Protein–RNA interactions for Protein: A6H584

Col6a5, Collagen alpha-5(VI) chain, mousemouse

Predictions only

Length 2,640 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a5A6H584 Igfbpl1-201ENSMUST00000044297 2864 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Col6a5A6H584 Gm14221-202ENSMUST00000209603 1437 ntTSL 5 BASIC13.22□□□□□ -0.29
Col6a5A6H584 Kcnk3-201ENSMUST00000066295 3811 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Col6a5A6H584 Swsap1-201ENSMUST00000053583 1838 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Col6a5A6H584 Kat14-208ENSMUST00000147747 3299 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Col6a5A6H584 Frat1-201ENSMUST00000087155 2614 ntAPPRIS P1 BASIC13.22□□□□□ -0.29
Col6a5A6H584 1810062O18Rik-203ENSMUST00000129237 647 ntTSL 5 BASIC13.22□□□□□ -0.29
Col6a5A6H584 Gm13849-201ENSMUST00000153328 835 ntTSL 5 BASIC13.22□□□□□ -0.29
Col6a5A6H584 Gm25911-201ENSMUST00000157621 56 ntBASIC13.22□□□□□ -0.29
Col6a5A6H584 Pou3f1-201ENSMUST00000053491 3849 ntAPPRIS P1 BASIC13.22□□□□□ -0.29
Col6a5A6H584 Fam26f-201ENSMUST00000062784 1094 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Col6a5A6H584 Isg15-201ENSMUST00000085425 756 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Col6a5A6H584 Eif6-202ENSMUST00000109638 1382 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Col6a5A6H584 Iqck-201ENSMUST00000098087 1503 ntAPPRIS ALT2 TSL 5 BASIC13.22□□□□□ -0.29
Col6a5A6H584 Abat-202ENSMUST00000115838 1348 ntTSL 2 BASIC13.22□□□□□ -0.29
Col6a5A6H584 Slc29a1-201ENSMUST00000051574 1996 ntAPPRIS ALT2 TSL 5 BASIC13.22□□□□□ -0.29
Col6a5A6H584 Bola3-202ENSMUST00000120040 583 ntTSL 3 BASIC13.22□□□□□ -0.29
Col6a5A6H584 Gm16272-201ENSMUST00000128218 388 ntTSL 2 BASIC13.22□□□□□ -0.29
Col6a5A6H584 Lamtor5-201ENSMUST00000145735 881 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Col6a5A6H584 AC125350.1-201ENSMUST00000225115 903 ntBASIC13.22□□□□□ -0.29
Col6a5A6H584 Wdyhv1-204ENSMUST00000226955 1094 ntBASIC13.22□□□□□ -0.29
Col6a5A6H584 Smurf1-201ENSMUST00000085684 5343 ntAPPRIS P4 TSL 1 (best) BASIC13.22□□□□□ -0.29
Col6a5A6H584 Chrm4-201ENSMUST00000045537 1440 ntAPPRIS P1 BASIC13.22□□□□□ -0.29
Col6a5A6H584 Rxra-201ENSMUST00000077257 4905 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Col6a5A6H584 Haus4-201ENSMUST00000022784 1587 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Col6a5A6H584 Zdhhc6-209ENSMUST00000225495 1711 ntBASIC13.22□□□□□ -0.29
Col6a5A6H584 Fcmr-201ENSMUST00000038829 1600 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Col6a5A6H584 Zfp777-202ENSMUST00000114583 3111 ntAPPRIS P3 TSL 5 BASIC13.21□□□□□ -0.29
Col6a5A6H584 H2af-ps-201ENSMUST00000119066 295 ntBASIC13.21□□□□□ -0.29
Col6a5A6H584 4930593A02Rik-202ENSMUST00000203879 938 ntTSL 5 BASIC13.21□□□□□ -0.29
Col6a5A6H584 Plekha4-206ENSMUST00000211155 2044 ntAPPRIS ALT2 TSL 5 BASIC13.21□□□□□ -0.29
Col6a5A6H584 Rpl28-201ENSMUST00000032597 1106 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Col6a5A6H584 Ndufb6-201ENSMUST00000095128 659 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Col6a5A6H584 Prdm8-201ENSMUST00000112959 4553 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Col6a5A6H584 Pdp1-206ENSMUST00000108302 2525 ntTSL 3 BASIC13.21□□□□□ -0.29
