Protein–RNA interactions for Protein: A0A1W2P7H6

Mindy4b-ps, MINDY lysine 48 deubiquitinase 4B, pseudogene, mousemouse

Predictions only

Length 457 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mindy4b-psA0A1W2P7H6 Ctnnal1-202ENSMUST00000107612 850 ntTSL 3 BASIC18.49■□□□□ 0.55
Mindy4b-psA0A1W2P7H6 2210408F21Rik-204ENSMUST00000136571 478 ntTSL 3 BASIC18.49■□□□□ 0.55
Mindy4b-psA0A1W2P7H6 Nsl1-203ENSMUST00000139340 837 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Mindy4b-psA0A1W2P7H6 Gm24841-201ENSMUST00000158676 357 ntBASIC18.49■□□□□ 0.55
Mindy4b-psA0A1W2P7H6 Prlh-201ENSMUST00000166281 276 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Mindy4b-psA0A1W2P7H6 Calu-208ENSMUST00000173694 611 ntTSL 5 BASIC18.49■□□□□ 0.55
Mindy4b-psA0A1W2P7H6 Cpne1-217ENSMUST00000184265 871 ntTSL 5 BASIC18.49■□□□□ 0.55
Mindy4b-psA0A1W2P7H6 Rwdd1-201ENSMUST00000019917 1090 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Mindy4b-psA0A1W2P7H6 Lce1m-201ENSMUST00000029520 874 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Mindy4b-psA0A1W2P7H6 Slit3-201ENSMUST00000069837 5228 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Mindy4b-psA0A1W2P7H6 Nfs1-201ENSMUST00000029147 2051 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Mindy4b-psA0A1W2P7H6 Camsap3-212ENSMUST00000208240 2572 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Mindy4b-psA0A1W2P7H6 Man1c1-201ENSMUST00000038628 4285 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Mindy4b-psA0A1W2P7H6 Schip1-201ENSMUST00000029346 2201 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Mindy4b-psA0A1W2P7H6 Necab3-202ENSMUST00000109716 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
Mindy4b-psA0A1W2P7H6 Nrxn2-203ENSMUST00000113459 3285 ntTSL 2 BASIC18.48■□□□□ 0.55
Mindy4b-psA0A1W2P7H6 Surf4-201ENSMUST00000015011 3281 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Mindy4b-psA0A1W2P7H6 Larp1b-202ENSMUST00000048490 2354 ntAPPRIS P2 TSL 1 (best) BASIC18.48■□□□□ 0.55
Mindy4b-psA0A1W2P7H6 Tmem127-201ENSMUST00000035871 4811 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Mindy4b-psA0A1W2P7H6 Gm43272-201ENSMUST00000200599 1584 ntBASIC18.48■□□□□ 0.55
Mindy4b-psA0A1W2P7H6 Meox1-201ENSMUST00000057054 2228 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Mindy4b-psA0A1W2P7H6 Ubtf-207ENSMUST00000128016 1062 ntTSL 2 BASIC18.48■□□□□ 0.55
Mindy4b-psA0A1W2P7H6 Utf1-201ENSMUST00000168457 1227 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Mindy4b-psA0A1W2P7H6 Gm38027-201ENSMUST00000192315 235 ntBASIC18.48■□□□□ 0.55
Mindy4b-psA0A1W2P7H6 Gm19610-201ENSMUST00000202894 408 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
Mindy4b-psA0A1W2P7H6 Btg1-202ENSMUST00000218953 668 ntTSL 2 BASIC18.48■□□□□ 0.55
Mindy4b-psA0A1W2P7H6 Grhpr-201ENSMUST00000045078 1280 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Mindy4b-psA0A1W2P7H6 Ttc19-201ENSMUST00000050646 3410 ntAPPRIS P3 TSL 1 (best) BASIC18.48■□□□□ 0.55
Mindy4b-psA0A1W2P7H6 Prpsap1-201ENSMUST00000106391 1841 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Mindy4b-psA0A1W2P7H6 Sulf2-201ENSMUST00000088086 3927 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Mindy4b-psA0A1W2P7H6 Wtap-205ENSMUST00000160781 2442 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
Mindy4b-psA0A1W2P7H6 Serinc2-201ENSMUST00000105996 1878 ntAPPRIS P3 TSL 1 (best) BASIC18.48■□□□□ 0.55
