Protein–RNA interactions for Protein: A0A140T8P4

Igkv3-9, Immunoglobulin kappa variable 3-9 (Fragment), mousemouse

Predictions only

Length 119 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Igkv3-9A0A140T8P4 Tsc22d1-214ENSMUST00000177207 1476 ntTSL 3 BASIC12.21□□□□□ -0.46
Igkv3-9A0A140T8P4 Dnajc1-209ENSMUST00000166495 5497 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Igkv3-9A0A140T8P4 Ssc4d-204ENSMUST00000111153 2745 ntAPPRIS P1 TSL 5 BASIC12.2□□□□□ -0.46
Igkv3-9A0A140T8P4 Rtcb-201ENSMUST00000001834 2009 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Igkv3-9A0A140T8P4 Nudt11-201ENSMUST00000103007 3036 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Igkv3-9A0A140T8P4 Whrn-206ENSMUST00000102867 4013 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Igkv3-9A0A140T8P4 Kmt5b-208ENSMUST00000113977 6002 ntAPPRIS P3 TSL 5 BASIC12.2□□□□□ -0.46
Igkv3-9A0A140T8P4 Nsmf-205ENSMUST00000114386 2685 ntTSL 5 BASIC12.2□□□□□ -0.46
Igkv3-9A0A140T8P4 Gm44832-201ENSMUST00000208849 2303 ntBASIC12.2□□□□□ -0.46
Igkv3-9A0A140T8P4 Map1lc3b-204ENSMUST00000181826 2633 ntBASIC12.2□□□□□ -0.46
Igkv3-9A0A140T8P4 Fam20c-201ENSMUST00000026972 3582 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Igkv3-9A0A140T8P4 1700030C12Rik-201ENSMUST00000101462 858 ntTSL 5 BASIC12.2□□□□□ -0.46
Igkv3-9A0A140T8P4 Adamtsl5-202ENSMUST00000105352 989 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Igkv3-9A0A140T8P4 Aunip-201ENSMUST00000105866 1275 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Igkv3-9A0A140T8P4 Cacng6-201ENSMUST00000108647 868 ntTSL 5 BASIC12.2□□□□□ -0.46
Igkv3-9A0A140T8P4 Ube2b-202ENSMUST00000109086 585 ntAPPRIS P1 TSL 2 BASIC12.2□□□□□ -0.46
Igkv3-9A0A140T8P4 Gm15039-201ENSMUST00000118914 875 ntBASIC12.2□□□□□ -0.46
Igkv3-9A0A140T8P4 Coro1a-209ENSMUST00000173108 1170 ntTSL 5 BASIC12.2□□□□□ -0.46
Igkv3-9A0A140T8P4 Gm7075-201ENSMUST00000054760 425 ntAPPRIS P1 BASIC12.2□□□□□ -0.46
Igkv3-9A0A140T8P4 Hist2h2ac-201ENSMUST00000090782 520 ntAPPRIS P1 BASIC12.2□□□□□ -0.46
Igkv3-9A0A140T8P4 Slc35g1-201ENSMUST00000054098 3471 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Igkv3-9A0A140T8P4 Txndc5-201ENSMUST00000035988 2843 ntAPPRIS P3 TSL 1 (best) BASIC12.2□□□□□ -0.46
Igkv3-9A0A140T8P4 Slc25a32-201ENSMUST00000022908 5905 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Igkv3-9A0A140T8P4 Gm45844-202ENSMUST00000209325 2450 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Igkv3-9A0A140T8P4 Ldlrad4-201ENSMUST00000063775 2493 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Igkv3-9A0A140T8P4 Gm45606-201ENSMUST00000209836 2795 ntBASIC12.2□□□□□ -0.46
Igkv3-9A0A140T8P4 Herpud2-201ENSMUST00000008573 2781 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Igkv3-9A0A140T8P4 Eml1-203ENSMUST00000109860 4160 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Igkv3-9A0A140T8P4 Flg-201ENSMUST00000050758 1488 ntBASIC12.2□□□□□ -0.46
Igkv3-9A0A140T8P4 Henmt1-202ENSMUST00000098680 1466 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Igkv3-9A0A140T8P4 Tsc22d2-201ENSMUST00000099090 9799 ntAPPRIS P3 TSL 3 BASIC12.2□□□□□ -0.46
Igkv3-9A0A140T8P4 Sox1ot-201ENSMUST00000080795 5064 ntTSL 5 BASIC12.19□□□□□ -0.46
Igkv3-9A0A140T8P4 Mapk9-205ENSMUST00000109179 4682 ntTSL 5 BASIC12.19□□□□□ -0.46
Igkv3-9A0A140T8P4 Mapk9-209ENSMUST00000164643 4682 ntTSL 5 BASIC12.19□□□□□ -0.46
