Protein–RNA interactions for Protein: A0N8R1

Trav12-1, T cell receptor alpha variable 12-1 (Fragment), mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav12-1A0N8R1 Rhod-202ENSMUST00000117462 1495 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
Trav12-1A0N8R1 Klk9-201ENSMUST00000005891 1476 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Trav12-1A0N8R1 Lrp3-201ENSMUST00000118444 3877 ntAPPRIS P1 TSL 5 BASIC14.63□□□□□ -0.07
Trav12-1A0N8R1 Aspscr1-204ENSMUST00000106159 1615 ntTSL 5 BASIC14.63□□□□□ -0.07
Trav12-1A0N8R1 Lhx6-203ENSMUST00000112963 3481 ntTSL 2 BASIC14.62□□□□□ -0.07
Trav12-1A0N8R1 Clk4-201ENSMUST00000093132 1949 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Trav12-1A0N8R1 Dbn1-202ENSMUST00000109921 2378 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
Trav12-1A0N8R1 Fam131b-203ENSMUST00000143278 4104 ntAPPRIS P3 TSL 1 (best) BASIC14.62□□□□□ -0.07
Trav12-1A0N8R1 Sbf1-205ENSMUST00000144585 6165 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
Trav12-1A0N8R1 Gapvd1-203ENSMUST00000113099 5758 ntAPPRIS ALT2 TSL 5 BASIC14.62□□□□□ -0.07
Trav12-1A0N8R1 Evx2-201ENSMUST00000001867 4191 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
Trav12-1A0N8R1 Arl2bp-202ENSMUST00000109527 1133 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Trav12-1A0N8R1 Pi16-201ENSMUST00000114699 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
Trav12-1A0N8R1 Hmga1-204ENSMUST00000118570 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Trav12-1A0N8R1 Gm26548-201ENSMUST00000181165 2029 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Trav12-1A0N8R1 Arl6ip4-201ENSMUST00000031351 1192 ntAPPRIS P2 TSL 1 (best) BASIC14.62□□□□□ -0.07
Trav12-1A0N8R1 B230217C12Rik-201ENSMUST00000054783 1189 ntAPPRIS P1 TSL 5 BASIC14.62□□□□□ -0.07
Trav12-1A0N8R1 Ipo9-201ENSMUST00000041023 6247 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Trav12-1A0N8R1 Ptp4a2-201ENSMUST00000030578 3646 ntAPPRIS P1 TSL 5 BASIC14.62□□□□□ -0.07
Trav12-1A0N8R1 Bcor-206ENSMUST00000124033 6785 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
Trav12-1A0N8R1 Fiz1-203ENSMUST00000167804 2637 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Trav12-1A0N8R1 Fam109a-203ENSMUST00000198271 2335 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Trav12-1A0N8R1 Txnl4b-201ENSMUST00000034159 1890 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Trav12-1A0N8R1 Slk-201ENSMUST00000026043 7278 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
Trav12-1A0N8R1 Guca1b-202ENSMUST00000145462 1556 ntTSL 2 BASIC14.61□□□□□ -0.07
Trav12-1A0N8R1 Cmtm4-201ENSMUST00000179802 7734 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Trav12-1A0N8R1 Lonrf1-201ENSMUST00000065297 3930 ntAPPRIS P1 TSL 5 BASIC14.61□□□□□ -0.07
Trav12-1A0N8R1 Gm20390-201ENSMUST00000170303 991 ntAPPRIS P1 TSL 5 BASIC14.61□□□□□ -0.07
Trav12-1A0N8R1 Slc7a6os-201ENSMUST00000035925 1246 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Trav12-1A0N8R1 Csnk2a2-203ENSMUST00000212214 6779 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Trav12-1A0N8R1 F12-201ENSMUST00000021948 1960 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Trav12-1A0N8R1 Cds2-202ENSMUST00000103181 8396 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Trav12-1A0N8R1 Flg-201ENSMUST00000050758 1488 ntBASIC14.61□□□□□ -0.07
