Protein–RNA interactions for Protein: B9EKX1

Ptchd4, Patched domain-containing protein 4, mousemouse

Predictions only

Length 904 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ptchd4B9EKX1 Xylt1-201ENSMUST00000032892 9020 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Ptchd4B9EKX1 Hmga1-204ENSMUST00000118570 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Ptchd4B9EKX1 Nol4l-201ENSMUST00000035346 6399 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Ptchd4B9EKX1 Dmtn-210ENSMUST00000228824 2377 ntBASIC18.8■□□□□ 0.6
Ptchd4B9EKX1 G730003C15Rik-202ENSMUST00000189096 2309 ntBASIC18.8■□□□□ 0.6
Ptchd4B9EKX1 Pagr1a-202ENSMUST00000200948 1430 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Ptchd4B9EKX1 Gm42742-205ENSMUST00000202798 1412 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Ptchd4B9EKX1 Mmp15-201ENSMUST00000034243 5135 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Ptchd4B9EKX1 Gm3488-202ENSMUST00000181562 1945 ntAPPRIS P5 TSL 5 BASIC18.8■□□□□ 0.6
Ptchd4B9EKX1 Tbc1d25-204ENSMUST00000172020 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Ptchd4B9EKX1 Wnt6-201ENSMUST00000006716 2071 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Ptchd4B9EKX1 Dab2-208ENSMUST00000160134 1374 ntAPPRIS ALT2 TSL 5 BASIC18.8■□□□□ 0.6
Ptchd4B9EKX1 Fgf11-201ENSMUST00000011285 2534 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Ptchd4B9EKX1 Bhlhe22-201ENSMUST00000026120 3344 ntAPPRIS P1 BASIC18.79■□□□□ 0.6
Ptchd4B9EKX1 Dmrt2-201ENSMUST00000053068 2347 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Ptchd4B9EKX1 Ank1-202ENSMUST00000084038 8147 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
Ptchd4B9EKX1 Dtwd2-201ENSMUST00000025383 2476 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Ptchd4B9EKX1 Rilp-201ENSMUST00000042972 1489 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Ptchd4B9EKX1 Slc25a3-201ENSMUST00000076694 1612 ntAPPRIS P2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Ptchd4B9EKX1 Shc2-201ENSMUST00000020564 3243 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
Ptchd4B9EKX1 Fmnl2-201ENSMUST00000049483 5461 ntTSL 5 BASIC18.79■□□□□ 0.6
Ptchd4B9EKX1 Six3os1-206ENSMUST00000175921 2737 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Ptchd4B9EKX1 Gm13420-201ENSMUST00000129574 1091 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
Ptchd4B9EKX1 Gm27389-201ENSMUST00000183622 195 ntBASIC18.79■□□□□ 0.6
Ptchd4B9EKX1 Gm17949-201ENSMUST00000210548 1179 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
Ptchd4B9EKX1 Gm7213-201ENSMUST00000215977 950 ntBASIC18.79■□□□□ 0.6
Ptchd4B9EKX1 Coq7-201ENSMUST00000032887 914 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Ptchd4B9EKX1 Mtnr1b-201ENSMUST00000057920 1095 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Ptchd4B9EKX1 Mrpl43-201ENSMUST00000097715 1213 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Ptchd4B9EKX1 Vangl2-203ENSMUST00000111264 2349 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Ptchd4B9EKX1 AC123834.2-201ENSMUST00000224038 2340 ntBASIC18.79■□□□□ 0.6
Ptchd4B9EKX1 Thoc3-201ENSMUST00000026990 2335 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Ptchd4B9EKX1 Larp1-203ENSMUST00000178636 6617 ntAPPRIS P2 TSL 5 BASIC18.79■□□□□ 0.6
Ptchd4B9EKX1 Tnpo2-207ENSMUST00000211601 2941 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Ptchd4B9EKX1 Shq1-204ENSMUST00000170667 1990 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Ptchd4B9EKX1 Nudt19-201ENSMUST00000040962 2298 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Ptchd4B9EKX1 Anapc5-203ENSMUST00000196640 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Ptchd4B9EKX1 Camsap3-207ENSMUST00000207712 2539 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Ptchd4B9EKX1 Timm17b-201ENSMUST00000033498 2381 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Ptchd4B9EKX1 Zfp706-201ENSMUST00000078976 4417 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Ptchd4B9EKX1 Cklf-208ENSMUST00000212433 1304 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Ptchd4B9EKX1 Paics-201ENSMUST00000031160 2482 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Ptchd4B9EKX1 Gm4675-202ENSMUST00000164755 2322 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Ptchd4B9EKX1 Prps1l3-201ENSMUST00000139049 1720 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Ptchd4B9EKX1 Mtg2-202ENSMUST00000108901 1444 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
Ptchd4B9EKX1 Mdfi-203ENSMUST00000113280 1281 ntTSL 5 BASIC18.78■□□□□ 0.6
Ptchd4B9EKX1 Hmga1-206ENSMUST00000119486 1003 ntAPPRIS P3 TSL 2 BASIC18.78■□□□□ 0.6
Ptchd4B9EKX1 Gm15545-202ENSMUST00000141011 899 ntTSL 3 BASIC18.78■□□□□ 0.6
Ptchd4B9EKX1 Gm25016-201ENSMUST00000158399 131 ntBASIC18.78■□□□□ 0.6
