Protein–RNA interactions for Protein: E9PUB3

Gm5878, Predicted gene 5878, mousemouse

Predictions only

Length 99 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm5878E9PUB3 Nsmf-202ENSMUST00000074422 2824 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Gm5878E9PUB3 Ngb-201ENSMUST00000021420 1616 ntAPPRIS P3 TSL 1 (best) BASIC13.14□□□□□ -0.31
Gm5878E9PUB3 Lat2-202ENSMUST00000077636 1717 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Gm5878E9PUB3 Atraid-201ENSMUST00000013766 966 ntAPPRIS P2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Gm5878E9PUB3 Gm19391-201ENSMUST00000196653 999 ntTSL 3 BASIC13.14□□□□□ -0.31
Gm5878E9PUB3 Mink1-205ENSMUST00000102559 4865 ntAPPRIS P4 TSL 1 (best) BASIC13.14□□□□□ -0.31
Gm5878E9PUB3 St3gal3-203ENSMUST00000106410 2225 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Gm5878E9PUB3 D1Ertd622e-204ENSMUST00000153115 3495 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Gm5878E9PUB3 Slc35g2-201ENSMUST00000093792 1590 ntAPPRIS P1 TSL 2 BASIC13.14□□□□□ -0.31
Gm5878E9PUB3 Ruvbl1-201ENSMUST00000032165 1675 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Gm5878E9PUB3 Hpn-209ENSMUST00000168884 1762 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Gm5878E9PUB3 Tle4-201ENSMUST00000052011 4555 ntAPPRIS P2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Gm5878E9PUB3 4930447C04Rik-202ENSMUST00000110489 1988 ntAPPRIS ALT2 TSL 5 BASIC13.14□□□□□ -0.31
Gm5878E9PUB3 Cacng6-202ENSMUST00000183200 1977 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Gm5878E9PUB3 AW011738-201ENSMUST00000105140 1848 ntAPPRIS P1 BASIC13.13□□□□□ -0.31
Gm5878E9PUB3 Apba3-201ENSMUST00000057798 2106 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Gm5878E9PUB3 Ankra2-203ENSMUST00000123924 2328 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Gm5878E9PUB3 Prdm6-201ENSMUST00000091900 2601 ntAPPRIS P2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Gm5878E9PUB3 Pick1-206ENSMUST00000166155 1699 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Gm5878E9PUB3 Ppan-201ENSMUST00000004203 1670 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Gm5878E9PUB3 Card10-202ENSMUST00000164826 4726 ntAPPRIS P2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Gm5878E9PUB3 4833418N02Rik-202ENSMUST00000146560 1495 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Gm5878E9PUB3 Gm26860-201ENSMUST00000181674 1489 ntTSL 5 BASIC13.13□□□□□ -0.31
Gm5878E9PUB3 Gm13401-201ENSMUST00000117074 291 ntBASIC13.13□□□□□ -0.31
Gm5878E9PUB3 Gm3331-201ENSMUST00000183423 1017 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Gm5878E9PUB3 Klf13-202ENSMUST00000183817 599 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Gm5878E9PUB3 AC122769.4-201ENSMUST00000228166 901 ntBASIC13.13□□□□□ -0.31
Gm5878E9PUB3 Slc2a8-201ENSMUST00000028129 2108 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Gm5878E9PUB3 Elac2-202ENSMUST00000101049 2884 ntAPPRIS ALT2 TSL 5 BASIC13.13□□□□□ -0.31
Gm5878E9PUB3 Trabd-206ENSMUST00000169891 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Gm5878E9PUB3 Nxnl1-201ENSMUST00000048243 2285 ntAPPRIS P1 TSL 2 BASIC13.13□□□□□ -0.31
