTSL 1 (best) BASIC9.86□□□□□ -0.83
Herc1E9PZP8 Gm13401-201ENSMUST00000117074 291 ntBASIC9.86□□□□□ -0.83
Herc1E9PZP8 Ccdc169-203ENSMUST00000118963 740 ntTSL 3 BASIC9.86□□□□□ -0.83
Herc1E9PZP8 Gm7230-201ENSMUST00000173026 815 ntBASIC9.86□□□□□ -0.83
Herc1E9PZP8 Pyy-201ENSMUST00000017455 555 ntAPPRIS P3 TSL 1 (best) BASIC9.86□□□□□ -0.83
Herc1E9PZP8 Gm18187-201ENSMUST00000196476 984 ntBASIC9.86□□□□□ -0.83
Herc1E9PZP8 Ptcra-201ENSMUST00000041012 1283 ntAPPRIS P1 TSL 1 (best) BASIC9.86□□□□□ -0.83
Herc1E9PZP8 Ccdc169-202ENSMUST00000061099 887 ntAPPRIS P1 TSL 5 BASIC9.86□□□□□ -0.83
Herc1E9PZP8 Snx20-201ENSMUST00000034087 1699 ntAPPRIS P1 TSL 1 (best) BASIC9.86□□□□□ -0.83
Herc1E9PZP8 Iqcd-202ENSMUST00000094391 1673 ntAPPRIS P2 TSL 1 (best) BASIC9.86□□□□□ -0.83
Herc1E9PZP8 4930524B15Rik-201ENSMUST00000102829 2000 ntAPPRIS P1 TSL 1 (best) BASIC9.86□□□□□ -0.83
Herc1E9PZP8 Rab40c-203ENSMUST00000164982 789 ntTSL 5 BASIC9.86□□□□□ -0.83
Herc1E9PZP8 Aurkaip1-201ENSMUST00000084097 1159 ntAPPRIS P1 TSL 1 (best) BASIC9.86□□□□□ -0.83
Herc1E9PZP8 Rpl10-ps2-201ENSMUST00000098432 645 ntBASIC9.86□□□□□ -0.83
Herc1E9PZP8 Acsl3-203ENSMUST00000134566 2492 ntTSL 1 (best) BASIC9.86□□□□□ -0.83
Herc1E9PZP8 Pou2f2-206ENSMUST00000108418 1934 ntTSL 1 (best) BASIC9.86□□□□□ -0.83
Herc1E9PZP8 Ftl2-ps-201ENSMUST00000118517 552 ntBASIC9.86□□□□□ -0.83
Herc1E9PZP8 Ccer2-201ENSMUST00000178767 1054 ntAPPRIS P1 TSL 5 BASIC9.86□□□□□ -0.83
Herc1E9PZP8 AV026068-213ENSMUST00000223675 1171 ntBASIC9.86□□□□□ -0.83
Herc1E9PZP8 Rnf7-202ENSMUST00000071301 334 ntTSL 2 BASIC9.86□□□□□ -0.83
Herc1E9PZP8 6030408B16Rik-201ENSMUST00000071328 1155 ntAPPRIS ALT2 TSL 5 BASIC9.86□□□□□ -0.83
Herc1E9PZP8 Gm15590-201ENSMUST00000078419 552 ntBASIC9.86□□□□□ -0.83
Herc1E9PZP8 Gatad1-201ENSMUST00000007559 2545 ntAPPRIS P2 TSL 1 (best) BASIC9.86□□□□□ -0.83
Herc1E9PZP8 Npr3-205ENSMUST00000228603 2437 ntAPPRIS ALT2 BASIC9.86□□□□□ -0.83
Herc1E9PZP8 Pld5-202ENSMUST00000111166 1370 ntTSL 1 (best) BASIC9.86□□□□□ -0.83
Herc1E9PZP8 Eid2b-201ENSMUST00000094651 1751 ntAPPRIS P1 BASIC9.86□□□□□ -0.83