Col6a5A6H584 Slc25a3-201ENSMUST00000076694 1612 ntAPPRIS P2 TSL 1 (best) BASIC13.21□□□□□ -0.29
Col6a5A6H584 Sae1-201ENSMUST00000094815 1875 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Col6a5A6H584 Rncr4-201ENSMUST00000194541 2234 ntBASIC13.21□□□□□ -0.3
Col6a5A6H584 Arhgap27os1-201ENSMUST00000130556 923 ntTSL 1 (best) BASIC13.21□□□□□ -0.3
Col6a5A6H584 Gm16838-201ENSMUST00000144594 816 ntTSL 1 (best) BASIC13.21□□□□□ -0.3
Col6a5A6H584 Gm26308-201ENSMUST00000157768 69 ntBASIC13.21□□□□□ -0.3
Col6a5A6H584 Gm45144-201ENSMUST00000207473 354 ntTSL 5 BASIC13.21□□□□□ -0.3
Col6a5A6H584 Ydjc-201ENSMUST00000069064 1297 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Col6a5A6H584 Mcmbp-202ENSMUST00000119081 2347 ntTSL 1 (best) BASIC13.21□□□□□ -0.3
Col6a5A6H584 Pisd-201ENSMUST00000061895 2183 ntAPPRIS P3 TSL 1 (best) BASIC13.21□□□□□ -0.3
Col6a5A6H584 Rnpep-201ENSMUST00000074357 2171 ntTSL 1 (best) BASIC13.21□□□□□ -0.3
Col6a5A6H584 Vps72-201ENSMUST00000009102 1456 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Col6a5A6H584 Sec22b-202ENSMUST00000122288 1177 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Col6a5A6H584 Gm16845-202ENSMUST00000216270 567 ntTSL 2 BASIC13.2□□□□□ -0.3
Col6a5A6H584 A830031A19Rik-201ENSMUST00000068360 757 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Col6a5A6H584 Cav2-201ENSMUST00000000058 2733 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Col6a5A6H584 Gm15751-201ENSMUST00000134552 1862 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Col6a5A6H584 Acvr1b-201ENSMUST00000000544 4413 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Col6a5A6H584 Fnbp1-205ENSMUST00000113552 1910 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Col6a5A6H584 4430402I18Rik-205ENSMUST00000162110 1559 ntAPPRIS P1 TSL 5 BASIC13.2□□□□□ -0.3
Col6a5A6H584 Mmp11-201ENSMUST00000000924 2288 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Col6a5A6H584 2200002J24Rik-201ENSMUST00000013227 333 ntAPPRIS P1 TSL 3 BASIC13.2□□□□□ -0.3
Col6a5A6H584 Mymx-202ENSMUST00000169137 616 ntAPPRIS P4 TSL 2 BASIC13.2□□□□□ -0.3
Col6a5A6H584 Gm37805-201ENSMUST00000192612 1094 ntBASIC13.2□□□□□ -0.3
Col6a5A6H584 Ptprcap-201ENSMUST00000061086 927 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Col6a5A6H584 B3gat2-203ENSMUST00000144602 1488 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Col6a5A6H584 Gm5414-201ENSMUST00000062879 1659 ntAPPRIS P1 TSL 2 BASIC13.2□□□□□ -0.3
Col6a5A6H584 Ptpmt1-203ENSMUST00000125001 3183 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Col6a5A6H584 Efcab11-201ENSMUST00000046485 2068 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Col6a5A6H584 B3galnt2-204ENSMUST00000221300 2397 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Col6a5A6H584 Nagk-201ENSMUST00000037376 1405 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Col6a5A6H584 Selenoo-201ENSMUST00000082439 2383 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Col6a5A6H584 Ncmap-205ENSMUST00000105860 2000 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Col6a5A6H584 Zbtb7c-202ENSMUST00000167921 2147 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Col6a5A6H584 Crlf3-203ENSMUST00000103233 2230 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Col6a5A6H584 Cers1-203ENSMUST00000165819 2728 ntAPPRIS P4 TSL 1 (best) BASIC13.19□□□□□ -0.3
