Protein–RNA interactions for Protein: A0A1B0GSS6

Gm3854, Predicted gene 3854, mousemouse

Predictions only

Length 495 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm3854A0A1B0GSS6 Pqlc1-201ENSMUST00000070135 1911 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
Gm3854A0A1B0GSS6 Nck2-201ENSMUST00000086421 2772 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Gm3854A0A1B0GSS6 Sumf1-201ENSMUST00000032191 2593 ntAPPRIS P2 TSL 1 (best) BASIC17.5■□□□□ 0.39
Gm3854A0A1B0GSS6 Mark2-206ENSMUST00000164205 3104 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
Gm3854A0A1B0GSS6 Ppp1r21-201ENSMUST00000038551 3141 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Gm3854A0A1B0GSS6 Xkr6-201ENSMUST00000119973 2963 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Gm3854A0A1B0GSS6 Hhipl1-201ENSMUST00000021685 5174 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Gm3854A0A1B0GSS6 Hspbp1-201ENSMUST00000079970 1593 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Gm3854A0A1B0GSS6 Rab3d-202ENSMUST00000119055 694 ntTSL 3 BASIC17.5■□□□□ 0.39
Gm3854A0A1B0GSS6 AC120002.2-201ENSMUST00000220205 773 ntBASIC17.5■□□□□ 0.39
Gm3854A0A1B0GSS6 Fbxl5-201ENSMUST00000047857 2858 ntAPPRIS P2 TSL 1 (best) BASIC17.5■□□□□ 0.39
Gm3854A0A1B0GSS6 Krt19-201ENSMUST00000007317 1576 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Gm3854A0A1B0GSS6 2810474O19Rik-201ENSMUST00000046689 6066 ntAPPRIS P2 TSL 1 (best) BASIC17.49■□□□□ 0.39
Gm3854A0A1B0GSS6 Htra3-202ENSMUST00000114233 1901 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Gm3854A0A1B0GSS6 Ube2d1-201ENSMUST00000020085 1431 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Gm3854A0A1B0GSS6 Sybu-208ENSMUST00000228057 3026 ntAPPRIS ALT2 BASIC17.49■□□□□ 0.39
Gm3854A0A1B0GSS6 Hpn-209ENSMUST00000168884 1762 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Gm3854A0A1B0GSS6 Pabpc1l2b-ps-201ENSMUST00000124538 690 ntBASIC17.49■□□□□ 0.39
Gm3854A0A1B0GSS6 Gm13025-201ENSMUST00000141469 1163 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Gm3854A0A1B0GSS6 Gm27704-201ENSMUST00000185094 107 ntBASIC17.49■□□□□ 0.39
Gm3854A0A1B0GSS6 Gm43791-201ENSMUST00000202914 468 ntTSL 5 BASIC17.49■□□□□ 0.39
Gm3854A0A1B0GSS6 Il3ra-202ENSMUST00000223589 738 ntBASIC17.49■□□□□ 0.39
Gm3854A0A1B0GSS6 Nudt1-201ENSMUST00000050205 954 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Gm3854A0A1B0GSS6 Lsm6-201ENSMUST00000051867 2107 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Gm3854A0A1B0GSS6 Ly6h-202ENSMUST00000065417 985 ntAPPRIS ALT1 TSL 2 BASIC17.49■□□□□ 0.39
Gm3854A0A1B0GSS6 Nudt1-202ENSMUST00000071881 952 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Gm3854A0A1B0GSS6 Mrpl37-201ENSMUST00000030365 1498 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Gm3854A0A1B0GSS6 Rnpc3-203ENSMUST00000106536 1839 ntAPPRIS P3 TSL 1 (best) BASIC17.49■□□□□ 0.39
Gm3854A0A1B0GSS6 Fst-202ENSMUST00000223640 2612 ntBASIC17.49■□□□□ 0.39
Gm3854A0A1B0GSS6 Chka-201ENSMUST00000025760 2319 ntAPPRIS ALT2 TSL 5 BASIC17.48■□□□□ 0.39
Gm3854A0A1B0GSS6 Rfx7-201ENSMUST00000093820 7988 ntAPPRIS P1 TSL 5 BASIC17.48■□□□□ 0.39