Trav12-1A0N8R1 Gm10649-203ENSMUST00000148066 1812 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Trav12-1A0N8R1 C430049E01Rik-201ENSMUST00000207913 1820 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Trav12-1A0N8R1 Kcnab3-201ENSMUST00000018614 2538 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Trav12-1A0N8R1 Parg-208ENSMUST00000170840 2894 ntAPPRIS ALT2 TSL 5 BASIC14.61□□□□□ -0.07
Trav12-1A0N8R1 Tbc1d13-201ENSMUST00000044556 3595 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Trav12-1A0N8R1 Fam126a-202ENSMUST00000101513 1679 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Trav12-1A0N8R1 Cacna1a-202ENSMUST00000122053 7589 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
Trav12-1A0N8R1 Tmem94-202ENSMUST00000103033 5238 ntAPPRIS P2 TSL 2 BASIC14.6□□□□□ -0.07
Trav12-1A0N8R1 Gm37820-201ENSMUST00000194021 2147 ntBASIC14.6□□□□□ -0.07
Trav12-1A0N8R1 Dscr3-201ENSMUST00000023615 2547 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Trav12-1A0N8R1 Zrsr2-202ENSMUST00000112289 2735 ntAPPRIS P1 TSL 2 BASIC14.6□□□□□ -0.07
Trav12-1A0N8R1 Rab6b-201ENSMUST00000035155 5007 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Trav12-1A0N8R1 Btbd10-203ENSMUST00000119278 2394 ntTSL 5 BASIC14.6□□□□□ -0.07
Trav12-1A0N8R1 Ociad2-202ENSMUST00000200776 2359 ntTSL 3 BASIC14.6□□□□□ -0.07
Trav12-1A0N8R1 Olfr94-203ENSMUST00000222190 1611 ntAPPRIS ALT2 TSL 5 BASIC14.6□□□□□ -0.07
Trav12-1A0N8R1 Ppp1r3f-205ENSMUST00000150787 4760 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
Trav12-1A0N8R1 Map3k10-202ENSMUST00000108341 3403 ntAPPRIS ALT2 TSL 5 BASIC14.6□□□□□ -0.07
Trav12-1A0N8R1 Gm11627-201ENSMUST00000107080 585 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Trav12-1A0N8R1 Hmga1-205ENSMUST00000118599 529 ntAPPRIS P3 TSL 3 BASIC14.6□□□□□ -0.07
Trav12-1A0N8R1 Gm42555-201ENSMUST00000199304 1039 ntBASIC14.6□□□□□ -0.07
Trav12-1A0N8R1 Prmt1-205ENSMUST00000207659 945 ntTSL 5 BASIC14.6□□□□□ -0.07
Trav12-1A0N8R1 Tmem53-201ENSMUST00000062824 991 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Trav12-1A0N8R1 Gnb5-201ENSMUST00000076889 1188 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Trav12-1A0N8R1 Jmy-201ENSMUST00000065537 8776 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Trav12-1A0N8R1 Rara-204ENSMUST00000107475 2469 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Trav12-1A0N8R1 Fbxo22-201ENSMUST00000034859 2112 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Trav12-1A0N8R1 Arrb2-202ENSMUST00000084954 1732 ntTSL 5 BASIC14.6□□□□□ -0.07
Trav12-1A0N8R1 1810010K12Rik-201ENSMUST00000070378 1324 ntBASIC14.6□□□□□ -0.07
Trav12-1A0N8R1 Aurkb-201ENSMUST00000021277 1950 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Trav12-1A0N8R1 Gpat3-203ENSMUST00000112887 3059 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Trav12-1A0N8R1 Map3k5-201ENSMUST00000095806 5450 ntAPPRIS P2 TSL 1 (best) BASIC14.59□□□□□ -0.07
Trav12-1A0N8R1 Ptprf-201ENSMUST00000049074 7656 ntAPPRIS P1 TSL 5 BASIC14.59□□□□□ -0.07
Trav12-1A0N8R1 Clcn2-202ENSMUST00000120099 2812 ntAPPRIS ALT2 TSL 5 BASIC14.59□□□□□ -0.07
Trav12-1A0N8R1 Cacna1b-202ENSMUST00000070864 9655 ntAPPRIS P3 TSL 5 BASIC14.59□□□□□ -0.07