Gm5878E9PUB3 Mmp11-201ENSMUST00000000924 2288 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Gm5878E9PUB3 Espn-206ENSMUST00000103196 1323 ntTSL 5 BASIC13.13□□□□□ -0.31
Gm5878E9PUB3 Aldh5a1-201ENSMUST00000037615 5647 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Gm5878E9PUB3 Paqr4-201ENSMUST00000024702 2507 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Gm5878E9PUB3 Hmces-202ENSMUST00000113606 1572 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Gm5878E9PUB3 Proc-201ENSMUST00000171765 1566 ntAPPRIS P1 TSL 5 BASIC13.12□□□□□ -0.31
Gm5878E9PUB3 Gm37648-201ENSMUST00000192072 2563 ntBASIC13.12□□□□□ -0.31
Gm5878E9PUB3 Gm36210-201ENSMUST00000210663 1279 ntAPPRIS P1 TSL 5 BASIC13.12□□□□□ -0.31
Gm5878E9PUB3 Gm9970-201ENSMUST00000068997 558 ntAPPRIS P1 BASIC13.12□□□□□ -0.31
Gm5878E9PUB3 Fabp3-201ENSMUST00000070532 823 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Gm5878E9PUB3 Nos1ap-207ENSMUST00000161966 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Gm5878E9PUB3 Gm16401-202ENSMUST00000197463 2074 ntBASIC13.12□□□□□ -0.31
Gm5878E9PUB3 Mag-201ENSMUST00000040548 2419 ntAPPRIS P2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Gm5878E9PUB3 Tbxas1-201ENSMUST00000003017 1990 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Gm5878E9PUB3 Shroom3-211ENSMUST00000225438 5742 ntBASIC13.12□□□□□ -0.31
Gm5878E9PUB3 Fiz1-208ENSMUST00000208944 2306 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Gm5878E9PUB3 Cacfd1-205ENSMUST00000114007 2689 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Gm5878E9PUB3 Gm26548-201ENSMUST00000181165 2029 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Gm5878E9PUB3 Ddhd2-206ENSMUST00000211688 2265 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Gm5878E9PUB3 Kank3-201ENSMUST00000048560 2641 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Gm5878E9PUB3 Mpig6b-201ENSMUST00000097337 2252 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Gm5878E9PUB3 Artn-202ENSMUST00000097913 1568 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Gm5878E9PUB3 Dcaf12l2-201ENSMUST00000115057 2885 ntAPPRIS P1 BASIC13.11□□□□□ -0.31
Gm5878E9PUB3 AI314180-201ENSMUST00000055822 1478 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Gm5878E9PUB3 Mark3-202ENSMUST00000084953 3365 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Gm5878E9PUB3 Mir155hg-202ENSMUST00000185662 1362 ntTSL 5 BASIC13.11□□□□□ -0.31
Gm5878E9PUB3 Gm10654-201ENSMUST00000098653 1633 ntBASIC13.11□□□□□ -0.31
Gm5878E9PUB3 Rab11fip3-202ENSMUST00000120691 5103 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Gm5878E9PUB3 Smim27-201ENSMUST00000129758 1044 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Gm5878E9PUB3 Cracr2b-207ENSMUST00000170879 1158 ntAPPRIS ALT2 TSL 5 BASIC13.11□□□□□ -0.31
Gm5878E9PUB3 1700003N22Rik-201ENSMUST00000194834 808 ntBASIC13.11□□□□□ -0.31
Gm5878E9PUB3 Gm2559-201ENSMUST00000201323 363 ntBASIC13.11□□□□□ -0.31
Gm5878E9PUB3 Pts-208ENSMUST00000215416 439 ntTSL 2 BASIC13.11□□□□□ -0.31
Gm5878E9PUB3 Ift74-201ENSMUST00000030311 2139 ntAPPRIS P1 TSL 5 BASIC13.11□□□□□ -0.31
Gm5878E9PUB3 Mtag2-201ENSMUST00000058665 714 ntBASIC13.11□□□□□ -0.31