Gm3854A0A1B0GSS6 Rbm43-201ENSMUST00000102767 2057 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Gm3854A0A1B0GSS6 Pmpcb-201ENSMUST00000030882 1615 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Gm3854A0A1B0GSS6 Supv3l1-201ENSMUST00000020273 2604 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Gm3854A0A1B0GSS6 Tmem131-201ENSMUST00000027290 6546 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Gm3854A0A1B0GSS6 A930029G22Rik-201ENSMUST00000181032 1710 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Gm3854A0A1B0GSS6 Cops8-201ENSMUST00000036153 2287 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Gm3854A0A1B0GSS6 Mmp11-201ENSMUST00000000924 2288 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Gm3854A0A1B0GSS6 1700024G13Rik-201ENSMUST00000100723 850 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Gm3854A0A1B0GSS6 Gm9013-201ENSMUST00000132939 882 ntBASIC17.48■□□□□ 0.39
Gm3854A0A1B0GSS6 Mocs1-202ENSMUST00000165390 729 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Gm3854A0A1B0GSS6 Klf13-202ENSMUST00000183817 599 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Gm3854A0A1B0GSS6 Gm45631-201ENSMUST00000210318 1244 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Gm3854A0A1B0GSS6 1700022H01Rik-201ENSMUST00000219142 387 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Gm3854A0A1B0GSS6 Shc3-203ENSMUST00000223543 1241 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Gm3854A0A1B0GSS6 AC159205.3-201ENSMUST00000224614 874 ntBASIC17.48■□□□□ 0.39
Gm3854A0A1B0GSS6 Nt5c1a-201ENSMUST00000068262 1220 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Gm3854A0A1B0GSS6 Fbxl5-204ENSMUST00000119523 2801 ntTSL 5 BASIC17.48■□□□□ 0.39
Gm3854A0A1B0GSS6 Kdelr2-201ENSMUST00000110731 1829 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Gm3854A0A1B0GSS6 Coq5-201ENSMUST00000040421 2037 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Gm3854A0A1B0GSS6 Gm10489-201ENSMUST00000180511 1466 ntTSL 2 BASIC17.48■□□□□ 0.39
Gm3854A0A1B0GSS6 Cdk5r2-201ENSMUST00000160379 2799 ntAPPRIS P1 BASIC17.48■□□□□ 0.39
Gm3854A0A1B0GSS6 9030624G23Rik-201ENSMUST00000101538 2245 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Gm3854A0A1B0GSS6 Lrch4-204ENSMUST00000176667 2209 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
Gm3854A0A1B0GSS6 Camk2b-202ENSMUST00000019133 2223 ntTSL 5 BASIC17.48■□□□□ 0.39
Gm3854A0A1B0GSS6 Sept4-205ENSMUST00000107962 1678 ntAPPRIS ALT1 TSL 5 BASIC17.48■□□□□ 0.39
Gm3854A0A1B0GSS6 Gm43213-201ENSMUST00000151866 1790 ntBASIC17.48■□□□□ 0.39
Gm3854A0A1B0GSS6 Ppp2r1b-209ENSMUST00000176349 1890 ntAPPRIS ALT2 TSL 5 BASIC17.48■□□□□ 0.39
Gm3854A0A1B0GSS6 Pknox1-203ENSMUST00000175806 2272 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Gm3854A0A1B0GSS6 Cnpy1-201ENSMUST00000117098 2661 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Gm3854A0A1B0GSS6 Hnrnpl-211ENSMUST00000174548 2679 ntAPPRIS P1 TSL 5 BASIC17.47■□□□□ 0.39
Gm3854A0A1B0GSS6 Lhx8-205ENSMUST00000205251 1729 ntAPPRIS P1 TSL 5 BASIC17.47■□□□□ 0.39
Gm3854A0A1B0GSS6 Gm37374-201ENSMUST00000194954 1829 ntBASIC17.47■□□□□ 0.39
Gm3854A0A1B0GSS6 Gm3488-202ENSMUST00000181562 1945 ntAPPRIS P5 TSL 5 BASIC17.47■□□□□ 0.39
Gm3854A0A1B0GSS6 Mink1-201ENSMUST00000072237 4994 ntAPPRIS ALT2 TSL 5 BASIC17.47■□□□□ 0.39
Gm3854A0A1B0GSS6 Pcdhac2-201ENSMUST00000047479 5888 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Gm3854A0A1B0GSS6 Gm15952-201ENSMUST00000122858 490 ntTSL 3 BASIC17.47■□□□□ 0.39