Herc1E9PZP8 Gpr137b-ps-203ENSMUST00000220758 1942 ntTSL 1 (best) BASIC9.85□□□□□ -0.83
Herc1E9PZP8 Fkbp2-202ENSMUST00000177752 627 ntAPPRIS P1 TSL 1 (best) BASIC9.85□□□□□ -0.83
Herc1E9PZP8 Gm7229-201ENSMUST00000214719 1007 ntBASIC9.85□□□□□ -0.83
Herc1E9PZP8 Cript-201ENSMUST00000024959 1184 ntAPPRIS P1 TSL 1 (best) BASIC9.85□□□□□ -0.83
Herc1E9PZP8 Syce1l-201ENSMUST00000034219 896 ntAPPRIS ALT2 TSL 1 (best) BASIC9.85□□□□□ -0.83
Herc1E9PZP8 Fkbp2-201ENSMUST00000070878 642 ntAPPRIS P1 TSL 1 (best) BASIC9.85□□□□□ -0.83
Herc1E9PZP8 Syce1l-202ENSMUST00000095173 791 ntAPPRIS P4 TSL 1 (best) BASIC9.85□□□□□ -0.83
Herc1E9PZP8 Stk32c-201ENSMUST00000016125 2206 ntAPPRIS P1 TSL 1 (best) BASIC9.85□□□□□ -0.83
Herc1E9PZP8 Tsfm-207ENSMUST00000152054 655 ntTSL 3 BASIC9.85□□□□□ -0.83
Herc1E9PZP8 Olfr632-201ENSMUST00000098189 954 ntAPPRIS P1 BASIC9.85□□□□□ -0.83
Herc1E9PZP8 Eif2b4-202ENSMUST00000114603 1966 ntTSL 1 (best) BASIC9.85□□□□□ -0.83
Herc1E9PZP8 Gm26697-201ENSMUST00000180898 1760 ntTSL 1 (best) BASIC9.85□□□□□ -0.83
Herc1E9PZP8 Gm36972-201ENSMUST00000194000 676 ntTSL 3 BASIC9.85□□□□□ -0.83
Herc1E9PZP8 AC132467.2-202ENSMUST00000227726 559 ntBASIC9.85□□□□□ -0.83
Herc1E9PZP8 Pmm1-202ENSMUST00000071462 1059 ntTSL 1 (best) BASIC9.85□□□□□ -0.83
Herc1E9PZP8 Olfr541-201ENSMUST00000080681 1103 ntAPPRIS P1 BASIC9.85□□□□□ -0.83
Herc1E9PZP8 2900055J20Rik-201ENSMUST00000096572 723 ntAPPRIS P1 BASIC9.85□□□□□ -0.83
Herc1E9PZP8 Alg3-201ENSMUST00000045918 1451 ntAPPRIS P1 TSL 1 (best) BASIC9.85□□□□□ -0.83
Herc1E9PZP8 Snhg20-203ENSMUST00000182811 2153 ntBASIC9.85□□□□□ -0.83
Herc1E9PZP8 Ptgis-202ENSMUST00000088041 1711 ntTSL 1 (best) BASIC9.85□□□□□ -0.83
Herc1E9PZP8 9430038I01Rik-202ENSMUST00000117404 699 ntAPPRIS ALT2 TSL 5 BASIC9.85□□□□□ -0.83
Herc1E9PZP8 Gm11764-201ENSMUST00000120221 623 ntBASIC9.85□□□□□ -0.83
Herc1E9PZP8 Rgp1-203ENSMUST00000117140 1635 ntTSL 1 (best) BASIC9.85□□□□□ -0.83
Herc1E9PZP8 Agpat5-201ENSMUST00000033847 2841 ntAPPRIS ALT2 TSL 1 (best) BASIC9.85□□□□□ -0.83
Herc1E9PZP8 Plppr3-201ENSMUST00000092325 2766 ntAPPRIS P3 TSL 1 (best) BASIC9.85□□□□□ -0.83