Mindy4b-psA0A1W2P7H6 Tbc1d9-202ENSMUST00000093393 5334 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Mindy4b-psA0A1W2P7H6 Adam15-203ENSMUST00000107446 1686 ntTSL 5 BASIC18.47■□□□□ 0.55
Mindy4b-psA0A1W2P7H6 Proc-201ENSMUST00000171765 1566 ntAPPRIS P1 TSL 5 BASIC18.47■□□□□ 0.55
Mindy4b-psA0A1W2P7H6 Syncrip-205ENSMUST00000173801 2944 ntAPPRIS ALT1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Mindy4b-psA0A1W2P7H6 Map6-206ENSMUST00000208605 2275 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
Mindy4b-psA0A1W2P7H6 Opa3-202ENSMUST00000161711 1390 ntAPPRIS ALT2 TSL 2 BASIC18.47■□□□□ 0.55
Mindy4b-psA0A1W2P7H6 Mcu-202ENSMUST00000020312 2872 ntAPPRIS P1 TSL 5 BASIC18.47■□□□□ 0.55
Mindy4b-psA0A1W2P7H6 Smim15-205ENSMUST00000225972 2097 ntAPPRIS P1 BASIC18.47■□□□□ 0.55
Mindy4b-psA0A1W2P7H6 Gm20472-201ENSMUST00000174403 1240 ntBASIC18.47■□□□□ 0.55
Mindy4b-psA0A1W2P7H6 Gm10830-201ENSMUST00000186379 636 ntTSL 5 BASIC18.47■□□□□ 0.55
Mindy4b-psA0A1W2P7H6 Ccnd2-204ENSMUST00000201637 1006 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Mindy4b-psA0A1W2P7H6 Fxyd1-208ENSMUST00000205807 539 ntTSL 3 BASIC18.47■□□□□ 0.55
Mindy4b-psA0A1W2P7H6 AC135963.1-201ENSMUST00000211640 717 ntBASIC18.47■□□□□ 0.55
Mindy4b-psA0A1W2P7H6 Rps12-206ENSMUST00000218221 460 ntTSL 5 BASIC18.47■□□□□ 0.55
Mindy4b-psA0A1W2P7H6 Kcnd3-202ENSMUST00000098761 7169 ntAPPRIS ALT1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Mindy4b-psA0A1W2P7H6 Lysmd4-209ENSMUST00000208998 2110 ntAPPRIS P2 TSL 1 (best) BASIC18.47■□□□□ 0.55
Mindy4b-psA0A1W2P7H6 Dlk2-202ENSMUST00000166280 1341 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Mindy4b-psA0A1W2P7H6 Spock1-201ENSMUST00000172326 1320 ntAPPRIS P3 TSL 5 BASIC18.47■□□□□ 0.55
Mindy4b-psA0A1W2P7H6 Polr1c-201ENSMUST00000087026 1314 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Mindy4b-psA0A1W2P7H6 Rbm11-202ENSMUST00000114249 2750 ntAPPRIS ALT2 TSL 5 BASIC18.47■□□□□ 0.55
Mindy4b-psA0A1W2P7H6 Zfp219-204ENSMUST00000226522 2804 ntAPPRIS P2 BASIC18.46■□□□□ 0.55
Mindy4b-psA0A1W2P7H6 Gm16712-201ENSMUST00000181962 1960 ntTSL 2 BASIC18.46■□□□□ 0.55
Mindy4b-psA0A1W2P7H6 Cers1-202ENSMUST00000140239 2711 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
Mindy4b-psA0A1W2P7H6 Mpz-202ENSMUST00000111334 1278 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Mindy4b-psA0A1W2P7H6 Gm12979-201ENSMUST00000145488 405 ntTSL 2 BASIC18.46■□□□□ 0.55
Mindy4b-psA0A1W2P7H6 Gm42884-202ENSMUST00000202523 423 ntTSL 3 BASIC18.46■□□□□ 0.55
Mindy4b-psA0A1W2P7H6 Cib1-207ENSMUST00000206084 772 ntTSL 3 BASIC18.46■□□□□ 0.55
Mindy4b-psA0A1W2P7H6 4933406B15Rik-201ENSMUST00000220065 1182 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
Mindy4b-psA0A1W2P7H6 Cib1-202ENSMUST00000071457 702 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
Mindy4b-psA0A1W2P7H6 Odf1-201ENSMUST00000081966 1105 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Mindy4b-psA0A1W2P7H6 Ola1-201ENSMUST00000028517 2175 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Mindy4b-psA0A1W2P7H6 Pdx1-201ENSMUST00000085591 2158 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Mindy4b-psA0A1W2P7H6 Racgap1-213ENSMUST00000171702 3052 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Mindy4b-psA0A1W2P7H6 Gas1-201ENSMUST00000065086 2961 ntAPPRIS ALT2 BASIC18.46■□□□□ 0.55
Mindy4b-psA0A1W2P7H6 Zdhhc16-201ENSMUST00000026154 1821 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Mindy4b-psA0A1W2P7H6 Itsn1-205ENSMUST00000113996 5147 ntTSL 5 BASIC18.46■□□□□ 0.55