Col6a5A6H584 Ubtf-201ENSMUST00000006754 3213 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Col6a5A6H584 Gm14140-201ENSMUST00000119999 995 ntBASIC13.19□□□□□ -0.3
Col6a5A6H584 Gm2431-201ENSMUST00000171531 519 ntAPPRIS P1 TSL 5 BASIC13.19□□□□□ -0.3
Col6a5A6H584 Snupn-201ENSMUST00000068856 1391 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Col6a5A6H584 Gja4-201ENSMUST00000053753 1685 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Col6a5A6H584 Tpm1-215ENSMUST00000113705 1759 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Col6a5A6H584 Eif1a-202ENSMUST00000168382 1750 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Col6a5A6H584 Mpig6b-201ENSMUST00000097337 2252 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Col6a5A6H584 Dcbld1-201ENSMUST00000069004 3024 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Col6a5A6H584 Taz-202ENSMUST00000114180 1786 ntAPPRIS ALT1 TSL 5 BASIC13.19□□□□□ -0.3
Col6a5A6H584 Ankrd13d-204ENSMUST00000167215 639 ntTSL 3 BASIC13.19□□□□□ -0.3
Col6a5A6H584 AC084391.1-201ENSMUST00000200651 141 ntBASIC13.19□□□□□ -0.3
Col6a5A6H584 Cyp4f15-204ENSMUST00000168171 2168 ntAPPRIS P3 TSL 1 (best) BASIC13.19□□□□□ -0.3
Col6a5A6H584 Atxn7l2-202ENSMUST00000117409 2321 ntAPPRIS ALT2 TSL 5 BASIC13.18□□□□□ -0.3
Col6a5A6H584 Ppcs-202ENSMUST00000106316 954 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Col6a5A6H584 Psmc4-206ENSMUST00000140053 1244 ntTSL 5 BASIC13.18□□□□□ -0.3
Col6a5A6H584 Rprl3-201ENSMUST00000157400 290 ntBASIC13.18□□□□□ -0.3
Col6a5A6H584 Gm23547-201ENSMUST00000158210 271 ntBASIC13.18□□□□□ -0.3
Col6a5A6H584 Fbxo17-205ENSMUST00000167118 861 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
Col6a5A6H584 Tm4sf5-201ENSMUST00000019063 1000 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Col6a5A6H584 Gm44662-201ENSMUST00000206970 412 ntTSL 5 BASIC13.18□□□□□ -0.3
Col6a5A6H584 AC122351.1-201ENSMUST00000220467 126 ntBASIC13.18□□□□□ -0.3
Col6a5A6H584 Prdx4-201ENSMUST00000026328 990 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Col6a5A6H584 Mdk-202ENSMUST00000069423 773 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Col6a5A6H584 Riox1-201ENSMUST00000053744 2344 ntAPPRIS P1 BASIC13.18□□□□□ -0.3
Col6a5A6H584 Ovol2-202ENSMUST00000103171 1547 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Col6a5A6H584 Golga7b-202ENSMUST00000122375 2836 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Col6a5A6H584 Sstr1-201ENSMUST00000044299 2014 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Col6a5A6H584 Zfp579-206ENSMUST00000162731 2489 ntAPPRIS P1 BASIC13.18□□□□□ -0.3
Retrieved 100 of 76,532 protein–RNA pairs in 54.9 ms