Gm5878E9PUB3 Tpsb2-201ENSMUST00000069616 1081 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Gm5878E9PUB3 Fjx1-201ENSMUST00000099678 3134 ntAPPRIS P1 BASIC13.11□□□□□ -0.31
Gm5878E9PUB3 G630022F23Rik-201ENSMUST00000202923 3627 ntBASIC13.11□□□□□ -0.31
Gm5878E9PUB3 Klf3-201ENSMUST00000165536 5221 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Gm5878E9PUB3 Rtkn-201ENSMUST00000065512 2191 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Gm5878E9PUB3 Atad3a-201ENSMUST00000030903 2413 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Gm5878E9PUB3 Inpp4a-201ENSMUST00000027287 5691 ntAPPRIS P2 TSL 5 BASIC13.11□□□□□ -0.31
Gm5878E9PUB3 Atrnl1-201ENSMUST00000077282 6581 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Gm5878E9PUB3 Dock9-202ENSMUST00000100299 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Gm5878E9PUB3 Sfrp2-201ENSMUST00000029625 2003 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Gm5878E9PUB3 Snrnp48-201ENSMUST00000091641 1785 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Gm5878E9PUB3 Tia1-203ENSMUST00000095754 1789 ntAPPRIS ALT1 TSL 5 BASIC13.1□□□□□ -0.31
Gm5878E9PUB3 6430573F11Rik-202ENSMUST00000135373 2573 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Gm5878E9PUB3 Dnm1-216ENSMUST00000201494 2732 ntTSL 5 BASIC13.1□□□□□ -0.31
Gm5878E9PUB3 Wipf1-201ENSMUST00000094681 4728 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Gm5878E9PUB3 Tmem234-215ENSMUST00000173758 453 ntTSL 2 BASIC13.1□□□□□ -0.31
Gm5878E9PUB3 Gucd1-211ENSMUST00000219774 806 ntTSL 3 BASIC13.1□□□□□ -0.31
Gm5878E9PUB3 Rbks-201ENSMUST00000031018 1042 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Gm5878E9PUB3 Olfr322-201ENSMUST00000072030 984 ntAPPRIS P1 BASIC13.1□□□□□ -0.31
Gm5878E9PUB3 Rgmb-201ENSMUST00000170578 2633 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Gm5878E9PUB3 Dlgap1-206ENSMUST00000133717 2355 ntAPPRIS ALT2 TSL 5 BASIC13.1□□□□□ -0.31
Gm5878E9PUB3 Ankdd1a-201ENSMUST00000061766 1443 ntAPPRIS ALT2 TSL 5 BASIC13.1□□□□□ -0.31
Gm5878E9PUB3 Cdipt-201ENSMUST00000032920 1974 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Gm5878E9PUB3 Col15a1-201ENSMUST00000082303 5102 ntAPPRIS ALT2 TSL 2 BASIC13.1□□□□□ -0.31
Gm5878E9PUB3 Nipsnap3b-201ENSMUST00000015391 1552 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Gm5878E9PUB3 Usp48-201ENSMUST00000055131 5722 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Gm5878E9PUB3 Trabd-201ENSMUST00000081702 2439 ntAPPRIS P2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Gm5878E9PUB3 Yipf2-204ENSMUST00000213809 1883 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Gm5878E9PUB3 Misp-205ENSMUST00000219305 2569 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Gm5878E9PUB3 Gm3139-202ENSMUST00000201138 1303 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Gm5878E9PUB3 Gm3183-203ENSMUST00000202911 1303 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Gm5878E9PUB3 Gm21974-201ENSMUST00000126662 2037 ntAPPRIS P1 TSL 5 BASIC13.1□□□□□ -0.31
Gm5878E9PUB3 Rab6b-201ENSMUST00000035155 5007 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Gm5878E9PUB3 Car2-201ENSMUST00000029078 1788 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Retrieved 100 of 76,532 protein–RNA pairs in 19.3 ms