Gm3854A0A1B0GSS6 Calu-207ENSMUST00000173216 673 ntTSL 5 BASIC17.47■□□□□ 0.39
Gm3854A0A1B0GSS6 Pcyox1-206ENSMUST00000204116 546 ntTSL 5 BASIC17.47■□□□□ 0.39
Gm3854A0A1B0GSS6 AC156832.2-201ENSMUST00000216217 1295 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Gm3854A0A1B0GSS6 Gm26709-203ENSMUST00000223260 715 ntTSL 5 BASIC17.47■□□□□ 0.39
Gm3854A0A1B0GSS6 C1qbp-201ENSMUST00000078528 1175 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Gm3854A0A1B0GSS6 Spata2l-201ENSMUST00000098327 2380 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Gm3854A0A1B0GSS6 Azi2-207ENSMUST00000134433 2499 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Gm3854A0A1B0GSS6 Cnot11-201ENSMUST00000003219 3162 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Gm3854A0A1B0GSS6 Arx-201ENSMUST00000046565 2881 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Gm3854A0A1B0GSS6 Setd3-201ENSMUST00000071095 2755 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Gm3854A0A1B0GSS6 Ripk2-201ENSMUST00000037035 2692 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Gm3854A0A1B0GSS6 Itgb4-210ENSMUST00000169928 6160 ntAPPRIS P2 TSL 5 BASIC17.46■□□□□ 0.39
Gm3854A0A1B0GSS6 Zc3hav1l-201ENSMUST00000058524 6536 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Gm3854A0A1B0GSS6 Fam126a-202ENSMUST00000101513 1679 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Gm3854A0A1B0GSS6 Igf2bp2-201ENSMUST00000100052 3899 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Gm3854A0A1B0GSS6 Cyb561-201ENSMUST00000019734 2741 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Gm3854A0A1B0GSS6 Tbc1d25-201ENSMUST00000039892 2648 ntAPPRIS P3 TSL 1 (best) BASIC17.46■□□□□ 0.39
Gm3854A0A1B0GSS6 Ythdf1-201ENSMUST00000037299 3184 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Gm3854A0A1B0GSS6 Krtap1-4-201ENSMUST00000100479 593 ntAPPRIS P1 BASIC17.46■□□□□ 0.39
Gm3854A0A1B0GSS6 Sptbn4-201ENSMUST00000011895 8747 ntAPPRIS P2 TSL 1 (best) BASIC17.46■□□□□ 0.39
Gm3854A0A1B0GSS6 Kansl1l-201ENSMUST00000068168 4459 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Gm3854A0A1B0GSS6 Psme3-201ENSMUST00000019470 2664 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Gm3854A0A1B0GSS6 Gm43231-201ENSMUST00000202960 2258 ntBASIC17.46■□□□□ 0.39
Gm3854A0A1B0GSS6 Dlgap1-209ENSMUST00000140728 2173 ntAPPRIS ALT2 TSL 5 BASIC17.46■□□□□ 0.39
Gm3854A0A1B0GSS6 Psmd8-203ENSMUST00000186182 1512 ntAPPRIS P2 TSL 1 (best) BASIC17.46■□□□□ 0.39
Gm3854A0A1B0GSS6 Nfix-204ENSMUST00000109764 5476 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Gm3854A0A1B0GSS6 Fem1c-201ENSMUST00000036226 5726 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.38
Gm3854A0A1B0GSS6 Arhgef1-204ENSMUST00000117796 3508 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.38
Gm3854A0A1B0GSS6 Hmga1-204ENSMUST00000118570 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC17.46■□□□□ 0.38
Gm3854A0A1B0GSS6 Mtch2-205ENSMUST00000136872 2596 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Gm3854A0A1B0GSS6 Dmap1-201ENSMUST00000102687 1566 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Gm3854A0A1B0GSS6 Gabbr1-202ENSMUST00000172789 1460 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Gm3854A0A1B0GSS6 Sqor-201ENSMUST00000005953 1804 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Retrieved 100 of 76,532 protein–RNA pairs in 19.6 ms