Igkv3-9A0A140T8P4 Anapc16-201ENSMUST00000020307 1379 ntTSL 2 BASIC12.19□□□□□ -0.46
Igkv3-9A0A140T8P4 Gsto2-201ENSMUST00000056159 1351 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Igkv3-9A0A140T8P4 Cacnb4-201ENSMUST00000078324 8225 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Igkv3-9A0A140T8P4 Htatip2-202ENSMUST00000207895 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Igkv3-9A0A140T8P4 Agxt-201ENSMUST00000027491 1553 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Igkv3-9A0A140T8P4 Evx2-201ENSMUST00000001867 4191 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Igkv3-9A0A140T8P4 Lyl1-201ENSMUST00000037165 1800 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Igkv3-9A0A140T8P4 Il17rc-201ENSMUST00000058300 2302 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Igkv3-9A0A140T8P4 Anks1-203ENSMUST00000114842 5610 ntAPPRIS P3 TSL 1 (best) BASIC12.19□□□□□ -0.46
Igkv3-9A0A140T8P4 Prcd-201ENSMUST00000106381 724 ntTSL 3 BASIC12.19□□□□□ -0.46
Igkv3-9A0A140T8P4 Dnajc19-204ENSMUST00000120805 551 ntTSL 2 BASIC12.19□□□□□ -0.46
Igkv3-9A0A140T8P4 Atraid-201ENSMUST00000013766 966 ntAPPRIS P2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Igkv3-9A0A140T8P4 Boll-203ENSMUST00000159398 658 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Igkv3-9A0A140T8P4 Cracr2b-207ENSMUST00000170879 1158 ntAPPRIS ALT2 TSL 5 BASIC12.19□□□□□ -0.46
Igkv3-9A0A140T8P4 1700067K01Rik-203ENSMUST00000172548 986 ntAPPRIS P2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Igkv3-9A0A140T8P4 Gm8969-201ENSMUST00000199694 526 ntBASIC12.19□□□□□ -0.46
Igkv3-9A0A140T8P4 Krtcap3-205ENSMUST00000201625 902 ntAPPRIS P1 TSL 5 BASIC12.19□□□□□ -0.46
Igkv3-9A0A140T8P4 Timp4-202ENSMUST00000205131 945 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Igkv3-9A0A140T8P4 Gm44549-201ENSMUST00000208351 577 ntBASIC12.19□□□□□ -0.46
Igkv3-9A0A140T8P4 Cldn3-201ENSMUST00000094245 1259 ntAPPRIS P1 BASIC12.19□□□□□ -0.46
Igkv3-9A0A140T8P4 Mef2d-202ENSMUST00000107558 1767 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Igkv3-9A0A140T8P4 Pick1-201ENSMUST00000018295 1977 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Igkv3-9A0A140T8P4 Fgf22-202ENSMUST00000219228 2167 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Igkv3-9A0A140T8P4 Lysmd4-209ENSMUST00000208998 2110 ntAPPRIS P2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Igkv3-9A0A140T8P4 Cbl-201ENSMUST00000037644 4901 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Igkv3-9A0A140T8P4 Hip1r-201ENSMUST00000000939 6735 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Igkv3-9A0A140T8P4 Slc9a5-201ENSMUST00000073149 3499 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Igkv3-9A0A140T8P4 Ciz1-201ENSMUST00000048964 2771 ntAPPRIS P3 TSL 1 (best) BASIC12.18□□□□□ -0.46
Igkv3-9A0A140T8P4 Ythdc1-202ENSMUST00000119339 3222 ntAPPRIS ALT2 TSL 5 BASIC12.18□□□□□ -0.46
Igkv3-9A0A140T8P4 Rnpc3-203ENSMUST00000106536 1839 ntAPPRIS P3 TSL 1 (best) BASIC12.18□□□□□ -0.46
