Protein–RNA interactions for Protein: A0A140T8P8

Trbv17, T cell receptor beta, variable 17 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbv17A0A140T8P8 Dlgap1-207ENSMUST00000133983 7173 ntAPPRIS ALT2 TSL 1 (best) BASIC13.43□□□□□ -0.26
Trbv17A0A140T8P8 Ints8-202ENSMUST00000108318 3169 ntTSL 5 BASIC13.42□□□□□ -0.26
Trbv17A0A140T8P8 Vstm2b-203ENSMUST00000205845 1455 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Trbv17A0A140T8P8 Trim47-202ENSMUST00000106441 2192 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
Trbv17A0A140T8P8 Spata2l-202ENSMUST00000166768 2707 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Trbv17A0A140T8P8 Smarcd2-201ENSMUST00000021052 2747 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Trbv17A0A140T8P8 Rnf112-201ENSMUST00000054927 3086 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Trbv17A0A140T8P8 Gm42939-201ENSMUST00000197514 2205 ntBASIC13.42□□□□□ -0.26
Trbv17A0A140T8P8 Tomm6-202ENSMUST00000113302 749 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Trbv17A0A140T8P8 Gm11927-201ENSMUST00000118472 759 ntBASIC13.42□□□□□ -0.26
Trbv17A0A140T8P8 Gm6270-201ENSMUST00000132731 559 ntTSL 5 BASIC13.42□□□□□ -0.26
Trbv17A0A140T8P8 Moap1-202ENSMUST00000178384 1284 ntAPPRIS P1 TSL 2 BASIC13.42□□□□□ -0.26
Trbv17A0A140T8P8 Tmem42-202ENSMUST00000213514 631 ntTSL 3 BASIC13.42□□□□□ -0.26
Trbv17A0A140T8P8 Hist1h2ap-201ENSMUST00000081342 482 ntAPPRIS P1 BASIC13.42□□□□□ -0.26
Trbv17A0A140T8P8 Zfp783-201ENSMUST00000095946 670 ntBASIC13.42□□□□□ -0.26
Trbv17A0A140T8P8 Negr1-201ENSMUST00000041425 2095 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Trbv17A0A140T8P8 Mms22l-202ENSMUST00000108222 4478 ntAPPRIS P1 TSL 5 BASIC13.42□□□□□ -0.26
Trbv17A0A140T8P8 9330154J02Rik-202ENSMUST00000185960 2557 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Trbv17A0A140T8P8 Krt80-201ENSMUST00000077196 1774 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Trbv17A0A140T8P8 Vgll3-201ENSMUST00000168064 7009 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Trbv17A0A140T8P8 Orai3-201ENSMUST00000061587 1996 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Trbv17A0A140T8P8 Mzt1-201ENSMUST00000042662 2240 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Trbv17A0A140T8P8 Cox18-201ENSMUST00000048363 1333 ntAPPRIS P3 TSL 1 (best) BASIC13.41□□□□□ -0.26
Trbv17A0A140T8P8 Hhat-203ENSMUST00000128619 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
Trbv17A0A140T8P8 Magi1-202ENSMUST00000089317 7209 ntAPPRIS P3 TSL 1 (best) BASIC13.41□□□□□ -0.26
Trbv17A0A140T8P8 Ncor1-203ENSMUST00000069456 3171 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Trbv17A0A140T8P8 Gm16386-201ENSMUST00000181397 1423 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Trbv17A0A140T8P8 Kpna4-201ENSMUST00000029353 8819 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Trbv17A0A140T8P8 Pnck-202ENSMUST00000114472 1532 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Trbv17A0A140T8P8 Rabep1-201ENSMUST00000076270 5408 ntAPPRIS P2 TSL 1 (best) BASIC13.41□□□□□ -0.26
Trbv17A0A140T8P8 Zdhhc12-202ENSMUST00000102865 1165 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Trbv17A0A140T8P8 Tomm6-201ENSMUST00000113301 594 ntAPPRIS P1 TSL 2 BASIC13.41□□□□□ -0.26