Trav12-1A0N8R1 Tfdp2-206ENSMUST00000185644 2646 ntAPPRIS P3 TSL 1 (best) BASIC14.59□□□□□ -0.07
Trav12-1A0N8R1 Gprin1-202ENSMUST00000135343 4248 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Trav12-1A0N8R1 Ddx41-204ENSMUST00000224765 2199 ntBASIC14.59□□□□□ -0.07
Trav12-1A0N8R1 Rtkn-201ENSMUST00000065512 2191 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
Trav12-1A0N8R1 Ccdc105-201ENSMUST00000105383 1714 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Trav12-1A0N8R1 4930444P10Rik-203ENSMUST00000151004 1001 ntAPPRIS P2 TSL 3 BASIC14.59□□□□□ -0.07
Trav12-1A0N8R1 Tecr-203ENSMUST00000165740 1120 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Trav12-1A0N8R1 Mir2861-201ENSMUST00000175539 82 ntBASIC14.59□□□□□ -0.07
Trav12-1A0N8R1 Smn1-201ENSMUST00000022147 1222 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Trav12-1A0N8R1 Naxe-201ENSMUST00000029708 908 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Trav12-1A0N8R1 Kif7-202ENSMUST00000178048 4524 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
Trav12-1A0N8R1 Gm26795-201ENSMUST00000180993 1952 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Trav12-1A0N8R1 Dnlz-201ENSMUST00000028295 2916 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Trav12-1A0N8R1 A430078I02Rik-202ENSMUST00000154066 2233 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Trav12-1A0N8R1 Kcnd3-202ENSMUST00000098761 7169 ntAPPRIS ALT1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Trav12-1A0N8R1 Eral1-201ENSMUST00000021183 2014 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Trav12-1A0N8R1 Mmp11-201ENSMUST00000000924 2288 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Trav12-1A0N8R1 Yipf2-204ENSMUST00000213809 1883 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Trav12-1A0N8R1 Vopp1-201ENSMUST00000114297 2919 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Trav12-1A0N8R1 Gm15743-202ENSMUST00000182690 1901 ntBASIC14.58□□□□□ -0.07
Trav12-1A0N8R1 Henmt1-202ENSMUST00000098680 1466 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.08
Trav12-1A0N8R1 Zfyve19-201ENSMUST00000090174 2008 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Trav12-1A0N8R1 Bean1-201ENSMUST00000093245 3199 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.08
Trav12-1A0N8R1 Pex6-201ENSMUST00000002840 3200 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Trav12-1A0N8R1 Gm10849-201ENSMUST00000100397 618 ntBASIC14.58□□□□□ -0.08
Trav12-1A0N8R1 Pigp-202ENSMUST00000113906 745 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Trav12-1A0N8R1 Gm20532-201ENSMUST00000174066 780 ntAPPRIS P1 TSL 5 BASIC14.58□□□□□ -0.08
Trav12-1A0N8R1 Zfp428-203ENSMUST00000177205 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.08
Trav12-1A0N8R1 Gm26657-201ENSMUST00000181745 1308 ntAPPRIS P1 BASIC14.58□□□□□ -0.08
Trav12-1A0N8R1 Pitpnm2-210ENSMUST00000162812 6952 ntAPPRIS P3 TSL 1 (best) BASIC14.58□□□□□ -0.08
Trav12-1A0N8R1 Piezo2-201ENSMUST00000046860 2849 ntTSL 5 BASIC14.58□□□□□ -0.08
Trav12-1A0N8R1 Tmem132e-201ENSMUST00000054245 4386 ntAPPRIS P2 TSL 1 (best) BASIC14.58□□□□□ -0.08
Trav12-1A0N8R1 Ern1-204ENSMUST00000106801 1957 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Retrieved 100 of 76,532 protein–RNA pairs in 35.1 ms