Igkv3-9A0A140T8P4 Hspa1l-201ENSMUST00000007248 2472 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Igkv3-9A0A140T8P4 Naa50-204ENSMUST00000161326 4487 ntAPPRIS ALT1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Igkv3-9A0A140T8P4 Prdm6-203ENSMUST00000115399 2227 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Igkv3-9A0A140T8P4 Ddit4-201ENSMUST00000020308 1755 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Igkv3-9A0A140T8P4 Isca1-201ENSMUST00000057115 1942 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Igkv3-9A0A140T8P4 Tpsg1-204ENSMUST00000160920 867 ntTSL 3 BASIC12.18□□□□□ -0.46
Igkv3-9A0A140T8P4 Gm9780-201ENSMUST00000184272 350 ntTSL 2 BASIC12.18□□□□□ -0.46
Igkv3-9A0A140T8P4 Gm42882-201ENSMUST00000201788 506 ntTSL 3 BASIC12.18□□□□□ -0.46
Igkv3-9A0A140T8P4 Rab3c-203ENSMUST00000224180 967 ntBASIC12.18□□□□□ -0.46
Igkv3-9A0A140T8P4 Nat8-201ENSMUST00000032073 1123 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Igkv3-9A0A140T8P4 Lsm6-201ENSMUST00000051867 2107 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Igkv3-9A0A140T8P4 Gm9970-201ENSMUST00000068997 558 ntAPPRIS P1 BASIC12.18□□□□□ -0.46
Igkv3-9A0A140T8P4 Selenom-201ENSMUST00000094469 707 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Igkv3-9A0A140T8P4 Fam98b-201ENSMUST00000028825 1861 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Igkv3-9A0A140T8P4 Wnt6-201ENSMUST00000006716 2071 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Igkv3-9A0A140T8P4 Mtx1-201ENSMUST00000073572 1617 ntAPPRIS P2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Igkv3-9A0A140T8P4 U2af2-202ENSMUST00000165399 1810 ntTSL 5 BASIC12.18□□□□□ -0.46
Igkv3-9A0A140T8P4 Rab1b-201ENSMUST00000025804 1835 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Igkv3-9A0A140T8P4 Hnrnph3-201ENSMUST00000020263 2213 ntAPPRIS P3 TSL 5 BASIC12.18□□□□□ -0.46
Igkv3-9A0A140T8P4 9330111N05Rik-202ENSMUST00000181043 2449 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Igkv3-9A0A140T8P4 Por-201ENSMUST00000005651 2636 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Igkv3-9A0A140T8P4 9330154J02Rik-202ENSMUST00000185960 2557 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Igkv3-9A0A140T8P4 Pou2f2-205ENSMUST00000108417 1937 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Igkv3-9A0A140T8P4 Elmo2-204ENSMUST00000103088 3052 ntAPPRIS ALT2 TSL 5 BASIC12.17□□□□□ -0.46
Igkv3-9A0A140T8P4 Sirt7-201ENSMUST00000080202 1727 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Igkv3-9A0A140T8P4 Gm16897-201ENSMUST00000180780 2492 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Igkv3-9A0A140T8P4 Smim15-205ENSMUST00000225972 2097 ntAPPRIS P1 BASIC12.17□□□□□ -0.46
Igkv3-9A0A140T8P4 Camkk2-211ENSMUST00000200109 2751 ntAPPRIS P3 TSL 1 (best) BASIC12.17□□□□□ -0.46
Igkv3-9A0A140T8P4 Otud7a-201ENSMUST00000058476 3483 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Igkv3-9A0A140T8P4 Zdhhc12-202ENSMUST00000102865 1165 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Igkv3-9A0A140T8P4 Gm12933-201ENSMUST00000120203 872 ntBASIC12.17□□□□□ -0.46
Igkv3-9A0A140T8P4 Josd2-205ENSMUST00000120852 727 ntAPPRIS P1 TSL 3 BASIC12.17□□□□□ -0.46
Igkv3-9A0A140T8P4 Bnip1-201ENSMUST00000015725 1085 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Igkv3-9A0A140T8P4 Gm20390-201ENSMUST00000170303 991 ntAPPRIS P1 TSL 5 BASIC12.17□□□□□ -0.46
Igkv3-9A0A140T8P4 Prrg2-201ENSMUST00000007981 1295 ntAPPRIS P2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Igkv3-9A0A140T8P4 Rtl8b-201ENSMUST00000088778 1232 ntAPPRIS P1 BASIC12.17□□□□□ -0.46
Retrieved 100 of 76,532 protein–RNA pairs in 18.5 ms