Trbv17A0A140T8P8 Ankrd39-201ENSMUST00000001172 2109 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Trbv17A0A140T8P8 Gm12473-201ENSMUST00000137535 579 ntTSL 5 BASIC13.41□□□□□ -0.26
Trbv17A0A140T8P8 Aldoa-ps3-201ENSMUST00000217558 306 ntBASIC13.41□□□□□ -0.26
Trbv17A0A140T8P8 Wnt10b-205ENSMUST00000226846 1204 ntBASIC13.41□□□□□ -0.26
Trbv17A0A140T8P8 Park7-201ENSMUST00000030805 908 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Trbv17A0A140T8P8 Mtag2-201ENSMUST00000058665 714 ntBASIC13.41□□□□□ -0.26
Trbv17A0A140T8P8 Rps16-201ENSMUST00000082134 1109 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Trbv17A0A140T8P8 Ick-201ENSMUST00000009972 873 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Trbv17A0A140T8P8 Rexo1-201ENSMUST00000057910 5250 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Trbv17A0A140T8P8 Lrrc57-204ENSMUST00000102499 1961 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Trbv17A0A140T8P8 Mthfd2-201ENSMUST00000005810 2085 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Trbv17A0A140T8P8 Mark3-202ENSMUST00000084953 3365 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Trbv17A0A140T8P8 Rbm24-201ENSMUST00000037923 3086 ntAPPRIS P1 TSL 2 BASIC13.41□□□□□ -0.26
Trbv17A0A140T8P8 Crlf3-201ENSMUST00000061283 2396 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Trbv17A0A140T8P8 Hoxa1-202ENSMUST00000120363 2043 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Trbv17A0A140T8P8 Arid3c-202ENSMUST00000150809 1327 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
Trbv17A0A140T8P8 Setdb2-202ENSMUST00000111253 1774 ntTSL 2 BASIC13.4□□□□□ -0.26
Trbv17A0A140T8P8 Adgrv1-207ENSMUST00000128585 2580 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Trbv17A0A140T8P8 Sqstm1-201ENSMUST00000015981 2673 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Trbv17A0A140T8P8 Fndc4-202ENSMUST00000172435 2333 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Trbv17A0A140T8P8 Lancl2-201ENSMUST00000050077 2509 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Trbv17A0A140T8P8 Jade2-202ENSMUST00000109090 6230 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
Trbv17A0A140T8P8 Scamp4-202ENSMUST00000180350 1271 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Trbv17A0A140T8P8 Gm38285-201ENSMUST00000192928 922 ntBASIC13.4□□□□□ -0.26
Trbv17A0A140T8P8 Tmem126a-201ENSMUST00000032844 799 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Trbv17A0A140T8P8 Shank1-201ENSMUST00000107934 6477 ntAPPRIS ALT2 TSL 5 BASIC13.4□□□□□ -0.26
Trbv17A0A140T8P8 Otud7a-201ENSMUST00000058476 3483 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Trbv17A0A140T8P8 Nudt11-201ENSMUST00000103007 3036 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Trbv17A0A140T8P8 Rilpl2-201ENSMUST00000031347 1391 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Trbv17A0A140T8P8 Tlk2-201ENSMUST00000015107 3212 ntAPPRIS P3 TSL 5 BASIC13.4□□□□□ -0.26
Trbv17A0A140T8P8 Gm45606-201ENSMUST00000209836 2795 ntBASIC13.4□□□□□ -0.26
Trbv17A0A140T8P8 Dmtn-207ENSMUST00000228001 2437 ntBASIC13.4□□□□□ -0.26