Herc1E9PZP8 Coro6-201ENSMUST00000021190 1418 ntAPPRIS P5 TSL 1 (best) BASIC9.84□□□□□ -0.83
Herc1E9PZP8 Thap7-201ENSMUST00000100125 1248 ntAPPRIS P1 TSL 1 (best) BASIC9.84□□□□□ -0.83
Herc1E9PZP8 Gm5866-201ENSMUST00000177881 973 ntBASIC9.84□□□□□ -0.83
Herc1E9PZP8 Ffar3-202ENSMUST00000185748 1234 ntAPPRIS P1 BASIC9.84□□□□□ -0.83
Herc1E9PZP8 Swi5-201ENSMUST00000050410 775 ntAPPRIS ALT2 TSL 1 (best) BASIC9.84□□□□□ -0.83
Herc1E9PZP8 Cdkn2c-202ENSMUST00000097921 2471 ntAPPRIS P1 TSL 1 (best) BASIC9.84□□□□□ -0.83
Herc1E9PZP8 Cyp26c1-201ENSMUST00000073391 1747 ntAPPRIS P1 TSL 1 (best) BASIC9.84□□□□□ -0.83
Herc1E9PZP8 Klc3-203ENSMUST00000108458 1823 ntTSL 1 (best) BASIC9.84□□□□□ -0.83
Herc1E9PZP8 Gm42934-201ENSMUST00000196920 1345 ntBASIC9.84□□□□□ -0.83
Herc1E9PZP8 Id1-202ENSMUST00000109824 1160 ntAPPRIS ALT2 BASIC9.84□□□□□ -0.83
Herc1E9PZP8 Gm14493-201ENSMUST00000141174 543 ntTSL 5 BASIC9.84□□□□□ -0.83
Herc1E9PZP8 Gm6007-201ENSMUST00000208170 823 ntBASIC9.84□□□□□ -0.83
Herc1E9PZP8 Chmp2a-201ENSMUST00000005711 949 ntAPPRIS P1 TSL 1 (best) BASIC9.84□□□□□ -0.83
Herc1E9PZP8 Ch25h-201ENSMUST00000050562 1350 ntAPPRIS P1 BASIC9.84□□□□□ -0.83
Herc1E9PZP8 Sh3yl1-201ENSMUST00000020997 1750 ntAPPRIS P3 TSL 1 (best) BASIC9.84□□□□□ -0.83
Herc1E9PZP8 0610005C13Rik-201ENSMUST00000209416 856 ntTSL 5 BASIC9.84□□□□□ -0.83
Herc1E9PZP8 Tra2a-204ENSMUST00000204189 1777 ntAPPRIS ALT2 TSL 1 (best) BASIC9.84□□□□□ -0.83
Herc1E9PZP8 Tcp11-201ENSMUST00000042692 1984 ntAPPRIS P3 TSL 1 (best) BASIC9.84□□□□□ -0.83
Herc1E9PZP8 Tymp-201ENSMUST00000023285 2037 ntAPPRIS P1 TSL 1 (best) BASIC9.84□□□□□ -0.83
Herc1E9PZP8 Letm2-201ENSMUST00000079160 2126 ntAPPRIS P1 TSL 1 (best) BASIC9.84□□□□□ -0.83
Herc1E9PZP8 Phf14-202ENSMUST00000115510 3353 ntTSL 1 (best) BASIC9.84□□□□□ -0.83
Herc1E9PZP8 Gab2-202ENSMUST00000206791 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC9.84□□□□□ -0.83
Herc1E9PZP8 Ntf5-201ENSMUST00000058879 1963 ntAPPRIS P1 TSL 1 (best) BASIC9.84□□□□□ -0.83
Retrieved 100 of 76,532 protein–RNA pairs in 26.1 ms