Ptchd4B9EKX1 Tppp3-202ENSMUST00000176419 719 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Ptchd4B9EKX1 Gm28876-201ENSMUST00000188137 703 ntTSL 3 BASIC18.78■□□□□ 0.6
Ptchd4B9EKX1 Il17a-201ENSMUST00000027061 1171 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Ptchd4B9EKX1 Krtcap3-201ENSMUST00000054829 904 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Ptchd4B9EKX1 Olfr317-201ENSMUST00000075607 1128 ntAPPRIS P1 BASIC18.78■□□□□ 0.6
Ptchd4B9EKX1 Eme2-202ENSMUST00000121542 1521 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Ptchd4B9EKX1 Prss54-205ENSMUST00000213096 1501 ntAPPRIS P3 TSL 5 BASIC18.78■□□□□ 0.6
Ptchd4B9EKX1 Tia1-203ENSMUST00000095754 1789 ntAPPRIS ALT1 TSL 5 BASIC18.78■□□□□ 0.6
Ptchd4B9EKX1 Sptbn4-207ENSMUST00000172269 8737 ntAPPRIS ALT2 TSL 2 BASIC18.78■□□□□ 0.6
Ptchd4B9EKX1 Ache-202ENSMUST00000085934 2176 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Ptchd4B9EKX1 Rbms1-209ENSMUST00000164147 2543 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Ptchd4B9EKX1 Lrch2-201ENSMUST00000112819 4892 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.6
Ptchd4B9EKX1 Gm43272-201ENSMUST00000200599 1584 ntBASIC18.77■□□□□ 0.6
Ptchd4B9EKX1 Dnajb2-208ENSMUST00000188346 1823 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Ptchd4B9EKX1 Chpt1-203ENSMUST00000117440 4863 ntAPPRIS ALT2 TSL 5 BASIC18.77■□□□□ 0.6
Ptchd4B9EKX1 Pdzd3-201ENSMUST00000034618 2193 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Ptchd4B9EKX1 Cltb-201ENSMUST00000049575 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
Ptchd4B9EKX1 Olfr315-201ENSMUST00000081533 998 ntAPPRIS P1 BASIC18.77■□□□□ 0.6
Ptchd4B9EKX1 Dscam-201ENSMUST00000056102 7498 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Ptchd4B9EKX1 Dbnl-203ENSMUST00000109845 2001 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
Ptchd4B9EKX1 Lrrc43-201ENSMUST00000094327 2046 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.6
Ptchd4B9EKX1 Spire1-203ENSMUST00000115050 5405 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
Ptchd4B9EKX1 Gm8258-201ENSMUST00000055593 1449 ntBASIC18.76■□□□□ 0.59
Ptchd4B9EKX1 Ogg1-201ENSMUST00000032406 1549 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Ptchd4B9EKX1 Cacul1-203ENSMUST00000166712 5700 ntAPPRIS ALT2 TSL 5 BASIC18.76■□□□□ 0.59
Ptchd4B9EKX1 Sh3yl1-202ENSMUST00000110880 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
Ptchd4B9EKX1 Gm26827-201ENSMUST00000181911 148 ntTSL 5 BASIC18.76■□□□□ 0.59
Ptchd4B9EKX1 Pcyox1-206ENSMUST00000204116 546 ntTSL 5 BASIC18.76■□□□□ 0.59
Ptchd4B9EKX1 Laptm4b-201ENSMUST00000022867 1902 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Ptchd4B9EKX1 9330154J02Rik-202ENSMUST00000185960 2557 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Ptchd4B9EKX1 Krt13-201ENSMUST00000007275 1654 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Ptchd4B9EKX1 Fzd2-201ENSMUST00000057893 3663 ntAPPRIS P1 BASIC18.76■□□□□ 0.59
Ptchd4B9EKX1 Tal1-204ENSMUST00000162489 2894 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Ptchd4B9EKX1 Tubb4b-ps1-201ENSMUST00000179460 1336 ntBASIC18.75■□□□□ 0.59
Ptchd4B9EKX1 1300014J16Rik-201ENSMUST00000219015 1337 ntBASIC18.75■□□□□ 0.59
Ptchd4B9EKX1 Trim25-202ENSMUST00000100627 1433 ntTSL 5 BASIC18.75■□□□□ 0.59
Ptchd4B9EKX1 Agbl5-209ENSMUST00000201225 2646 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
Ptchd4B9EKX1 Kcnt1-203ENSMUST00000114172 5219 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
Ptchd4B9EKX1 Itsn2-201ENSMUST00000062580 5987 ntAPPRIS P2 TSL 5 BASIC18.75■□□□□ 0.59
Ptchd4B9EKX1 Dennd3-201ENSMUST00000043414 5299 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Ptchd4B9EKX1 Ndufb11-201ENSMUST00000116621 908 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Ptchd4B9EKX1 Gm44924-201ENSMUST00000138087 421 ntTSL 3 BASIC18.75■□□□□ 0.59
Ptchd4B9EKX1 Gm4316-202ENSMUST00000212490 1115 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Ptchd4B9EKX1 Ly6h-202ENSMUST00000065417 985 ntAPPRIS ALT1 TSL 2 BASIC18.75■□□□□ 0.59
Ptchd4B9EKX1 Sema6d-203ENSMUST00000077847 6444 ntTSL 5 BASIC18.75■□□□□ 0.59
Ptchd4B9EKX1 Gm15582-201ENSMUST00000132849 1581 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Ptchd4B9EKX1 Meg3-201ENSMUST00000124106 1988 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Ptchd4B9EKX1 Orai3-201ENSMUST00000061587 1996 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Ptchd4B9EKX1 Akt2-205ENSMUST00000108344 4544 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Ptchd4B9EKX1 Ltbp4-205ENSMUST00000121175 5118 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
Ptchd4B9EKX1 Gpn3-201ENSMUST00000031420 1592 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Retrieved 100 of 76,532 protein–RNA pairs in 38.8 ms