Trbv17A0A140T8P8 Vegfc-201ENSMUST00000033919 2449 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Trbv17A0A140T8P8 Glg1-204ENSMUST00000169020 7021 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Trbv17A0A140T8P8 Gpr137-202ENSMUST00000099774 1434 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Trbv17A0A140T8P8 Ccdc91-201ENSMUST00000032441 2459 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Trbv17A0A140T8P8 Ncam2-202ENSMUST00000067602 3563 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Trbv17A0A140T8P8 Adcy7-203ENSMUST00000169037 5198 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Trbv17A0A140T8P8 Gm20049-201ENSMUST00000219950 730 ntBASIC13.39□□□□□ -0.27
Trbv17A0A140T8P8 Espn-211ENSMUST00000105657 1375 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Trbv17A0A140T8P8 Ptges3-202ENSMUST00000084771 1559 ntTSL 5 BASIC13.39□□□□□ -0.27
Trbv17A0A140T8P8 Mrpl39-201ENSMUST00000116584 2294 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Trbv17A0A140T8P8 Sgsm2-202ENSMUST00000081799 4873 ntAPPRIS ALT2 TSL 5 BASIC13.39□□□□□ -0.27
Trbv17A0A140T8P8 1600012H06Rik-202ENSMUST00000164837 2523 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Trbv17A0A140T8P8 Gm44832-201ENSMUST00000208849 2303 ntBASIC13.39□□□□□ -0.27
Trbv17A0A140T8P8 Bin2-204ENSMUST00000182775 1908 ntTSL 5 BASIC13.39□□□□□ -0.27
Trbv17A0A140T8P8 Tpra1-223ENSMUST00000204765 1738 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Trbv17A0A140T8P8 Cyp26c1-201ENSMUST00000073391 1747 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Trbv17A0A140T8P8 Mbip-201ENSMUST00000021416 1512 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Trbv17A0A140T8P8 Eif6-201ENSMUST00000029142 1500 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Trbv17A0A140T8P8 Atp5d-203ENSMUST00000105367 1410 ntAPPRIS P1 TSL 5 BASIC13.39□□□□□ -0.27
Trbv17A0A140T8P8 Magi1-201ENSMUST00000055224 7007 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Trbv17A0A140T8P8 Cask-201ENSMUST00000033321 4057 ntTSL 5 BASIC13.38□□□□□ -0.27
Trbv17A0A140T8P8 Fam213a-202ENSMUST00000118466 1567 ntAPPRIS ALT1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Trbv17A0A140T8P8 Mrpl15-205ENSMUST00000146665 1569 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Trbv17A0A140T8P8 Rbms1-209ENSMUST00000164147 2543 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Trbv17A0A140T8P8 Ppp4r3a-201ENSMUST00000048305 4516 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Trbv17A0A140T8P8 Runx2-204ENSMUST00000159943 2316 ntAPPRIS P3 TSL 1 (best) BASIC13.38□□□□□ -0.27
Trbv17A0A140T8P8 Csrp2-201ENSMUST00000020403 1384 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Trbv17A0A140T8P8 Paqr3-201ENSMUST00000069453 1375 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Trbv17A0A140T8P8 Bsg-202ENSMUST00000105381 1240 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Trbv17A0A140T8P8 AA465934-203ENSMUST00000177150 383 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Trbv17A0A140T8P8 Crybb1-201ENSMUST00000031286 882 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Trbv17A0A140T8P8 Hebp1-201ENSMUST00000045855 1058 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Trbv17A0A140T8P8 Rbm11-202ENSMUST00000114249 2750 ntAPPRIS ALT2 TSL 5 BASIC13.38□□□□□ -0.27
Trbv17A0A140T8P8 Gm37374-201ENSMUST00000194954 1829 ntBASIC13.38□□□□□ -0.27
Trbv17A0A140T8P8 Oxct2b-201ENSMUST00000102648 1735 ntAPPRIS P1 BASIC13.38□□□□□ -0.27
Trbv17A0A140T8P8 Icam5-201ENSMUST00000019616 2947 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Retrieved 100 of 76,532 protein–RNA pairs in 24.3 ms