Mindy4b-psA0A1W2P7H6 Tfeb-203ENSMUST00000113284 1974 ntTSL 5 BASIC18.46■□□□□ 0.55
Mindy4b-psA0A1W2P7H6 Sbf1-201ENSMUST00000123791 6190 ntAPPRIS P3 TSL 1 (best) BASIC18.46■□□□□ 0.54
Mindy4b-psA0A1W2P7H6 Fgf22-202ENSMUST00000219228 2167 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Mindy4b-psA0A1W2P7H6 Osbpl1a-207ENSMUST00000121808 3030 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
Mindy4b-psA0A1W2P7H6 Sprtn-201ENSMUST00000034467 4464 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Mindy4b-psA0A1W2P7H6 Runx1t1-201ENSMUST00000006761 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
Mindy4b-psA0A1W2P7H6 2210408F21Rik-211ENSMUST00000151800 750 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
Mindy4b-psA0A1W2P7H6 Casp3-203ENSMUST00000210534 583 ntTSL 5 BASIC18.45■□□□□ 0.54
Mindy4b-psA0A1W2P7H6 Lysmd2-201ENSMUST00000034702 1189 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Mindy4b-psA0A1W2P7H6 Tmem185a-201ENSMUST00000101506 2429 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
Mindy4b-psA0A1W2P7H6 Nipsnap3b-201ENSMUST00000015391 1552 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Mindy4b-psA0A1W2P7H6 Gpr180-201ENSMUST00000022728 1875 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Mindy4b-psA0A1W2P7H6 Krt82-201ENSMUST00000023713 2087 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Mindy4b-psA0A1W2P7H6 Paqr7-201ENSMUST00000081525 2351 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Mindy4b-psA0A1W2P7H6 Tmem79-201ENSMUST00000001456 2406 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Mindy4b-psA0A1W2P7H6 Zscan12-201ENSMUST00000053293 2270 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Mindy4b-psA0A1W2P7H6 Polr2m-202ENSMUST00000163972 2138 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
Mindy4b-psA0A1W2P7H6 Camk2d-228ENSMUST00000200171 5396 ntTSL 5 BASIC18.44■□□□□ 0.54
Mindy4b-psA0A1W2P7H6 Kcns3-201ENSMUST00000055673 2933 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Mindy4b-psA0A1W2P7H6 Tmem125-201ENSMUST00000060214 1864 ntAPPRIS P1 TSL 2 BASIC18.44■□□□□ 0.54
Mindy4b-psA0A1W2P7H6 Btbd2-201ENSMUST00000003434 3026 ntAPPRIS P2 TSL 5 BASIC18.44■□□□□ 0.54
Mindy4b-psA0A1W2P7H6 Echdc2-204ENSMUST00000116309 1238 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Mindy4b-psA0A1W2P7H6 Vhl-201ENSMUST00000035673 2792 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Mindy4b-psA0A1W2P7H6 Insm1-201ENSMUST00000089257 3100 ntAPPRIS P1 BASIC18.44■□□□□ 0.54
Mindy4b-psA0A1W2P7H6 Vangl2-203ENSMUST00000111264 2349 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
Mindy4b-psA0A1W2P7H6 A530016L24Rik-202ENSMUST00000223266 1547 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
Mindy4b-psA0A1W2P7H6 Col15a1-202ENSMUST00000102917 5172 ntAPPRIS P2 TSL 1 (best) BASIC18.43■□□□□ 0.54
Mindy4b-psA0A1W2P7H6 Lmbr1-207ENSMUST00000200564 1598 ntTSL 5 BASIC18.43■□□□□ 0.54
Mindy4b-psA0A1W2P7H6 Scrib-202ENSMUST00000063747 5440 ntAPPRIS ALT2 TSL 1 (best) BASIC18.43■□□□□ 0.54
Mindy4b-psA0A1W2P7H6 Zfp623-201ENSMUST00000037260 2463 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Mindy4b-psA0A1W2P7H6 Gm15565-201ENSMUST00000118890 427 ntBASIC18.43■□□□□ 0.54
Mindy4b-psA0A1W2P7H6 Tsfm-202ENSMUST00000120547 1271 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
Retrieved 100 of 76,532 protein–RNA pairs in 69.3 ms